RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 RPRMQ9NS64 109 aa8□□□□□ -1.13
SS18-207ENST00000577636 PLA2G2EQ9NZK7 142 aa8□□□□□ -1.13
SS18-207ENST00000577636 PITPNC1Q9UKF7 332 aa8□□□□□ -1.13
SS18-207ENST00000577636 CTXND1A0A1B0GTU2 59 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 A0A1B0GV50 99 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 CGB1A6NKQ9 187 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 E7EUB6 86 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 FCN1O00602 326 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 SCGB2A1O75556 95 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 REG1AP05451 166 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 FABP1P07148 127 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 CD28P10747 220 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 TAGLN2P37802 199 aaKnown RBP7.99□□□□□ -1.13
SS18-207ENST00000577636 RPL29P47914 159 aaKnown RBP7.99□□□□□ -1.13
SS18-207ENST00000577636 MRGPRG-AS1Q2M3A8 158 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 MBD3L1Q8WWY6 194 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 SMDT1Q9H4I9 107 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 THYN1Q9P016 225 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 F11RQ9Y624 299 aaKnown RBP7.99□□□□□ -1.13
SS18-207ENST00000577636 PXMP4Q9Y6I8 212 aa7.99□□□□□ -1.13
SS18-207ENST00000577636 NBEAL2Q6ZNJ1 2754 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 MAP1LC3B2A6NCE7 125 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 ZFP92A6NM28 416 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 TEX22C9J3V5 150 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 M0QZK8 103 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 HLA-DRB1P01911 266 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 AREGP15514 252 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 IGLL1P15814 213 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 CD33P20138 364 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 CDC34P49427 236 aaPredicted RBP7.98□□□□□ -1.13
SS18-207ENST00000577636 PPT1P50897 306 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 B2MP61769 119 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 SELENOTP62341 195 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 CX3CL1P78423 397 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 GAMTQ14353 236 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 GUK1Q16774 197 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 FAM122CQ6P4D5 195 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 LCN15Q6UWW0 184 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 BPIFCQ8NFQ6 507 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 TMEM68Q96MH6 324 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 MGST2Q99735 147 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 GGTLC1Q9BX51 225 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 MAP1LC3BQ9GZQ8 125 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 MEGF9Q9H1U4 602 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 MOB4Q9Y3A3 225 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 LSM4Q9Y4Z0 139 aaKnown RBP7.98□□□□□ -1.13
SS18-207ENST00000577636 RFNGQ9Y644 331 aa7.98□□□□□ -1.13
SS18-207ENST00000577636 KMT2CQ8NEZ4 4911 aaKnown RBP7.97□□□□□ -1.13
SS18-207ENST00000577636 A0A1B0GW64 132 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 A0A1W2PRX2 142 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 TMEM218A2RU14 115 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 RBFOX3A6NFN3 312 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 NPIPB5A8MRT5 1133 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 APELAP0DMC3 54 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 HIST1H1BP16401 226 aaKnown RBP7.97□□□□□ -1.13
SS18-207ENST00000577636 RHOBP62745 196 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 ACSM6Q6P461 480 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 IQCF2Q8IXL9 164 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 STPG3Q8N7X2 389 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 OR4F17Q8NGA8 305 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 RCC1LQ96I51 464 aaKnown RBP7.97□□□□□ -1.13
SS18-207ENST00000577636 AJUBAQ96IF1 538 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 OR4F4Q96R69 305 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 RNF2Q99496 336 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 SLC25A33Q9BSK2 321 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 WNT10AQ9GZT5 417 aa7.97□□□□□ -1.13
SS18-207ENST00000577636 F8W036 122 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 K7EIL1 84 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 OR10J1P30954 320 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 RND2P52198 227 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 MIC13Q5XKP0 118 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 PVRIGQ6DKI7 326 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 CYP2G1PQ6ZSU1 146 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 C16orf82Q7Z2V1 217 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 CCDC28AQ8IWP9 274 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 RPP25LQ8N5L8 163 aaKnown RBP7.96□□□□□ -1.14
SS18-207ENST00000577636 Q8N9W7 124 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 OR1L4Q8NGR5 311 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 NPIPB3Q92617 1050 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 RBM14Q96PK6 669 aaKnown RBP7.96□□□□□ -1.14
SS18-207ENST00000577636 PFDN5Q99471 154 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 CITED2Q99967 270 aaPredicted RBP7.96□□□□□ -1.14
SS18-207ENST00000577636 NPFFR1Q9GZQ6 430 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 VSIRQ9H7M9 311 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 SLC25A22Q9H936 323 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 GNG13Q9P2W3 67 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 SLC45A2Q9UMX9 530 aa7.96□□□□□ -1.14
SS18-207ENST00000577636 NOTCH3Q9UM47 2321 aa7.95□□□□□ -1.14
SS18-207ENST00000577636 TCRBV4S1A1TA0A5B7 111 aa7.95□□□□□ -1.14
SS18-207ENST00000577636 SEC14L6B5MCN3 397 aa7.95□□□□□ -1.14
SS18-207ENST00000577636 APOC3P02656 99 aa7.95□□□□□ -1.14
SS18-207ENST00000577636 CD5P06127 495 aa7.95□□□□□ -1.14
SS18-207ENST00000577636 CRYGCP07315 174 aa7.95□□□□□ -1.14
SS18-207ENST00000577636 SFTA3P0C7M3 94 aa7.95□□□□□ -1.14
SS18-207ENST00000577636 CTRB1P17538 263 aa7.95□□□□□ -1.14
SS18-207ENST00000577636 NPBWR1P48145 328 aa7.95□□□□□ -1.14
SS18-207ENST00000577636 PSMB3P49720 205 aa7.95□□□□□ -1.14
SS18-207ENST00000577636 TAS2R45P59539 299 aa7.95□□□□□ -1.14
SS18-207ENST00000577636 DEFA5Q01523 94 aa7.95□□□□□ -1.14
SS18-207ENST00000577636 HAGHQ16775 308 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms