RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SPRY3O43610 288 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 VDAC2P45880 294 aaPredicted RBP11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 FAM27E3Q08E93 113 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 SPINK9Q5DT21 86 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 AP1S3Q96PC3 154 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 PSG11Q9UQ72 335 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 DIDO1Q9BTC0 2240 aaKnown RBP11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 DEFB108AA8MXU0 73 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 H3BRM9 83 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 K7EP34 96 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 LHBP01229 141 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 GATA2P23769 480 aaPredicted RBP11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 LGALS7P47929 136 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 CR1LQ2VPA4 569 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 SPATA31B1PQ5VZV4 182 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 C22orf34Q6ZV56 151 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 OR5A1Q8NGJ0 315 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 OR2T6Q8NHC8 308 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 PPP1R35Q8TAP8 253 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 ITLN1Q8WWA0 313 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 TMEM186Q96B77 213 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 SMPXQ9UHP9 88 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 SH3BGRL2Q9UJC5 107 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 ZNF835Q9Y2P0 537 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 MGAQ8IWI9 3026 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 TRGV8A0A0C4DH27 118 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 A0A1W2PRE2 83 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 C9orf118A6NHY6 69 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 MGST1P10620 155 aaKnown RBP11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 MFAP2P55001 183 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 PRR20EP86478 221 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 PRR20CP86479 221 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 PRR20DP86480 221 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 PRR20BP86481 221 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 PRR20AP86496 221 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 NHLH1Q02575 133 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 C5orf17Q8NAS9 161 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 C19orf24Q9BVV8 132 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 HEYLQ9NQ87 328 aaPredicted RBP11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 CLEC5AQ9NY25 188 aa11.36□□□□□ -0.59
RABGGTA-220ENST00000560998 hDV102S1A0JD36 115 aa11.35□□□□□ -0.59
RABGGTA-220ENST00000560998 A6NDN8 102 aa11.35□□□□□ -0.59
RABGGTA-220ENST00000560998 LINC00473A8K010 186 aa11.35□□□□□ -0.59
RABGGTA-220ENST00000560998 FOXH1O75593 365 aa11.35□□□□□ -0.59
RABGGTA-220ENST00000560998 LEPROTL1O95214 131 aa11.35□□□□□ -0.59
RABGGTA-220ENST00000560998 GATA4P43694 442 aa11.35□□□□□ -0.59
RABGGTA-220ENST00000560998 TAS2R45P59539 299 aa11.35□□□□□ -0.59
RABGGTA-220ENST00000560998 RPL8P62917 257 aaKnown RBP11.35□□□□□ -0.59
RABGGTA-220ENST00000560998 PSG5Q15238 335 aa11.35□□□□□ -0.59
RABGGTA-220ENST00000560998 LTC4SQ16873 150 aa11.35□□□□□ -0.59
RABGGTA-220ENST00000560998 KIR3DL3Q8N743 410 aa11.35□□□□□ -0.59
RABGGTA-220ENST00000560998 NHLRC2Q8NBF2 726 aa11.35□□□□□ -0.59
RABGGTA-220ENST00000560998 SSMEM1Q8WWF3 244 aa11.35□□□□□ -0.59
RABGGTA-220ENST00000560998 CUL9Q8IWT3 2517 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 GFRA3O60609 400 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 LIPFP07098 398 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 COX8AP10176 69 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 CD40P25942 277 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 ZNRF1Q8ND25 227 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 OR4A16Q8NH70 328 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 FAM216AQ8WUB2 273 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 ABHD17AQ96GS6 310 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 MAP1LC3CQ9BXW4 147 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 JPT1Q9UK76 154 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 SOX21Q9Y651 276 aaPredicted RBP11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 ANKRD11Q6UB99 2663 aaPredicted RBP11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 IGHV1-24A0A0C4DH33 117 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 A0A1B0GV72 72 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 FAM231BA6NCW3 169 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 PRSS47A8MTI9 375 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 OR9G9P0C7N8 305 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 HTR1DP28221 377 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 GPR12P47775 334 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 LINC00205P59089 165 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 BPIFA4PQ86YQ2 179 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 NUP35Q8NFH5 326 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 FAM222BQ8WU58 562 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 DPF1Q92782 380 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 C1orf159Q96HA4 380 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 URB1-AS1Q96HZ7 61 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 PLEKHA3Q9HB20 300 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 GNG12Q9UBI6 72 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 SSUH2Q9Y2M2 353 aa11.34□□□□□ -0.59
RABGGTA-220ENST00000560998 A0A0G2JNJ9 132 aa11.33□□□□□ -0.6
RABGGTA-220ENST00000560998 A0A1B0GXF2 115 aa11.33□□□□□ -0.6
RABGGTA-220ENST00000560998 F2RL2O00254 374 aa11.33□□□□□ -0.6
RABGGTA-220ENST00000560998 DUTP33316 252 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-220ENST00000560998 TMEM97Q5BJF2 176 aa11.33□□□□□ -0.6
RABGGTA-220ENST00000560998 PRAMEF5Q5TYX0 476 aa11.33□□□□□ -0.6
RABGGTA-220ENST00000560998 GDF5OSQ5U4N7 250 aa11.33□□□□□ -0.6
RABGGTA-220ENST00000560998 MIR17HGQ75NE6 70 aa11.33□□□□□ -0.6
RABGGTA-220ENST00000560998 ASCL5Q7RTU5 278 aa11.33□□□□□ -0.6
RABGGTA-220ENST00000560998 H1FXQ92522 213 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-220ENST00000560998 Q9UFV3 132 aa11.33□□□□□ -0.6
RABGGTA-220ENST00000560998 HSPB8Q9UJY1 196 aa11.33□□□□□ -0.6
RABGGTA-220ENST00000560998 DSCAMO60469 2012 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 GGTLC3B5MD39 225 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 PRRG2O14669 202 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 PROP1O75360 226 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 IGHV1-46P01743 117 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms