RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 ARL6Q9H0F7 186 aa9.22□□□□□ -0.93
DDB1-223ENST00000543658 PEF1Q9UBV8 284 aaKnown RBP9.22□□□□□ -0.93
DDB1-223ENST00000543658 C17orf112F2Z3M2 114 aa9.21□□□□□ -0.94
DDB1-223ENST00000543658 TGOLN2O43493 480 aa9.21□□□□□ -0.94
DDB1-223ENST00000543658 CLEC3BP05452 202 aa9.21□□□□□ -0.94
DDB1-223ENST00000543658 FGF7P21781 194 aa9.21□□□□□ -0.94
DDB1-223ENST00000543658 FCGR2BP31994 310 aaPredicted RBP9.21□□□□□ -0.94
DDB1-223ENST00000543658 RELQ04864 619 aaPredicted RBP9.21□□□□□ -0.94
DDB1-223ENST00000543658 RPEL1Q2QD12 228 aa9.21□□□□□ -0.94
DDB1-223ENST00000543658 TCTEX1D4Q5JR98 221 aa9.21□□□□□ -0.94
DDB1-223ENST00000543658 KCNRGQ8N5I3 272 aa9.21□□□□□ -0.94
DDB1-223ENST00000543658 PPP1R14BQ96C90 147 aa9.21□□□□□ -0.94
DDB1-223ENST00000543658 CCDC140Q96MF4 163 aa9.21□□□□□ -0.94
DDB1-223ENST00000543658 PPP5D1E7EU14 171 aa9.2□□□□□ -0.94
DDB1-223ENST00000543658 BCL2L11O43521 198 aa9.2□□□□□ -0.94
DDB1-223ENST00000543658 GGCTO75223 188 aaKnown RBP9.2□□□□□ -0.94
DDB1-223ENST00000543658 MPDU1O75352 247 aa9.2□□□□□ -0.94
DDB1-223ENST00000543658 HSPB1P04792 205 aaKnown RBP9.2□□□□□ -0.94
DDB1-223ENST00000543658 ZP3P21754 424 aa9.2□□□□□ -0.94
DDB1-223ENST00000543658 EIF5AP63241 154 aaKnown RBP9.2□□□□□ -0.94
DDB1-223ENST00000543658 VWC2Q2TAL6 325 aa9.2□□□□□ -0.94
DDB1-223ENST00000543658 BTNL8Q6UX41 500 aa9.2□□□□□ -0.94
DDB1-223ENST00000543658 TREML4Q6UXN2 200 aa9.2□□□□□ -0.94
DDB1-223ENST00000543658 C8orf86Q6ZUL3 223 aa9.2□□□□□ -0.94
DDB1-223ENST00000543658 TMUB2Q71RG4 321 aa9.2□□□□□ -0.94
DDB1-223ENST00000543658 ZNF709Q8N972 641 aa9.2□□□□□ -0.94
DDB1-223ENST00000543658 CITED1Q99966 193 aa9.2□□□□□ -0.94
DDB1-223ENST00000543658 ZNF747Q9BV97 191 aa9.2□□□□□ -0.94
DDB1-223ENST00000543658 KCNIP2Q9NS61 270 aa9.2□□□□□ -0.94
DDB1-223ENST00000543658 MRPL36Q9P0J6 103 aaKnown RBP9.2□□□□□ -0.94
DDB1-223ENST00000543658 LINC01619G3V211 115 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 I3L521 148 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 JTBO76095 146 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 PF4P02776 101 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 CXCL2P19875 107 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 NKX2-5P52952 324 aaPredicted RBP9.19□□□□□ -0.94
DDB1-223ENST00000543658 KRTAP10-3P60369 221 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 RUNX1Q01196 453 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 ZNF616Q08AN1 781 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 KIAA0141Q14154 515 aaPredicted RBP9.19□□□□□ -0.94
DDB1-223ENST00000543658 TIGITQ495A1 244 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 HIST2H2BDQ6DRA6 164 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 SHISA2Q6UWI4 295 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 ZNF600Q6ZNG1 722 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 THAP8Q8NA92 274 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 OR11H1Q8NG94 326 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 OR4F17Q8NGA8 305 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 OR4F4Q96R69 305 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 TRGV9Q99603 122 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 ZNF471Q9BX82 626 aaPredicted RBP9.19□□□□□ -0.94
DDB1-223ENST00000543658 WDR83OSQ9Y284 106 aa9.19□□□□□ -0.94
DDB1-223ENST00000543658 SETD2Q9BYW2 2564 aaPredicted RBP9.19□□□□□ -0.94
DDB1-223ENST00000543658 IGHV4OR15-8A0A075B7B6 117 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 A0A087WW49 117 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 BOLA2-SMG1P6H3BVE0 249 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 YIF1AO95070 293 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 IGLC1P0CG04 106 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 CAMLGP49069 296 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 SELENOTP62341 195 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 DEFB136Q30KP8 78 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 FAM106AQ4KMX7 169 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 CYP2G1PQ6ZSU1 146 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 C18orf65Q6ZTR6 163 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 BPIFCQ8NFQ6 507 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 OR1N2Q8NGR9 330 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 Q8WTZ3 238 aa9.18□□□□□ -0.94
DDB1-223ENST00000543658 PARD6GQ9BYG4 376 aaPredicted RBP9.18□□□□□ -0.94
DDB1-223ENST00000543658 WDR61Q9GZS3 305 aaKnown RBP9.18□□□□□ -0.94
DDB1-223ENST00000543658 IGHV3-35A0A0C4DH35 117 aa9.17□□□□□ -0.94
DDB1-223ENST00000543658 F8W735 103 aaPredicted RBP9.17□□□□□ -0.94
DDB1-223ENST00000543658 CCL24O00175 119 aa9.17□□□□□ -0.94
DDB1-223ENST00000543658 BMPR1BO00238 502 aa9.17□□□□□ -0.94
DDB1-223ENST00000543658 AGPAT2O15120 278 aa9.17□□□□□ -0.94
DDB1-223ENST00000543658 TOMM40O96008 361 aa9.17□□□□□ -0.94
DDB1-223ENST00000543658 CFDP00746 253 aaPredicted RBP9.17□□□□□ -0.94
DDB1-223ENST00000543658 TRBV12-3P01733 135 aa9.17□□□□□ -0.94
DDB1-223ENST00000543658 RD3LP0DJH9 198 aa9.17□□□□□ -0.94
DDB1-223ENST00000543658 YPEL3P61236 119 aaPredicted RBP9.17□□□□□ -0.94
DDB1-223ENST00000543658 LGALSLQ3ZCW2 172 aaPredicted RBP9.17□□□□□ -0.94
DDB1-223ENST00000543658 RPL7L1Q6DKI1 246 aaKnown RBP9.17□□□□□ -0.94
DDB1-223ENST00000543658 C9orf62Q8N4C0 152 aa9.17□□□□□ -0.94
DDB1-223ENST00000543658 HSD17B11Q8NBQ5 300 aa9.17□□□□□ -0.94
DDB1-223ENST00000543658 CHRDL1Q9BU40 450 aa9.17□□□□□ -0.94
DDB1-223ENST00000543658 NPCDR1Q9BY65 106 aa9.17□□□□□ -0.94
DDB1-223ENST00000543658 M0QZ24 198 aa9.16□□□□□ -0.94
DDB1-223ENST00000543658 NDUFA4O00483 81 aa9.16□□□□□ -0.94
DDB1-223ENST00000543658 OR2C1O95371 312 aa9.16□□□□□ -0.94
DDB1-223ENST00000543658 CTSGP08311 255 aa9.16□□□□□ -0.94
DDB1-223ENST00000543658 TPT1P13693 172 aaKnown RBP9.16□□□□□ -0.94
DDB1-223ENST00000543658 S100A7P31151 101 aa9.16□□□□□ -0.94
DDB1-223ENST00000543658 MYCNOSP40205 109 aa9.16□□□□□ -0.94
DDB1-223ENST00000543658 LYZP61626 148 aa9.16□□□□□ -0.94
DDB1-223ENST00000543658 OPCMLQ14982 345 aa9.16□□□□□ -0.94
DDB1-223ENST00000543658 Q6ZRG5 221 aa9.16□□□□□ -0.94
DDB1-223ENST00000543658 S100A7AQ86SG5 101 aa9.16□□□□□ -0.94
DDB1-223ENST00000543658 OR51G1Q8NGK1 321 aa9.16□□□□□ -0.94
DDB1-223ENST00000543658 GNPNAT1Q96EK6 184 aaPredicted RBP9.16□□□□□ -0.94
DDB1-223ENST00000543658 DUX3Q96PT4 197 aa9.16□□□□□ -0.94
DDB1-223ENST00000543658 MGST2Q99735 147 aa9.16□□□□□ -0.94
DDB1-223ENST00000543658 GINS3Q9BRX5 216 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms