RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 A0A1B0GWB2 263 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 H3BMG7 143 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 K7ERJ3 54 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 CGAP01215 116 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 SMIM13P0DJ93 91 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 GUSBP1Q15486 140 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 TMEM42Q69YG0 159 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 FOXI2Q6ZQN5 318 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 CXorf67Q86X51 503 aaPredicted RBP9.29□□□□□ -0.92
CDH4-201ENST00000543233 CNEP1R1Q8N9A8 125 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 RAB1CQ92928 201 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 TMEM147Q9BVK8 224 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 C1QTNF5Q9BXJ0 243 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 NPCDR1Q9BY65 106 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 MS4A6AQ9H2W1 248 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 ZNF292O60281 2723 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 A1L4Q6 167 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 CENPWQ5EE01 88 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 DEFB124Q8NES8 71 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 GCM1Q9NP62 436 aa9.29□□□□□ -0.92
CDH4-201ENST00000543233 VWC2LB2RUY7 222 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 GNG3P63215 75 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 RTL8BQ17RB0 113 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 AMTNQ6UX39 209 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 DDB2Q92466 427 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 LSM4Q9Y4Z0 139 aaKnown RBP9.28□□□□□ -0.92
CDH4-201ENST00000543233 PKDREJQ9NTG1 2253 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 TRGV10A0A0A0MS01 117 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 APOMO95445 188 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 TIGITQ495A1 244 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 SPINK9Q5DT21 86 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 MDP1Q86V88 176 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 MKXQ8IYA7 352 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 NHLRC2Q8NBF2 726 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 GGTLC1Q9BX51 225 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 RAB1BQ9H0U4 201 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 FZR1Q9UM11 496 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 ATP23Q9Y6H3 246 aa9.28□□□□□ -0.92
CDH4-201ENST00000543233 INTS1Q8N201 2190 aaKnown RBP9.28□□□□□ -0.92
CDH4-201ENST00000543233 PLCE1Q9P212 2302 aa9.27□□□□□ -0.92
CDH4-201ENST00000543233 A0A1W2PRE2 83 aa9.27□□□□□ -0.92
CDH4-201ENST00000543233 IGHV3-7P01780 117 aa9.27□□□□□ -0.92
CDH4-201ENST00000543233 CD24P25063 80 aa9.27□□□□□ -0.92
CDH4-201ENST00000543233 GPR12P47775 334 aa9.27□□□□□ -0.92
CDH4-201ENST00000543233 TRIP6Q15654 476 aaKnown RBP9.27□□□□□ -0.92
CDH4-201ENST00000543233 ZNF766Q5HY98 468 aa9.27□□□□□ -0.92
CDH4-201ENST00000543233 TEX45Q8NA69 505 aa9.27□□□□□ -0.92
CDH4-201ENST00000543233 GRAMD2BQ96HH9 432 aa9.27□□□□□ -0.92
CDH4-201ENST00000543233 SPRR3Q9UBC9 169 aa9.27□□□□□ -0.92
CDH4-201ENST00000543233 OR2W1Q9Y3N9 320 aa9.27□□□□□ -0.92
CDH4-201ENST00000543233 ANKRD11Q6UB99 2663 aaPredicted RBP9.27□□□□□ -0.93
CDH4-201ENST00000543233 TRGV5A0A0B4J1U4 118 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 IGHV1-24A0A0C4DH33 117 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 C21orf140B9A014 251 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 CSN3P07498 182 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 KIR2DL2P43627 348 aaPredicted RBP9.27□□□□□ -0.93
CDH4-201ENST00000543233 TAS2R45P59539 299 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 DAZAP2Q15038 168 aaPredicted RBP9.27□□□□□ -0.93
CDH4-201ENST00000543233 ZNF585BQ52M93 769 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 IBA57Q5T440 356 aaKnown RBP9.27□□□□□ -0.93
CDH4-201ENST00000543233 PRDM14Q9GZV8 571 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 ZNF391Q9UJN7 358 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 AKAP13Q12802 2813 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 TRBV20-1A0A075B6N2 111 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 TFF1P04155 84 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 NMUP48645 174 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 C20orf204Q6ZNR8 217 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 KLF13Q9Y2Y9 288 aaPredicted RBP9.27□□□□□ -0.93
CDH4-201ENST00000543233 DMXL2Q8TDJ6 3036 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 USF3Q68DE3 2245 aa9.27□□□□□ -0.93
CDH4-201ENST00000543233 H0Y980 276 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 PGLYRP1O75594 196 aaPredicted RBP9.26□□□□□ -0.93
CDH4-201ENST00000543233 GRPP07492 148 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 ZNF883P0CG24 379 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 F2RP25116 425 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 ADTRPQ96IZ2 230 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 PPDPFQ9H3Y8 114 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 YTHDF2Q9Y5A9 579 aaKnown RBP9.26□□□□□ -0.93
CDH4-201ENST00000543233 IGKV3D-15A0A087WSY6 115 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 LRRC30A6NM36 301 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 PRR33A8MZF0 331 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 K7EMI3 77 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 PRTN3P24158 256 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 XGP55808 180 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 TEX29Q8N6K0 151 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 OR4A16Q8NH70 328 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 GLMPQ8WWB7 406 aa9.26□□□□□ -0.93
CDH4-201ENST00000543233 SMG1Q96Q15 3661 aaKnown RBP9.26□□□□□ -0.93
CDH4-201ENST00000543233 PRSS29PA6NIE9 313 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 F8W1H4 67 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 ZNF138P52744 262 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 ZFAND6Q6FIF0 208 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 TRAT1Q6PIZ9 186 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 Q6ZSR3 168 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 Q6ZUT4 128 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 TTC9CQ8N5M4 171 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 TRIB1Q96RU8 372 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 PIEZO1Q92508 2521 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 G6PCP35575 357 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 NHP2Q9NX24 153 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms