RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 CEBPZOSA8MTT3 80 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 F6UZH7 168 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 CCL24O00175 119 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 PHOX2AO14813 284 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 PDE6DO43924 150 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 HRASP01112 189 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 GALR1P47211 349 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 ERVFC1-1P60608 527 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 C21orf62-AS1Q17RA5 79 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 ZNF343Q6P1L6 599 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 C10orf99Q6UWK7 81 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 ZNF66Q6ZN08 573 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 SBSPONQ8IVN8 264 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 ODF3L1Q8IXM7 274 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 TMEM217Q8N7C4 229 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 ZNF709Q8N972 641 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 OR51G1Q8NGK1 321 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 OR4X1Q8NH49 305 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 ZNF596Q8TC21 504 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 NEK7Q8TDX7 302 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 ZNF714Q96N38 554 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 PRR25Q96S07 402 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 HIST1H2BLQ99880 126 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 ABHD14AQ9BUJ0 271 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 MAP1LC3BQ9GZQ8 125 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 ZNF256Q9Y2P7 627 aaPredicted RBP4.69□□□□□ -1.66
CPSF7-219ENST00000539952 URGCP-MRPS24S4R325 110 aa4.69□□□□□ -1.66
CPSF7-219ENST00000539952 SORL1Q92673 2214 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 IGHV2-26A0A0B4J1V2 119 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 XKRY2A2RUG3 117 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 M0R143 59 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 MPDU1O75352 247 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 AMY1AP04745 511 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 SCTP09683 121 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 FAM106CPP0CH98 169 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 GZMBP10144 247 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 OR10J1P30954 320 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 CEACAM3P40198 252 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 CATR1Q13166 79 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 USF2Q15853 346 aaPredicted RBP4.68□□□□□ -1.66
CPSF7-219ENST00000539952 ZNF124Q15973 351 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 TEX38Q6PEX7 206 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 TMEM14EPQ6UXP3 125 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 ZNF329Q86UD4 541 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 FAM58AQ8N1B3 248 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 ABHD12Q8N2K0 398 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 KLHL30-AS1Q8NEE0 82 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 OR10P1Q8NGE3 313 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 MISP3Q96FF7 219 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 SNX22Q96L94 193 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 TMEM147Q9BVK8 224 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 CLEC7AQ9BXN2 247 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 TMEM133Q9H2Q1 129 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.68□□□□□ -1.66
CPSF7-219ENST00000539952 KCNIP1Q9NZI2 227 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 OR6C3Q9NZP0 311 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 OR14J1Q9UGF5 321 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 POLDIP2Q9Y2S7 368 aa4.68□□□□□ -1.66
CPSF7-219ENST00000539952 DNAH3Q8TD57 4116 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 FAM90A9PA6NNJ1 464 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 OOSP1A8MZH6 123 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 SH2D1BO14796 132 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 RAB29O14966 203 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 TCAPO15273 167 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 NXPH2O95156 264 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 TMEM50AO95807 157 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 MT-CO2P00403 227 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 AMBPP02760 352 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 BCL3P20749 454 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 CD24P25063 80 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 CNN1P51911 297 aaKnown RBP4.67□□□□□ -1.66
CPSF7-219ENST00000539952 PRRX1P54821 245 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 EDDM3BP56851 147 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 NUTF2P61970 127 aaKnown RBP4.67□□□□□ -1.66
CPSF7-219ENST00000539952 RPL23P62829 140 aaKnown RBP4.67□□□□□ -1.66
CPSF7-219ENST00000539952 RUNX1Q01196 453 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 SLC38A11Q08AI6 406 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 ADIRFQ15847 76 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 ACTL10Q5JWF8 245 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 C1orf194Q5T5A4 169 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 ZFAND6Q6FIF0 208 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 CCDC144NLQ6NUI1 221 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 LCN15Q6UWW0 184 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 LCNL1Q6ZST4 164 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 OR4P4Q8NGL7 312 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 OR10G9Q8NGN4 311 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 OR10G7Q8NGN6 311 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 MRPL30Q8TCC3 161 aaKnown RBP4.67□□□□□ -1.66
CPSF7-219ENST00000539952 RAX2Q96IS3 184 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 OR4C12Q96R67 309 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 NEU1Q99519 415 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 FGF23Q9GZV9 251 aaPredicted RBP4.67□□□□□ -1.66
CPSF7-219ENST00000539952 KCNIP2Q9NS61 270 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 RBM7Q9Y580 266 aaKnown RBP4.67□□□□□ -1.66
CPSF7-219ENST00000539952 LINC00312Q9Y6C7 94 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 LY96Q9Y6Y9 160 aa4.67□□□□□ -1.66
CPSF7-219ENST00000539952 TRBV9A0A0B4J1U6 114 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 IGKV1D-13A0A0B4J2D9 117 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 A0A1B0GV90 55 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 ZNF705GA8MUZ8 300 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms