RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 SPP1P10451 314 aa6.55□□□□□ -1.36
USP28-205ENST00000537706 TFPI2P48307 235 aa6.55□□□□□ -1.36
USP28-205ENST00000537706 PRSS8Q16651 343 aa6.55□□□□□ -1.36
USP28-205ENST00000537706 RTL8BQ17RB0 113 aa6.55□□□□□ -1.36
USP28-205ENST00000537706 TTC32Q5I0X7 151 aa6.55□□□□□ -1.36
USP28-205ENST00000537706 CLLU1Q5K131 121 aa6.55□□□□□ -1.36
USP28-205ENST00000537706 CDPF1Q6NVV7 123 aa6.55□□□□□ -1.36
USP28-205ENST00000537706 GSG1LQ6UXU4 331 aa6.55□□□□□ -1.36
USP28-205ENST00000537706 PPP1R1CQ8WVI7 109 aa6.55□□□□□ -1.36
USP28-205ENST00000537706 ARL6Q9H0F7 186 aa6.55□□□□□ -1.36
USP28-205ENST00000537706 MYCBP2O75592 4640 aa6.55□□□□□ -1.36
USP28-205ENST00000537706 A0A0D9SG52 128 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 RPS10-NUDT3A0A1W2PQS6 291 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 LINC00862A6NCI5 91 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 B3GALNT1O75752 331 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 DFFBO76075 338 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 SMR3BP02814 79 aaPredicted RBP6.54□□□□□ -1.36
USP28-205ENST00000537706 PI3P19957 117 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 CYCSP99999 105 aaKnown RBP6.54□□□□□ -1.36
USP28-205ENST00000537706 OR2F1Q13607 317 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 DHRS11Q6UWP2 260 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 ZNF66Q6ZN08 573 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 KCTD9Q7L273 389 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 TMEM190Q8WZ59 177 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 SCRT1Q9BWW7 348 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 TNFSF18Q9UNG2 199 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 TMEM189A5PLL7 270 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 CRYM-AS1A6NIL9 109 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 FAM25EA8MYX2 175 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 M0R1X1 148 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 NAPSAO96009 420 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 CFDP00746 253 aaPredicted RBP6.54□□□□□ -1.36
USP28-205ENST00000537706 ICAM4Q14773 271 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 HMGN3Q15651 99 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 ZNF546Q86UE3 836 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 KCNRGQ8N5I3 272 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 MRPL30Q8TCC3 161 aaKnown RBP6.54□□□□□ -1.36
USP28-205ENST00000537706 MOB3AQ96BX8 217 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 CHMP1AQ9HD42 196 aaPredicted RBP6.54□□□□□ -1.36
USP28-205ENST00000537706 S4R3C0 116 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 X6R8D5 127 aa6.54□□□□□ -1.36
USP28-205ENST00000537706 TRBV6-7A0A0A0MS04 114 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 RNF222A6NCQ9 220 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 C5orf51A6NDU8 294 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 NPIPB5A8MRT5 1133 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 BCL2L11O43521 198 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 HTN3P15516 51 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 UCP3P55916 312 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 UBE2KP61086 200 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 RAB14P61106 215 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 SLC51BQ86UW2 128 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 MMD2Q8IY49 270 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.53□□□□□ -1.36
USP28-205ENST00000537706 THAP6Q8TBB0 222 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 SCARB1Q8WTV0 552 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 SEC22AQ96IW7 307 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 C20orf24Q9BUV8 137 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 RIMS4Q9H426 269 aaPredicted RBP6.53□□□□□ -1.36
USP28-205ENST00000537706 RDH8Q9NYR8 311 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 MBD2Q9UBB5 411 aa6.53□□□□□ -1.36
USP28-205ENST00000537706 FLG2Q5D862 2391 aaPredicted RBP6.53□□□□□ -1.36
USP28-205ENST00000537706 TRBV6-6A0A0A6YYG2 114 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 CD5P06127 495 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 PET100P0DJ07 73 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 DEFA4P12838 97 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 FCGR2CP31995 323 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 GPR183P32249 361 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 HERV-K104P61576 105 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 LRRC37A5PQ49AS3 106 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 ACOT7LQ6ZUV0 252 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 NAA60Q9H7X0 242 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 Q9N2K0 584 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 AGRNO00468 2067 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 IGHV3-35A0A0C4DH35 117 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 TEX13DA0A0J9YY54 714 aaPredicted RBP6.52□□□□□ -1.37
USP28-205ENST00000537706 KANTRA0A1W2PQU2 76 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 K7EMT4 169 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 DNASE2O00115 360 aaPredicted RBP6.52□□□□□ -1.37
USP28-205ENST00000537706 ADAP1O75689 374 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 PLA2G1BP04054 148 aaKnown RBP6.52□□□□□ -1.37
USP28-205ENST00000537706 REG1AP05451 166 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 CEACAM6P40199 344 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 CCL18P55774 89 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 PIGPP57054 158 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 MOB1BQ7L9L4 216 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 CCDC71LQ8N9Z2 235 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 C2orf50Q96LR7 162 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 SLC2A9Q9NRM0 540 aa6.52□□□□□ -1.37
USP28-205ENST00000537706 CYB5BO43169 146 aa6.51□□□□□ -1.37
USP28-205ENST00000537706 PPYP01298 95 aa6.51□□□□□ -1.37
USP28-205ENST00000537706 CTXN2P0C2S0 81 aa6.51□□□□□ -1.37
USP28-205ENST00000537706 AP2S1P53680 142 aaPredicted RBP6.51□□□□□ -1.37
USP28-205ENST00000537706 DEFB131AP59861 70 aa6.51□□□□□ -1.37
USP28-205ENST00000537706 PRSS54Q6PEW0 395 aa6.51□□□□□ -1.37
USP28-205ENST00000537706 LRTM2Q8N967 370 aa6.51□□□□□ -1.37
USP28-205ENST00000537706 INO80EQ8NBZ0 244 aaPredicted RBP6.51□□□□□ -1.37
USP28-205ENST00000537706 ZNRF2Q8NHG8 242 aa6.51□□□□□ -1.37
USP28-205ENST00000537706 DEFB104AQ8WTQ1 72 aa6.51□□□□□ -1.37
USP28-205ENST00000537706 AGMATQ9BSE5 352 aa6.51□□□□□ -1.37
USP28-205ENST00000537706 PRR13Q9NZ81 148 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms