RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 Q6ZRM9 215 aa14.33□□□□□ -0.12
TNFRSF1B-204ENST00000536782 TRPT1Q86TN4 253 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1B-204ENST00000536782 FAM219AQ8IW50 185 aa14.33□□□□□ -0.12
TNFRSF1B-204ENST00000536782 MARCH1Q8TCQ1 289 aa14.33□□□□□ -0.12
TNFRSF1B-204ENST00000536782 AGRNO00468 2067 aa14.33□□□□□ -0.12
TNFRSF1B-204ENST00000536782 RPS10-NUDT3A0A1W2PQS6 291 aa14.32□□□□□ -0.12
TNFRSF1B-204ENST00000536782 DISC1C4P0D8 188 aa14.32□□□□□ -0.12
TNFRSF1B-204ENST00000536782 IGKV1-17P01599 117 aa14.32□□□□□ -0.12
TNFRSF1B-204ENST00000536782 SPP1P10451 314 aa14.32□□□□□ -0.12
TNFRSF1B-204ENST00000536782 HTR2BP41595 481 aa14.32□□□□□ -0.12
TNFRSF1B-204ENST00000536782 TIGITQ495A1 244 aa14.32□□□□□ -0.12
TNFRSF1B-204ENST00000536782 Q8NAQ8 132 aa14.32□□□□□ -0.12
TNFRSF1B-204ENST00000536782 OR52E5Q8NH55 327 aa14.32□□□□□ -0.12
TNFRSF1B-204ENST00000536782 TMEM222Q9H0R3 208 aa14.32□□□□□ -0.12
TNFRSF1B-204ENST00000536782 HRH4Q9H3N8 390 aa14.32□□□□□ -0.12
TNFRSF1B-204ENST00000536782 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF1B-204ENST00000536782 ANKRD20A5PA0PJZ0 165 aa14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 C11orf94C9JXX5 98 aa14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 CDS2O95674 445 aa14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 GIG44P09565 113 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 OR5AC1P0C628 307 aa14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 ZNF688P0C7X2 276 aa14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 S100A5P33763 92 aa14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 EIF2B2P49770 351 aaKnown RBP14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 SURF2Q15527 256 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 AARDQ4LEZ3 155 aa14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 OR4C16Q8NGL9 310 aa14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 DCANP1Q8TF63 244 aa14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 PRRT1Q99946 306 aa14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 HEYLQ9NQ87 328 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 C14orf166Q9Y224 244 aaKnown RBP14.31□□□□□ -0.12
TNFRSF1B-204ENST00000536782 KIAA1109Q2LD37 5005 aa14.3□□□□□ -0.12
TNFRSF1B-204ENST00000536782 KNCNA6PVL3 124 aa14.3□□□□□ -0.12
TNFRSF1B-204ENST00000536782 MIFP14174 115 aa14.3□□□□□ -0.12
TNFRSF1B-204ENST00000536782 OR1S2Q8NGQ3 325 aa14.3□□□□□ -0.12
TNFRSF1B-204ENST00000536782 IGHV4-28A0A0C4DH34 117 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 TEX13DA0A0J9YY54 714 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 HELTA6NFD8 242 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 IGLL5B9A064 214 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 RBMY1A1P0DJD3 496 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 RBMY1CP0DJD4 496 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 SLC25A4P12235 298 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 PRR20EP86478 221 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 PRR20CP86479 221 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 PRR20DP86480 221 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 PRR20BP86481 221 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 PRR20AP86496 221 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 DHRS2Q13268 280 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 RBMY1FQ15415 496 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 C2orf83Q53S99 150 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 ACTL10Q5JWF8 245 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 FAAP20Q6NZ36 180 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 Q8WTZ3 238 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 GLYATL2Q8WU03 294 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 RBPMSQ93062 196 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 RTBDNQ9BSG5 229 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 U3KQE9 123 aa14.29□□□□□ -0.12
TNFRSF1B-204ENST00000536782 HNRNPCP07910 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 IGLC1P0CG04 106 aa14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 C4BPBP20851 252 aa14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 RND2P52198 227 aa14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 AP2S1P53680 142 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 YPEL3P61236 119 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 DHODHQ02127 395 aa14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 PRSS54Q6PEW0 395 aa14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 SELENOHQ8IZQ5 122 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 LHFPL5Q8TAF8 219 aa14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 RNASEH2CQ8TDP1 164 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 NAA60Q9H7X0 242 aa14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 CACNG5Q9UF02 275 aa14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 SCP2D1Q9UJQ7 156 aa14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 APLNQ9ULZ1 77 aa14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 PCLOQ9Y6V0 5065 aa14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 V9GYH0 126 aa14.28□□□□□ -0.12
TNFRSF1B-204ENST00000536782 CEBPZOSA8MTT3 80 aa14.27□□□□□ -0.13
TNFRSF1B-204ENST00000536782 ZNF705EA8MWA4 302 aaPredicted RBP14.27□□□□□ -0.13
TNFRSF1B-204ENST00000536782 OR10J1P30954 320 aa14.27□□□□□ -0.13
TNFRSF1B-204ENST00000536782 C16orf54Q6UWD8 224 aa14.27□□□□□ -0.13
TNFRSF1B-204ENST00000536782 CCDC190Q86UF4 302 aa14.27□□□□□ -0.13
TNFRSF1B-204ENST00000536782 CENPSQ8N2Z9 138 aa14.27□□□□□ -0.13
TNFRSF1B-204ENST00000536782 SLC24A4Q8NFF2 622 aa14.27□□□□□ -0.13
TNFRSF1B-204ENST00000536782 GPR146Q96CH1 333 aa14.27□□□□□ -0.13
TNFRSF1B-204ENST00000536782 NDUFA13Q9P0J0 144 aa14.27□□□□□ -0.13
TNFRSF1B-204ENST00000536782 X6R8D5 127 aa14.27□□□□□ -0.13
TNFRSF1B-204ENST00000536782 HLA-DMBP28068 263 aa14.26□□□□□ -0.13
TNFRSF1B-204ENST00000536782 AP3S2P59780 193 aa14.26□□□□□ -0.13
TNFRSF1B-204ENST00000536782 PSMG4Q5JS54 123 aa14.26□□□□□ -0.13
TNFRSF1B-204ENST00000536782 TMEM268Q5VZI3 342 aa14.26□□□□□ -0.13
TNFRSF1B-204ENST00000536782 ETFRF1Q6IPR1 90 aa14.26□□□□□ -0.13
TNFRSF1B-204ENST00000536782 OR51S1Q8NGJ8 323 aa14.26□□□□□ -0.13
TNFRSF1B-204ENST00000536782 GLMPQ8WWB7 406 aa14.26□□□□□ -0.13
TNFRSF1B-204ENST00000536782 SCGB3A2Q96PL1 93 aa14.26□□□□□ -0.13
TNFRSF1B-204ENST00000536782 CLEC5AQ9NY25 188 aa14.26□□□□□ -0.13
TNFRSF1B-204ENST00000536782 GPR132Q9UNW8 380 aa14.26□□□□□ -0.13
TNFRSF1B-204ENST00000536782 FAUP35544 74 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1B-204ENST00000536782 PYDC2Q56P42 97 aa14.25□□□□□ -0.13
TNFRSF1B-204ENST00000536782 DEDD2Q8WXF8 326 aa14.25□□□□□ -0.13
TNFRSF1B-204ENST00000536782 TRIM63Q969Q1 353 aa14.25□□□□□ -0.13
TNFRSF1B-204ENST00000536782 RAB40CQ96S21 281 aa14.25□□□□□ -0.13
TNFRSF1B-204ENST00000536782 CACFD1Q9UGQ2 172 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms