RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 TMEM178BH3BS89 294 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 CCDC179H3BU77 68 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 K7ERJ3 54 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 M0QXV9 152 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 BUB3O43684 328 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 EFNA2O43921 213 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 HSBP1O75506 76 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 FOXH1O75593 365 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 MT-ATP6P00846 226 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 CA1P00915 261 aaPredicted RBP2.55□□□□□ -2
CSDE1-216ENST00000534389 HLA-DQA1P01909 254 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 P04436 131 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 SPINK8P0C7L1 97 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 STAG3L2P0CL84 134 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 ARL14EPLP0DKL9 152 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 MYOD1P15172 320 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 COX5AP20674 150 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 F2RP25116 425 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 KRTAP5-9P26371 169 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 GCHFRP30047 84 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 OR1D4P47884 311 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 XGP55808 180 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 NANOS2P60321 138 aaKnown RBP2.55□□□□□ -2
CSDE1-216ENST00000534389 RPS15AP62244 130 aaKnown RBP2.55□□□□□ -2
CSDE1-216ENST00000534389 FKBP1BP68106 108 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 IGLV3-21P80748 117 aaPredicted RBP2.55□□□□□ -2
CSDE1-216ENST00000534389 AESQ08117 197 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 GAGE5Q13069 117 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 GAGE6Q13070 117 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 SRSF6Q13247 344 aaKnown RBP2.55□□□□□ -2
CSDE1-216ENST00000534389 CENPWQ5EE01 88 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 SPATA46Q5T0L3 261 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 TMEM211Q6ICI0 200 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 LINC00696Q6ZRV3 163 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 BPIFA4PQ86YQ2 179 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 OSR2Q8N2R0 312 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 TTC9CQ8N5M4 171 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 GTSF1Q8WW33 167 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 IL1F10Q8WWZ1 152 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 ARPC1AQ92747 370 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 TMEM54Q969K7 222 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 CARD19Q96LW7 228 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 CITED1Q99966 193 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 VGLL1Q99990 258 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 EMC6Q9BV81 110 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 NPCDR1Q9BY65 106 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 FGF23Q9GZV9 251 aaPredicted RBP2.55□□□□□ -2
CSDE1-216ENST00000534389 NXF5Q9H1B4 397 aaKnown RBP2.55□□□□□ -2
CSDE1-216ENST00000534389 TMEM133Q9H2Q1 129 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 PPDPFQ9H3Y8 114 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 OSTCQ9NRP0 149 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 STARD5Q9NSY2 213 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 KCNIP1Q9NZI2 227 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 C19orf25Q9UFG5 118 aaPredicted RBP2.55□□□□□ -2
CSDE1-216ENST00000534389 HSPB8Q9UJY1 196 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 RALYQ9UKM9 306 aaKnown RBP2.55□□□□□ -2
CSDE1-216ENST00000534389 PROCRQ9UNN8 238 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 CCL26Q9Y258 94 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 WDR83OSQ9Y284 106 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 UFC1Q9Y3C8 167 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 TNRC6AQ8NDV7 1962 aaKnown RBP2.54□□□□□ -2
CSDE1-216ENST00000534389 COL4A6Q14031 1691 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 KBTBD11-OT1A0A1B0GTJ5 212 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 A0A1W2PRE2 83 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 FBLL1A6NHQ2 334 aaKnown RBP2.54□□□□□ -2
CSDE1-216ENST00000534389 FAM90A26D6RGX4 464 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 NPIPA5E9PKD4 350 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 FNDC10F2Z333 226 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 NPIPA3F8WFD2 350 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 K7EMI3 77 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 ISLRO14498 428 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 SYNGR1O43759 233 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 KLF7O75840 302 aaPredicted RBP2.54□□□□□ -2
CSDE1-216ENST00000534389 CNIH1O95406 144 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 FAM106CPP0CH98 169 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 FABP2P12104 132 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 GP1BBP13224 206 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 B4GALT1P15291 398 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 AREGP15514 252 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 BCL3P20749 454 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 VDAC2P45880 294 aaPredicted RBP2.54□□□□□ -2
CSDE1-216ENST00000534389 GNG4P50150 75 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 FABP6P51161 128 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 ZNF138P52744 262 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 FXYD2P54710 66 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 EDDM3BP56851 147 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 RPL31P62899 125 aaKnown RBP2.54□□□□□ -2
CSDE1-216ENST00000534389 HBG1P69891 147 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 HBG2P69892 147 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 RPL36AP83881 106 aaKnown RBP2.54□□□□□ -2
CSDE1-216ENST00000534389 DIAPH2-AS1Q14236 149 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 CEACAM16Q2WEN9 425 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 ETDBQ3ZM63 59 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 COX19Q49B96 90 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 PMS2CLQ68D20 193 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 Q6ZUT4 128 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 FOXL2NBQ6ZUU3 175 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 SSX8Q7RTT4 187 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 PCP2Q8IVA1 136 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 ABHD12Q8N2K0 398 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms