RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 HLA-DRB1P01911 266 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 COX5BP10606 129 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 TCL1AP56279 114 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 MED21Q13503 144 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 ESRGQ1W209 222 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 ANKRD29Q8N6D5 301 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 TMEM254Q8TBM7 123 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 NIPSNAP1Q9BPW8 284 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 DRC3Q9H069 523 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 HEATR1Q9H583 2144 aaKnown RBP-0.18□□□□□ -2.44
ATM-217ENST00000531957 IMP3Q9NV31 184 aaKnown RBP-0.18□□□□□ -2.44
ATM-217ENST00000531957 ORMDL1Q9P0S3 153 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 JPT1Q9UK76 154 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 SCN10AQ9Y5Y9 1956 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 MUC4Q99102 2169 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 BDP1A6H8Y1 2624 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 PTPRZ1P23471 2315 aaPredicted RBP-0.19□□□□□ -2.44
ATM-217ENST00000531957 SMIM9A6NGZ8 99 aa-0.19□□□□□ -2.44
ATM-217ENST00000531957 EEF1E1-BLOC1S5C9J1V9 151 aa-0.19□□□□□ -2.44
ATM-217ENST00000531957 H0Y980 276 aa-0.19□□□□□ -2.44
ATM-217ENST00000531957 BUB1B-PAK6H3BSN5 160 aa-0.19□□□□□ -2.44
ATM-217ENST00000531957 NUPR1O60356 82 aa-0.19□□□□□ -2.44
ATM-217ENST00000531957 OCM2P0CE71 109 aa-0.19□□□□□ -2.44
ATM-217ENST00000531957 SPINT3P49223 89 aa-0.19□□□□□ -2.44
ATM-217ENST00000531957 LINC01554Q52M75 96 aa-0.19□□□□□ -2.44
ATM-217ENST00000531957 SFXN4Q6P4A7 337 aa-0.19□□□□□ -2.44
ATM-217ENST00000531957 FAM9CQ8IZT9 166 aa-0.19□□□□□ -2.44
ATM-217ENST00000531957 FAM103A1Q9BTL3 118 aaKnown RBP-0.19□□□□□ -2.44
ATM-217ENST00000531957 C14orf132Q9NPU4 83 aa-0.19□□□□□ -2.44
ATM-217ENST00000531957 EXOC1LA0A1B0GW35 172 aa-0.2□□□□□ -2.44
ATM-217ENST00000531957 AHSA1O95433 338 aa-0.2□□□□□ -2.44
ATM-217ENST00000531957 CDC42P60953 191 aa-0.2□□□□□ -2.44
ATM-217ENST00000531957 HAGHLQ6PII5 290 aaPredicted RBP-0.2□□□□□ -2.44
ATM-217ENST00000531957 OR2T35Q8NGX2 323 aa-0.2□□□□□ -2.44
ATM-217ENST00000531957 OR10AC1Q8NH08 325 aa-0.2□□□□□ -2.44
ATM-217ENST00000531957 PSMF1Q92530 271 aa-0.2□□□□□ -2.44
ATM-217ENST00000531957 UTP11Q9Y3A2 253 aaKnown RBP-0.2□□□□□ -2.44
ATM-217ENST00000531957 KIAA1549Q9HCM3 1950 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 CHD3Q12873 2000 aaKnown RBP-0.21□□□□□ -2.44
ATM-217ENST00000531957 TCRBV4S1A1TA0A5B7 111 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 C7orf71A4D174 169 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 LRRN3E7EW58 273 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 K7EIL1 84 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 PSMD12O00232 456 aaPredicted RBP-0.21□□□□□ -2.44
ATM-217ENST00000531957 SLC16A4O15374 487 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 CRYZL1O95825 349 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 TNNC2P02585 160 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 OR4E1P0C645 316 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 ANP32AP39687 249 aaKnown RBP-0.21□□□□□ -2.44
ATM-217ENST00000531957 FXYD6P3P58550 94 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 RAB5BP61020 215 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 YPEL3P61236 119 aaPredicted RBP-0.21□□□□□ -2.44
ATM-217ENST00000531957 CDKL4Q5MAI5 379 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 CLEC6AQ6EIG7 209 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 C20orf196Q8IYI0 205 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 OR52R1Q8NGF1 315 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 PSTPIP2Q9H939 334 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 DSTQ03001 7570 aaKnown RBP-0.21□□□□□ -2.44
ATM-217ENST00000531957 NCOR2Q9Y618 2525 aa-0.21□□□□□ -2.44
ATM-217ENST00000531957 TAF1LQ8IZX4 1826 aa-0.22□□□□□ -2.44
ATM-217ENST00000531957 A0A0A6YYH2 397 aa-0.22□□□□□ -2.44
ATM-217ENST00000531957 NUPR2A6NF83 97 aa-0.22□□□□□ -2.44
ATM-217ENST00000531957 A6NJ64 397 aa-0.22□□□□□ -2.44
ATM-217ENST00000531957 OR5G3P0C626 314 aa-0.22□□□□□ -2.44
ATM-217ENST00000531957 DEFA1P59665 94 aa-0.22□□□□□ -2.44
ATM-217ENST00000531957 RHOBP62745 196 aa-0.22□□□□□ -2.44
ATM-217ENST00000531957 SPOPLQ6IQ16 392 aa-0.22□□□□□ -2.44
ATM-217ENST00000531957 C2orf82Q6UX34 121 aa-0.22□□□□□ -2.44
ATM-217ENST00000531957 TMEM56-RWDD3S4R434 201 aa-0.22□□□□□ -2.44
ATM-217ENST00000531957 MYO18AQ92614 2054 aaKnown RBP-0.22□□□□□ -2.44
ATM-217ENST00000531957 TET1Q8NFU7 2136 aa-0.22□□□□□ -2.44
ATM-217ENST00000531957 DEXIO95424 95 aa-0.23□□□□□ -2.45
ATM-217ENST00000531957 DHFRP00374 187 aa-0.23□□□□□ -2.45
ATM-217ENST00000531957 AP2S1P53680 142 aaPredicted RBP-0.23□□□□□ -2.45
ATM-217ENST00000531957 PSME3P61289 254 aa-0.23□□□□□ -2.45
ATM-217ENST00000531957 SNRPD2P62316 118 aaKnown RBP-0.23□□□□□ -2.45
ATM-217ENST00000531957 OR2T10Q8NGZ9 312 aa-0.23□□□□□ -2.45
ATM-217ENST00000531957 ATP6V1G3Q96LB4 118 aa-0.23□□□□□ -2.45
ATM-217ENST00000531957 TP53RKQ96S44 253 aa-0.23□□□□□ -2.45
ATM-217ENST00000531957 GPER1Q99527 375 aa-0.23□□□□□ -2.45
ATM-217ENST00000531957 BCL2L10Q9HD36 194 aa-0.23□□□□□ -2.45
ATM-217ENST00000531957 TMEM138Q9NPI0 162 aa-0.23□□□□□ -2.45
ATM-217ENST00000531957 LRP1Q07954 4544 aaKnown RBP-0.23□□□□□ -2.45
ATM-217ENST00000531957 UNC13CQ8NB66 2214 aa-0.23□□□□□ -2.45
ATM-217ENST00000531957 A0A087X0T9 212 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 C5orf67F2Z3F1 127 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 H3BRM9 83 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 GADD45GO95257 159 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 ZNF682O95780 498 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 CD2P06729 351 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 CD79AP11912 226 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 CASP1P29466 404 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 TSNQ15631 228 aaKnown RBP-0.24□□□□□ -2.45
ATM-217ENST00000531957 C12orf74Q32Q52 190 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 FAM151BQ6UXP7 276 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 ALKAL1Q6UXT8 129 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 TEN1Q86WV5 123 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 ATOH7Q8N100 152 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 KRT222Q8N1A0 295 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 OR8D4Q8NGM9 314 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms