RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 RFNGQ9Y644 331 aa10.46□□□□□ -0.73
CSTF3-204ENST00000524556 HLA-DRB4P13762 266 aa10.45□□□□□ -0.74
CSTF3-204ENST00000524556 HOXA1P49639 335 aaPredicted RBP10.45□□□□□ -0.74
CSTF3-204ENST00000524556 BSXQ3C1V8 233 aa10.45□□□□□ -0.74
CSTF3-204ENST00000524556 CROCCP3Q8IVE0 287 aa10.45□□□□□ -0.74
CSTF3-204ENST00000524556 MAPKAPK5-AS1Q8N8E1 139 aa10.45□□□□□ -0.74
CSTF3-204ENST00000524556 OR1S2Q8NGQ3 325 aa10.45□□□□□ -0.74
CSTF3-204ENST00000524556 GPX8Q8TED1 209 aa10.45□□□□□ -0.74
CSTF3-204ENST00000524556 Q8WTZ3 238 aa10.45□□□□□ -0.74
CSTF3-204ENST00000524556 NIPSNAP3BQ9BS92 247 aa10.45□□□□□ -0.74
CSTF3-204ENST00000524556 PDCD10Q9BUL8 212 aa10.45□□□□□ -0.74
CSTF3-204ENST00000524556 ENY2Q9NPA8 101 aa10.45□□□□□ -0.74
CSTF3-204ENST00000524556 NRN1Q9NPD7 142 aa10.45□□□□□ -0.74
CSTF3-204ENST00000524556 HLA-DRB4X5D2U9 266 aa10.45□□□□□ -0.74
CSTF3-204ENST00000524556 TEX48A0A1B0GUV7 120 aa10.44□□□□□ -0.74
CSTF3-204ENST00000524556 RND3P61587 244 aa10.44□□□□□ -0.74
CSTF3-204ENST00000524556 OXA1LQ15070 435 aa10.44□□□□□ -0.74
CSTF3-204ENST00000524556 FAM222AQ5U5X8 452 aa10.44□□□□□ -0.74
CSTF3-204ENST00000524556 SAMD12Q8N8I0 201 aa10.44□□□□□ -0.74
CSTF3-204ENST00000524556 IGHV3OR16-12A0A075B7B8 117 aa10.43□□□□□ -0.74
CSTF3-204ENST00000524556 RPS10-NUDT3A0A1W2PQS6 291 aa10.43□□□□□ -0.74
CSTF3-204ENST00000524556 IGLC1P0CG04 106 aa10.43□□□□□ -0.74
CSTF3-204ENST00000524556 HTN3P15516 51 aa10.43□□□□□ -0.74
CSTF3-204ENST00000524556 NKX2-1P43699 371 aaPredicted RBP10.43□□□□□ -0.74
CSTF3-204ENST00000524556 AKR1C2P52895 323 aa10.43□□□□□ -0.74
CSTF3-204ENST00000524556 FXYD7P58549 80 aa10.43□□□□□ -0.74
CSTF3-204ENST00000524556 YPEL3P61236 119 aaPredicted RBP10.43□□□□□ -0.74
CSTF3-204ENST00000524556 DHODHQ02127 395 aa10.43□□□□□ -0.74
CSTF3-204ENST00000524556 TNP2Q05952 138 aa10.43□□□□□ -0.74
CSTF3-204ENST00000524556 TP53RKQ96S44 253 aa10.43□□□□□ -0.74
CSTF3-204ENST00000524556 BUB3O43684 328 aa10.42□□□□□ -0.74
CSTF3-204ENST00000524556 ATG12O94817 140 aa10.42□□□□□ -0.74
CSTF3-204ENST00000524556 OR10J1P30954 320 aa10.42□□□□□ -0.74
CSTF3-204ENST00000524556 RND2P52198 227 aa10.42□□□□□ -0.74
CSTF3-204ENST00000524556 FAM3BP58499 235 aaPredicted RBP10.42□□□□□ -0.74
CSTF3-204ENST00000524556 USF2Q15853 346 aaPredicted RBP10.42□□□□□ -0.74
CSTF3-204ENST00000524556 GDF5OSQ5U4N7 250 aa10.42□□□□□ -0.74
CSTF3-204ENST00000524556 PRSS54Q6PEW0 395 aa10.42□□□□□ -0.74
CSTF3-204ENST00000524556 TMEM88Q6PEY1 159 aa10.42□□□□□ -0.74
CSTF3-204ENST00000524556 SIGLEC15Q6ZMC9 328 aa10.42□□□□□ -0.74
CSTF3-204ENST00000524556 ZNF486Q96H40 463 aaPredicted RBP10.42□□□□□ -0.74
CSTF3-204ENST00000524556 YTHDF1Q9BYJ9 559 aaKnown RBP10.42□□□□□ -0.74
CSTF3-204ENST00000524556 IGKV3-20P01619 116 aa10.41□□□□□ -0.74
CSTF3-204ENST00000524556 IL4P05112 153 aa10.41□□□□□ -0.74
CSTF3-204ENST00000524556 PGAM2P15259 253 aa10.41□□□□□ -0.74
CSTF3-204ENST00000524556 PI3P19957 117 aa10.41□□□□□ -0.74
CSTF3-204ENST00000524556 TGFBR1P36897 503 aa10.41□□□□□ -0.74
CSTF3-204ENST00000524556 RPS19P39019 145 aaKnown RBP10.41□□□□□ -0.74
CSTF3-204ENST00000524556 HTR2BP41595 481 aa10.41□□□□□ -0.74
CSTF3-204ENST00000524556 PIGPP57054 158 aa10.41□□□□□ -0.74
CSTF3-204ENST00000524556 DEFB1P60022 68 aa10.41□□□□□ -0.74
CSTF3-204ENST00000524556 SCPEP1Q9HB40 452 aa10.41□□□□□ -0.74
CSTF3-204ENST00000524556 TMED3Q9Y3Q3 217 aa10.41□□□□□ -0.74
CSTF3-204ENST00000524556 A0A0G2JRQ6 117 aa10.4□□□□□ -0.74
CSTF3-204ENST00000524556 C3orf85A0A1B0GTC6 90 aa10.4□□□□□ -0.74
CSTF3-204ENST00000524556 GSTZ1O43708 216 aaPredicted RBP10.4□□□□□ -0.74
CSTF3-204ENST00000524556 SLC25A4P12235 298 aa10.4□□□□□ -0.74
CSTF3-204ENST00000524556 RCVRNP35243 200 aa10.4□□□□□ -0.74
CSTF3-204ENST00000524556 SPCS3P61009 180 aa10.4□□□□□ -0.74
CSTF3-204ENST00000524556 ZNF709Q8N972 641 aa10.4□□□□□ -0.74
CSTF3-204ENST00000524556 CLUHP3Q96NS8 147 aa10.4□□□□□ -0.74
CSTF3-204ENST00000524556 SAV1Q9H4B6 383 aaPredicted RBP10.4□□□□□ -0.74
CSTF3-204ENST00000524556 M0QYG6 137 aa10.39□□□□□ -0.75
CSTF3-204ENST00000524556 TRIM16LQ309B1 348 aa10.39□□□□□ -0.75
CSTF3-204ENST00000524556 SP6Q3SY56 376 aa10.39□□□□□ -0.75
CSTF3-204ENST00000524556 AARDQ4LEZ3 155 aa10.39□□□□□ -0.75
CSTF3-204ENST00000524556 C2orf83Q53S99 150 aa10.39□□□□□ -0.75
CSTF3-204ENST00000524556 FOXI2Q6ZQN5 318 aa10.39□□□□□ -0.75
CSTF3-204ENST00000524556 Q8N1X5 172 aa10.39□□□□□ -0.75
CSTF3-204ENST00000524556 C15orf53Q8NAA6 179 aa10.39□□□□□ -0.75
CSTF3-204ENST00000524556 OR52E5Q8NH55 327 aa10.39□□□□□ -0.75
CSTF3-204ENST00000524556 RNASEH2CQ8TDP1 164 aaKnown RBP10.39□□□□□ -0.75
CSTF3-204ENST00000524556 RRNAD1Q96FB5 475 aaKnown RBP10.39□□□□□ -0.75
CSTF3-204ENST00000524556 LINC00052Q96N35 136 aa10.39□□□□□ -0.75
CSTF3-204ENST00000524556 GOLT1BQ9Y3E0 138 aa10.39□□□□□ -0.75
CSTF3-204ENST00000524556 YTHDF2Q9Y5A9 579 aaKnown RBP10.39□□□□□ -0.75
CSTF3-204ENST00000524556 LOC102723971A0A1B0GUV8 181 aa10.38□□□□□ -0.75
CSTF3-204ENST00000524556 TOMM40O96008 361 aa10.38□□□□□ -0.75
CSTF3-204ENST00000524556 HBE1P02100 147 aa10.38□□□□□ -0.75
CSTF3-204ENST00000524556 RD3LP0DJH9 198 aa10.38□□□□□ -0.75
CSTF3-204ENST00000524556 DAD1P61803 113 aa10.38□□□□□ -0.75
CSTF3-204ENST00000524556 NEDD8Q15843 81 aa10.38□□□□□ -0.75
CSTF3-204ENST00000524556 LHFPL1Q86WI0 220 aa10.38□□□□□ -0.75
CSTF3-204ENST00000524556 SNX29P2Q8IUI4 249 aa10.38□□□□□ -0.75
CSTF3-204ENST00000524556 C1orf158Q8N1D5 194 aa10.38□□□□□ -0.75
CSTF3-204ENST00000524556 OR4B1Q8NGF8 309 aa10.38□□□□□ -0.75
CSTF3-204ENST00000524556 NPIPB3Q92617 1050 aa10.38□□□□□ -0.75
CSTF3-204ENST00000524556 WDR12Q9GZL7 423 aaKnown RBP10.38□□□□□ -0.75
CSTF3-204ENST00000524556 SLC35B3Q9H1N7 401 aa10.38□□□□□ -0.75
CSTF3-204ENST00000524556 HEYLQ9NQ87 328 aaPredicted RBP10.38□□□□□ -0.75
CSTF3-204ENST00000524556 NBDYA0A0U1RRE5 68 aa10.37□□□□□ -0.75
CSTF3-204ENST00000524556 SMIM31A0A1B0GVY4 71 aa10.37□□□□□ -0.75
CSTF3-204ENST00000524556 NXPH3O95157 252 aa10.37□□□□□ -0.75
CSTF3-204ENST00000524556 UCP1P25874 307 aa10.37□□□□□ -0.75
CSTF3-204ENST00000524556 ID1P41134 155 aa10.37□□□□□ -0.75
CSTF3-204ENST00000524556 PSG9Q00887 426 aa10.37□□□□□ -0.75
CSTF3-204ENST00000524556 ZNF79Q15937 498 aa10.37□□□□□ -0.75
CSTF3-204ENST00000524556 ETFRF1Q6IPR1 90 aa10.37□□□□□ -0.75
CSTF3-204ENST00000524556 C6orf223Q8N319 242 aa10.37□□□□□ -0.75
CSTF3-204ENST00000524556 OR51G1Q8NGK1 321 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms