RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 RXFP4Q8TDU9 374 aa11.79□□□□□ -0.52
SREK1-209ENST00000520953 C20orf24Q9BUV8 137 aa11.79□□□□□ -0.52
SREK1-209ENST00000520953 NPIPB5A8MRT5 1133 aa11.78□□□□□ -0.52
SREK1-209ENST00000520953 DEFA4P12838 97 aa11.78□□□□□ -0.52
SREK1-209ENST00000520953 MDKP21741 143 aaPredicted RBP11.78□□□□□ -0.52
SREK1-209ENST00000520953 FGF8P55075 233 aaPredicted RBP11.78□□□□□ -0.52
SREK1-209ENST00000520953 RPP30P78346 268 aaKnown RBP11.78□□□□□ -0.52
SREK1-209ENST00000520953 PVRIGQ6DKI7 326 aa11.78□□□□□ -0.52
SREK1-209ENST00000520953 LCNL1Q6ZST4 164 aa11.78□□□□□ -0.52
SREK1-209ENST00000520953 OR1P1Q8NH06 330 aa11.78□□□□□ -0.52
SREK1-209ENST00000520953 RPS10P5Q9NQ39 176 aa11.78□□□□□ -0.52
SREK1-209ENST00000520953 TRAV41A0A0B4J266 112 aa11.78□□□□□ -0.52
SREK1-209ENST00000520953 LOC102723971A0A1B0GUV8 181 aa11.78□□□□□ -0.52
SREK1-209ENST00000520953 C7orf77A4D0Y5 90 aa11.78□□□□□ -0.52
SREK1-209ENST00000520953 M0R036 132 aa11.78□□□□□ -0.52
SREK1-209ENST00000520953 EIF3GO75821 320 aaKnown RBP eCLIP11.78□□□□□ -0.52
SREK1-209ENST00000520953 HSPB1P04792 205 aaKnown RBP11.78□□□□□ -0.52
SREK1-209ENST00000520953 RPP25LQ8N5L8 163 aaKnown RBP11.78□□□□□ -0.52
SREK1-209ENST00000520953 TMEM86BQ8N661 226 aa11.78□□□□□ -0.52
SREK1-209ENST00000520953 MS4A10Q96PG2 267 aa11.78□□□□□ -0.52
SREK1-209ENST00000520953 SRSF8Q9BRL6 282 aaKnown RBP11.78□□□□□ -0.52
SREK1-209ENST00000520953 GNG13Q9P2W3 67 aa11.78□□□□□ -0.52
SREK1-209ENST00000520953 SMCO3A2RU48 225 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 IGF1P05019 195 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 OPRK1P41145 380 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 ZNF329Q86UD4 541 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 NPCDR1Q9BY65 106 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 SMCO4Q9NRQ5 59 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 IGLV11-55A0A075B6I3 123 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 CRLF1O75462 422 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 OR2J3O76001 311 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 LY86O95711 162 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 HILS1P60008 231 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 CD69Q07108 199 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 KHDC3LQ587J8 217 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 CYB561D1Q8N8Q1 229 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 FAM110DQ8TAY7 271 aaPredicted RBP11.77□□□□□ -0.53
SREK1-209ENST00000520953 NPFFR1Q9GZQ6 430 aa11.77□□□□□ -0.53
SREK1-209ENST00000520953 MAP1LC3B2A6NCE7 125 aa11.76□□□□□ -0.53
SREK1-209ENST00000520953 NDUFB8O95169 186 aa11.76□□□□□ -0.53
SREK1-209ENST00000520953 MT-CO2P00403 227 aa11.76□□□□□ -0.53
SREK1-209ENST00000520953 IGHV3-23P01764 117 aa11.76□□□□□ -0.53
SREK1-209ENST00000520953 CEBPGP53567 150 aa11.76□□□□□ -0.53
SREK1-209ENST00000520953 SUB1P53999 127 aaKnown RBP eCLIP11.76□□□□□ -0.53
SREK1-209ENST00000520953 GAMTQ14353 236 aa11.76□□□□□ -0.53
SREK1-209ENST00000520953 HIST2H2BDQ6DRA6 164 aa11.76□□□□□ -0.53
SREK1-209ENST00000520953 SLC16A13Q7RTY0 426 aa11.76□□□□□ -0.53
SREK1-209ENST00000520953 ZNF418Q8TF45 676 aaPredicted RBP11.76□□□□□ -0.53
SREK1-209ENST00000520953 MAP1LC3BQ9GZQ8 125 aa11.76□□□□□ -0.53
SREK1-209ENST00000520953 ZNF355PQ9NSJ1 428 aa11.76□□□□□ -0.53
SREK1-209ENST00000520953 PUS1Q9Y606 427 aaKnown RBP eCLIP11.76□□□□□ -0.53
SREK1-209ENST00000520953 C2CD3Q4AC94 2353 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 IGKV1OR2-108A0A075B7D4 117 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 ZFP92A6NM28 416 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 COLCA2A8K830 154 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 I3L2K1 104 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 K7EIM0 57 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 BCL2P10415 239 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 PPIFP30405 207 aaKnown RBP11.75□□□□□ -0.53
SREK1-209ENST00000520953 CRIP2P52943 208 aaPredicted RBP11.75□□□□□ -0.53
SREK1-209ENST00000520953 Q6ZSV7 163 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 MRPL41Q8IXM3 137 aaKnown RBP11.75□□□□□ -0.53
SREK1-209ENST00000520953 ACY3Q96HD9 319 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 PRSS22Q9GZN4 317 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 AP4M1O00189 453 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 SMUG1Q53HV7 270 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 FFAR4Q5NUL3 377 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 TREML4Q6UXN2 200 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 RNASEH2CQ8TDP1 164 aaKnown RBP11.75□□□□□ -0.53
SREK1-209ENST00000520953 KLK15Q9H2R5 256 aa11.75□□□□□ -0.53
SREK1-209ENST00000520953 CLDN34H7C241 214 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 CFHR3Q02985 330 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 RHEBQ15382 184 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 WDR83OSQ9Y284 106 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 H3BQ15 152 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 RNASE1P07998 156 aaKnown RBP11.74□□□□□ -0.53
SREK1-209ENST00000520953 DLK1P80370 383 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 SCGB2A2Q13296 93 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 ZNF709Q8N972 641 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 OR10G4Q8NGN3 311 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 OR10G9Q8NGN4 311 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 OR10G7Q8NGN6 311 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 SLC25A22Q9H936 323 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 SERTAD4Q9NUC0 356 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 SLC39A9Q9NUM3 307 aa11.74□□□□□ -0.53
SREK1-209ENST00000520953 HMGB3O15347 200 aaKnown RBP11.73□□□□□ -0.53
SREK1-209ENST00000520953 MBP02144 154 aa11.73□□□□□ -0.53
SREK1-209ENST00000520953 RND2P52198 227 aa11.73□□□□□ -0.53
SREK1-209ENST00000520953 ATP5IP56385 69 aaPredicted RBP11.73□□□□□ -0.53
SREK1-209ENST00000520953 RHOGP84095 191 aa11.73□□□□□ -0.53
SREK1-209ENST00000520953 NPIPB3Q92617 1050 aa11.73□□□□□ -0.53
SREK1-209ENST00000520953 FBXL7Q9UJT9 491 aa11.73□□□□□ -0.53
SREK1-209ENST00000520953 CTXND1A0A1B0GTU2 59 aa11.72□□□□□ -0.53
SREK1-209ENST00000520953 Q8N2B8 174 aa11.72□□□□□ -0.53
SREK1-209ENST00000520953 C15orf54Q8N8G6 183 aa11.72□□□□□ -0.53
SREK1-209ENST00000520953 ISOC2Q96AB3 205 aa11.72□□□□□ -0.53
SREK1-209ENST00000520953 MGST2Q99735 147 aa11.72□□□□□ -0.53
SREK1-209ENST00000520953 C17orf112F2Z3M2 114 aa11.72□□□□□ -0.53
SREK1-209ENST00000520953 CRYBA1P05813 215 aa11.72□□□□□ -0.53
SREK1-209ENST00000520953 GATA2P23769 480 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms