RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 HYLS1Q96M11 299 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 RNF2Q99496 336 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 PHB2Q99623 299 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 SLC25A21Q9BQT8 299 aaPredicted RBP3.62□□□□□ -1.83
SDCBP-207ENST00000520168 FAM103A1Q9BTL3 118 aaKnown RBP3.62□□□□□ -1.83
SDCBP-207ENST00000520168 GSKIPQ9P0R6 139 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 RCC2Q9P258 522 aaKnown RBP3.62□□□□□ -1.83
SDCBP-207ENST00000520168 KLK11Q9UBX7 282 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 APLNQ9ULZ1 77 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 ING4Q9UNL4 249 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 C2orf70A6NJV1 201 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 FAM223BA6NKX1 122 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 TMEM14DPA8MWL7 114 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 IGLL5B9A064 214 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 K7EP13 123 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 CA11O75493 328 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 OR7C1O76099 320 aaPredicted RBP3.61□□□□□ -1.83
SDCBP-207ENST00000520168 NDUFB6O95139 128 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 CA2P00918 260 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 SCTP09683 121 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 METTL15P1P0C7V9 234 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 RD3LP0DJH9 198 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 FOLR2P14207 255 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 TBPP20226 339 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 MALP21145 153 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF93P35789 620 aaPredicted RBP3.61□□□□□ -1.83
SDCBP-207ENST00000520168 CEACAM6P40199 344 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 CCR6P51684 374 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 TAS2R19P59542 299 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 RAP2BP61225 183 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 CDK10Q15131 360 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 RSU1Q15404 277 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 MPV17LQ2QL34 196 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 MORN2Q502X0 79 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 PDZD11Q5EBL8 140 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 STEAP1BQ6NZ63 245 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF497Q6ZNH5 498 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 SSX7Q7RTT5 188 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 ERASQ7Z444 233 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF575Q86XF7 245 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 FAM223AQ8IWN6 122 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 BOD1L2Q8IYS8 172 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 POM121L12Q8N7R1 296 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 OR51A2Q8NGJ7 313 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 ZFAND1Q8TCF1 268 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 CCDC107Q8WV48 283 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 ASB13Q8WXK3 278 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 MRPS24Q96EL2 167 aaKnown RBP3.61□□□□□ -1.83
SDCBP-207ENST00000520168 GALNT14Q96FL9 552 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 RITA1Q96K30 269 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 HARBI1Q96MB7 349 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 RAB40CQ96S21 281 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 TSNAXQ99598 290 aaKnown RBP3.61□□□□□ -1.83
SDCBP-207ENST00000520168 URM1Q9BTM9 101 aaKnown RBP3.61□□□□□ -1.83
SDCBP-207ENST00000520168 RSG1Q9BU20 258 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 MRPL20Q9BYC9 149 aaKnown RBP3.61□□□□□ -1.83
SDCBP-207ENST00000520168 FBXL15Q9H469 300 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 NIT2Q9NQR4 276 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 PLEKHJ1Q9NW61 149 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 PIPOXQ9P0Z9 390 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 METTL1Q9UBP6 276 aaKnown RBP3.61□□□□□ -1.83
SDCBP-207ENST00000520168 SCP2D1Q9UJQ7 156 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 JPT1Q9UK76 154 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 ST3GAL6Q9Y274 331 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 WASHC3Q9Y3C0 194 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 HSPB11Q9Y547 144 aa3.61□□□□□ -1.83
SDCBP-207ENST00000520168 SAA2-SAA4A0A096LPE2 208 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.6□□□□□ -1.83
SDCBP-207ENST00000520168 TRAV39A0A0B4J263 110 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 LOC102723971A0A1B0GUV8 181 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 UBE2QL1A1L167 161 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 C9orf170A2RU37 121 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 A8MWP6 167 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 C16orf90A8MZG2 172 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 DISC1C4P0D8 188 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 TEX46H3BTG2 121 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 FCN1O00602 326 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 RS1O15537 224 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 FABP7O15540 132 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 DLEU1O43261 78 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 SSNA1O43805 119 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 CREBL2O60519 120 aaPredicted RBP3.6□□□□□ -1.83
SDCBP-207ENST00000520168 YPEL1O60688 119 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF780AO75290 641 aaPredicted RBP3.6□□□□□ -1.83
SDCBP-207ENST00000520168 HSBP1O75506 76 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 CD74P04233 296 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 SAA2P0DJI9 122 aaPredicted RBP3.6□□□□□ -1.83
SDCBP-207ENST00000520168 SULT1A3P0DMM9 295 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 SULT1A4P0DMN0 295 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 VPREB1P12018 145 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 FGF8P55075 233 aaPredicted RBP3.6□□□□□ -1.83
SDCBP-207ENST00000520168 RBM11P57052 281 aaKnown RBP3.6□□□□□ -1.83
SDCBP-207ENST00000520168 NANOS2P60321 138 aaKnown RBP3.6□□□□□ -1.83
SDCBP-207ENST00000520168 HERV-K104P63124 156 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 PLA2G7Q13093 441 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 FXYD3Q14802 87 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 FCN2Q15485 313 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 PIGYQ3MUY2 71 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 RNASE12Q5GAN4 147 aaKnown RBP3.6□□□□□ -1.83
SDCBP-207ENST00000520168 C6orf226Q5I0X4 101 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms