RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 RPS10-NUDT3A0A1W2PQS6 291 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 ZNF705FA8MVS1 300 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-204ENST00000517990 H3BMM0 161 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 GPR31O00270 319 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 SSX5O60225 188 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 CLN5O75503 358 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 PGLYRP1O75594 196 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-204ENST00000517990 ATG12O94817 140 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 HNRNPCP07910 306 aaKnown RBP eCLIP4.39□□□□□ -1.715e-7■□□□□ 9.3
PABPC1-204ENST00000517990 ZNF705DP0CH99 300 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-204ENST00000517990 ZNF705BP0CI00 300 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-204ENST00000517990 HLA-DRB4P13762 266 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 NUP62P37198 522 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-204ENST00000517990 ID1P41134 155 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 OPRK1P41145 380 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 NKX2-1P43699 371 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-204ENST00000517990 ALDH3B2P48448 385 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 SCAND1P57086 179 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 HSPE1P61604 102 aaKnown RBP4.39□□□□□ -1.71
PABPC1-204ENST00000517990 CLINT1Q14677 625 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 RRN3P1Q2M238 152 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 ZNF705AQ6ZN79 300 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-204ENST00000517990 PRSS48Q7RTY5 328 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 OR6F1Q8NGZ6 308 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 Q8WTZ3 238 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 ZNF2Q9BSG1 426 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-204ENST00000517990 RHBDL2Q9NX52 303 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 EHFQ9NZC4 300 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 HLA-DRB4X5D2U9 266 aa4.39□□□□□ -1.71
PABPC1-204ENST00000517990 A0A1B0GU03 582 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 LOC102723971A0A1B0GUV8 181 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 FAM90A26D6RGX4 464 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 PTHLHP12272 177 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 BTF3P20290 206 aaKnown RBP4.38□□□□□ -1.71
PABPC1-204ENST00000517990 HSPA13P48723 471 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 TAS2R46P59540 309 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 SPATA31B1PQ5VZV4 182 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 C22orf42Q6IC83 251 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 C16orf54Q6UWD8 224 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 OR1S2Q8NGQ3 325 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 OR5H2Q8NGV7 314 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 OR4X1Q8NH49 305 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 FRZBQ92765 325 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 TMEM208Q9BTX3 173 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 MAGT1Q9H0U3 335 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 DUSP21Q9H596 190 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 NRN1Q9NPD7 142 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 NDUFB11Q9NX14 153 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 BLOC1S6Q9UL45 172 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 RRP15Q9Y3B9 282 aaKnown RBP4.38□□□□□ -1.71
PABPC1-204ENST00000517990 LRP1BQ9NZR2 4599 aa4.38□□□□□ -1.71
PABPC1-204ENST00000517990 LYRM9A8MSI8 78 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 H3BS24 57 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 NUDT3O95989 172 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 IGKV3-20P01619 116 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 RPL5P46777 297 aaKnown RBP4.37□□□□□ -1.71
PABPC1-204ENST00000517990 PPP5CP53041 499 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 B2MP61769 119 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 TSPAN5P62079 268 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 TBCEQ15813 527 aaPredicted RBP4.37□□□□□ -1.71
PABPC1-204ENST00000517990 IDNKQ5T6J7 187 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 SAMD13Q5VXD3 122 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 ETFRF1Q6IPR1 90 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 EBLN2Q6P2I7 272 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 SFXN4Q6P4A7 337 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 DHRS11Q6UWP2 260 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 SIGLEC15Q6ZMC9 328 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 FOXI2Q6ZQN5 318 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 OR4B1Q8NGF8 309 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 ZNRF2Q8NHG8 242 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 COQ8AQ8NI60 647 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 LINC00052Q96N35 136 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 CLUHP3Q96NS8 147 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 SCPEP1Q9HB40 452 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 YTHDF2Q9Y5A9 579 aaKnown RBP4.37□□□□□ -1.71
PABPC1-204ENST00000517990 TNFRSF18Q9Y5U5 241 aa4.37□□□□□ -1.71
PABPC1-204ENST00000517990 DMBT1Q9UGM3 2413 aaPredicted RBP4.36□□□□□ -1.71
PABPC1-204ENST00000517990 SMIM30A4D0T7 59 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 F5H768 121 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 INS-IGF2F8WCM5 200 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 M0QYG6 137 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 TMEM127O75204 238 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 FCER2P06734 321 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 SLC25A4P12235 298 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 PSMB9P28065 219 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 AKR1C2P52895 323 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 FXYD7P58549 80 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 YPEL3P61236 119 aaPredicted RBP4.36□□□□□ -1.71
PABPC1-204ENST00000517990 PSG9Q00887 426 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 PHLDA2Q53GA4 152 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 NOXA1Q86UR1 476 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 RNASE11Q8TAA1 199 aaKnown RBP4.36□□□□□ -1.71
PABPC1-204ENST00000517990 GLMPQ8WWB7 406 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 SEC22AQ96IW7 307 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 SAV1Q9H4B6 383 aaPredicted RBP4.36□□□□□ -1.71
PABPC1-204ENST00000517990 AUNIPQ9H7T9 357 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 Q9H8V8 135 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 SSR3Q9UNL2 185 aa4.36□□□□□ -1.71
PABPC1-204ENST00000517990 A0A1W2PPQ1 181 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms