RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 INS-IGF2F8WCM5 200 aa14.33□□□□□ -0.12
SQSTM1-215ENST00000514093 SCGB2A1O75556 95 aa14.33□□□□□ -0.12
SQSTM1-215ENST00000514093 IGKV1-5P01602 117 aa14.33□□□□□ -0.12
SQSTM1-215ENST00000514093 OXA1LQ15070 435 aa14.33□□□□□ -0.12
SQSTM1-215ENST00000514093 Q8WTZ3 238 aa14.33□□□□□ -0.12
SQSTM1-215ENST00000514093 NAT1P18440 290 aa14.32□□□□□ -0.12
SQSTM1-215ENST00000514093 FAM3BP58499 235 aaPredicted RBP14.32□□□□□ -0.12
SQSTM1-215ENST00000514093 TAS2R20P59543 309 aa14.32□□□□□ -0.12
SQSTM1-215ENST00000514093 TSPAN5P62079 268 aa14.32□□□□□ -0.12
SQSTM1-215ENST00000514093 DHODHQ02127 395 aa14.32□□□□□ -0.12
SQSTM1-215ENST00000514093 USF2Q15853 346 aaPredicted RBP14.32□□□□□ -0.12
SQSTM1-215ENST00000514093 LPCAT3Q6P1A2 487 aa14.32□□□□□ -0.12
SQSTM1-215ENST00000514093 GSG1LQ6UXU4 331 aa14.32□□□□□ -0.12
SQSTM1-215ENST00000514093 SIGLEC15Q6ZMC9 328 aa14.32□□□□□ -0.12
SQSTM1-215ENST00000514093 TRAV30A0A087WSZ9 112 aa14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 LOC100506127A0A0U1RQW1 187 aa14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 LOC102723971A0A1B0GUV8 181 aa14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 ANKRD65E5RJM6 399 aa14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 IGLC1P0CG04 106 aa14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 NKX2-1P43699 371 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 RPL5P46777 297 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 DAD1P61803 113 aa14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 SPARTQ8N0X7 666 aa14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 ZNF709Q8N972 641 aa14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 OR4B1Q8NGF8 309 aa14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 ZNRF2Q8NHG8 242 aa14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 S100A16Q96FQ6 103 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 LINC00052Q96N35 136 aa14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 PDCD10Q9BUL8 212 aa14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 SLC35B3Q9H1N7 401 aa14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 SEPSECSQ9HD40 501 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-215ENST00000514093 IL4P05112 153 aa14.3□□□□□ -0.12
SQSTM1-215ENST00000514093 HSPA13P48723 471 aa14.3□□□□□ -0.12
SQSTM1-215ENST00000514093 C1orf158Q8N1D5 194 aa14.3□□□□□ -0.12
SQSTM1-215ENST00000514093 C15orf53Q8NAA6 179 aa14.3□□□□□ -0.12
SQSTM1-215ENST00000514093 ENY2Q9NPA8 101 aa14.3□□□□□ -0.12
SQSTM1-215ENST00000514093 BUB3O43684 328 aa14.29□□□□□ -0.12
SQSTM1-215ENST00000514093 HBE1P02100 147 aa14.29□□□□□ -0.12
SQSTM1-215ENST00000514093 P0C879 139 aa14.29□□□□□ -0.12
SQSTM1-215ENST00000514093 RND2P52198 227 aa14.29□□□□□ -0.12
SQSTM1-215ENST00000514093 AKR1C2P52895 323 aa14.29□□□□□ -0.12
SQSTM1-215ENST00000514093 TMEM69Q5SWH9 247 aa14.29□□□□□ -0.12
SQSTM1-215ENST00000514093 PRSS54Q6PEW0 395 aa14.29□□□□□ -0.12
SQSTM1-215ENST00000514093 OR1S2Q8NGQ3 325 aa14.29□□□□□ -0.12
SQSTM1-215ENST00000514093 C7orf50Q9BRJ6 194 aaKnown RBP14.29□□□□□ -0.12
SQSTM1-215ENST00000514093 SAV1Q9H4B6 383 aaPredicted RBP14.29□□□□□ -0.12
SQSTM1-215ENST00000514093 GOLT1BQ9Y3E0 138 aa14.29□□□□□ -0.12
SQSTM1-215ENST00000514093 OR10J1P30954 320 aa14.28□□□□□ -0.12
SQSTM1-215ENST00000514093 WDR12Q9GZL7 423 aaKnown RBP14.28□□□□□ -0.12
SQSTM1-215ENST00000514093 PI3P19957 117 aa14.27□□□□□ -0.13
SQSTM1-215ENST00000514093 PRSS3P35030 304 aa14.27□□□□□ -0.13
SQSTM1-215ENST00000514093 KRTAP10-2P60368 255 aa14.27□□□□□ -0.13
SQSTM1-215ENST00000514093 YPEL3P61236 119 aaPredicted RBP14.27□□□□□ -0.13
SQSTM1-215ENST00000514093 RRN3P1Q2M238 152 aa14.27□□□□□ -0.13
SQSTM1-215ENST00000514093 BSXQ3C1V8 233 aa14.27□□□□□ -0.13
SQSTM1-215ENST00000514093 TP53RKQ96S44 253 aa14.27□□□□□ -0.13
SQSTM1-215ENST00000514093 RPS10-NUDT3A0A1W2PQS6 291 aa14.26□□□□□ -0.13
SQSTM1-215ENST00000514093 NUDT3O95989 172 aa14.26□□□□□ -0.13
SQSTM1-215ENST00000514093 PRM2P04554 102 aa14.26□□□□□ -0.13
SQSTM1-215ENST00000514093 UCP3P55916 312 aa14.26□□□□□ -0.13
SQSTM1-215ENST00000514093 GABARAPL2P60520 117 aa14.26□□□□□ -0.13
SQSTM1-215ENST00000514093 IZUMO2Q6UXV1 221 aa14.26□□□□□ -0.13
SQSTM1-215ENST00000514093 FOXI2Q6ZQN5 318 aa14.26□□□□□ -0.13
SQSTM1-215ENST00000514093 A0A0G2JRQ6 117 aa14.25□□□□□ -0.13
SQSTM1-215ENST00000514093 F6UB75 175 aa14.25□□□□□ -0.13
SQSTM1-215ENST00000514093 PGAM2P15259 253 aa14.25□□□□□ -0.13
SQSTM1-215ENST00000514093 UBE2NLQ5JXB2 153 aa14.25□□□□□ -0.13
SQSTM1-215ENST00000514093 EPM2AB3EWF7 344 aa14.24□□□□□ -0.13
SQSTM1-215ENST00000514093 NXPH3O95157 252 aa14.24□□□□□ -0.13
SQSTM1-215ENST00000514093 RORCP51449 518 aa14.24□□□□□ -0.13
SQSTM1-215ENST00000514093 PSG9Q00887 426 aa14.24□□□□□ -0.13
SQSTM1-215ENST00000514093 SP6Q3SY56 376 aa14.24□□□□□ -0.13
SQSTM1-215ENST00000514093 FAM78BQ5VT40 261 aa14.24□□□□□ -0.13
SQSTM1-215ENST00000514093 SAMD12Q8N8I0 201 aa14.24□□□□□ -0.13
SQSTM1-215ENST00000514093 FCGR1BQ92637 280 aa14.24□□□□□ -0.13
SQSTM1-215ENST00000514093 MAGT1Q9H0U3 335 aa14.24□□□□□ -0.13
SQSTM1-215ENST00000514093 LINC00588Q9Y4M8 146 aa14.24□□□□□ -0.13
SQSTM1-215ENST00000514093 DMBT1Q9UGM3 2413 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-215ENST00000514093 RD3LP0DJH9 198 aa14.23□□□□□ -0.13
SQSTM1-215ENST00000514093 TGFBR1P36897 503 aa14.23□□□□□ -0.13
SQSTM1-215ENST00000514093 OR51G1Q8NGK1 321 aa14.23□□□□□ -0.13
SQSTM1-215ENST00000514093 COQ8AQ8NI60 647 aa14.23□□□□□ -0.13
SQSTM1-215ENST00000514093 NPIPB3Q92617 1050 aa14.23□□□□□ -0.13
SQSTM1-215ENST00000514093 KLK11Q9UBX7 282 aa14.23□□□□□ -0.13
SQSTM1-215ENST00000514093 F5H768 121 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 M0QYG6 137 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 GSTZ1O43708 216 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 DEFB130BP0DP73 79 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 DEFB130AP0DP74 79 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 PSG1P11464 419 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 SLC25A4P12235 298 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 ID1P41134 155 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 HTR2BP41595 481 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 PIGPP57054 158 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 ZNF79Q15937 498 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 TRIM16LQ309B1 348 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 GPX8Q8TED1 209 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 ACY3Q96HD9 319 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 CLUHP3Q96NS8 147 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 TMEM208Q9BTX3 173 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms