RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 CD69Q07108 199 aa12.94□□□□□ -0.34
SCLT1-208ENST00000506368 PPP1R32Q7Z5V6 425 aa12.94□□□□□ -0.34
SCLT1-208ENST00000506368 PRSS22Q9GZN4 317 aa12.94□□□□□ -0.34
SCLT1-208ENST00000506368 MGST3O14880 152 aa12.93□□□□□ -0.34
SCLT1-208ENST00000506368 NEGR1Q7Z3B1 354 aa12.93□□□□□ -0.34
SCLT1-208ENST00000506368 OR1B1Q8NGR6 318 aa12.93□□□□□ -0.34
SCLT1-208ENST00000506368 TNFRSF14Q92956 283 aa12.93□□□□□ -0.34
SCLT1-208ENST00000506368 GPR82Q96P67 336 aa12.93□□□□□ -0.34
SCLT1-208ENST00000506368 PAXXQ9BUH6 204 aa12.93□□□□□ -0.34
SCLT1-208ENST00000506368 SSBP4Q9BWG4 385 aaPredicted RBP12.93□□□□□ -0.34
SCLT1-208ENST00000506368 CEP295Q9C0D2 2601 aa12.93□□□□□ -0.34
SCLT1-208ENST00000506368 WNT9BO14905 357 aa12.93□□□□□ -0.34
SCLT1-208ENST00000506368 TET2Q6N021 2002 aaPredicted RBP12.93□□□□□ -0.34
SCLT1-208ENST00000506368 NCOR2Q9Y618 2525 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 IGKV1OR2-108A0A075B7D4 117 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 A0A087X0K7 114 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 INS-IGF2F8WCM5 200 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 LOXL3P58215 753 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 RBPJQ06330 500 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 Q0VFX4 171 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 RPL39P5Q59GN2 51 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 VHLLQ6RSH7 139 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 RBPMS2Q6ZRY4 209 aaKnown RBP12.92□□□□□ -0.34
SCLT1-208ENST00000506368 C2orf91Q6ZV80 131 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 ERASQ7Z444 233 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 OR9G4Q8NGQ1 327 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 SCNM1Q9BWG6 230 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 DIDO1Q9BTC0 2240 aaKnown RBP12.92□□□□□ -0.34
SCLT1-208ENST00000506368 LOC102724200A0A096LPH7 203 aaPredicted RBP12.92□□□□□ -0.34
SCLT1-208ENST00000506368 MYCNOSP40205 109 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 TMEM30BQ3MIR4 351 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 PSMG4Q5JS54 123 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 GCSAMQ8N6F7 178 aa12.92□□□□□ -0.34
SCLT1-208ENST00000506368 UPK2O00526 184 aa12.91□□□□□ -0.34
SCLT1-208ENST00000506368 PRDX2P32119 198 aa12.91□□□□□ -0.34
SCLT1-208ENST00000506368 CSN1S1P47710 185 aa12.91□□□□□ -0.34
SCLT1-208ENST00000506368 INO80CQ6PI98 192 aaPredicted RBP12.91□□□□□ -0.34
SCLT1-208ENST00000506368 CLEC2AQ6UVW9 174 aa12.91□□□□□ -0.34
SCLT1-208ENST00000506368 KLF14Q8TD94 323 aaPredicted RBP12.91□□□□□ -0.34
SCLT1-208ENST00000506368 FMC1Q96HJ9 113 aa12.91□□□□□ -0.34
SCLT1-208ENST00000506368 MLST8Q9BVC4 326 aa12.91□□□□□ -0.34
SCLT1-208ENST00000506368 LOC400499M0QZD8 3231 aa12.91□□□□□ -0.34
SCLT1-208ENST00000506368 CACNA1AO00555 2505 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 CHEK1O14757 476 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 COX7A2P2O60397 106 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 HSD52Q0P140 79 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 PSG3Q16557 428 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 TPRX1Q8N7U7 411 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 SARAFQ96BY9 339 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 FAM234AQ9H0X4 552 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 SDK2Q58EX2 2172 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 SRRM4A7MD48 611 aaKnown RBP12.9□□□□□ -0.34
SCLT1-208ENST00000506368 VWC2LB2RUY7 222 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 P01737 135 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 APOA2P02652 100 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 C10orf113Q5VZT2 155 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 ZNF826PQ6ZT77 177 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 OR4X2Q8NGF9 303 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 OR2K2Q8NGT1 345 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 JKAMPQ9P055 326 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 ABI3Q9P2A4 366 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 EPDR1Q9UM22 224 aa12.9□□□□□ -0.34
SCLT1-208ENST00000506368 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.89□□□□□ -0.35
SCLT1-208ENST00000506368 A0A1B0GW15 77 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 C19orf71A6NCJ1 209 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 HAX1O00165 279 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 FAM87AP0C7U9 286 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 MPV17P39210 176 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 ALKBH6Q3KRA9 238 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 C5orf17Q8NAS9 161 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 GATD1Q8NB37 220 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 LRRC29Q8WV35 223 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 LINC00479Q96M42 142 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 SH2D7A6NKC9 451 aaPredicted RBP12.89□□□□□ -0.35
SCLT1-208ENST00000506368 SAP30O75446 220 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 RNASE2P10153 161 aaKnown RBP12.89□□□□□ -0.35
SCLT1-208ENST00000506368 EDDM3AQ14507 147 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 LTC4SQ16873 150 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 LHFPL4Q7Z7J7 247 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 CD177Q8N6Q3 437 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 METRNQ9UJH8 293 aa12.89□□□□□ -0.35
SCLT1-208ENST00000506368 ZNF134P52741 427 aa12.88□□□□□ -0.35
SCLT1-208ENST00000506368 RIPPLY3P57055 190 aa12.88□□□□□ -0.35
SCLT1-208ENST00000506368 LINC00173Q6ZV60 143 aa12.88□□□□□ -0.35
SCLT1-208ENST00000506368 PDPNQ86YL7 162 aa12.88□□□□□ -0.35
SCLT1-208ENST00000506368 OR10AG1Q8NH19 301 aa12.88□□□□□ -0.35
SCLT1-208ENST00000506368 VSTM2AQ8TAG5 236 aa12.88□□□□□ -0.35
SCLT1-208ENST00000506368 FXYD5Q96DB9 178 aa12.88□□□□□ -0.35
SCLT1-208ENST00000506368 DAZAP1Q96EP5 407 aaKnown RBP12.88□□□□□ -0.35
SCLT1-208ENST00000506368 HINT2Q9BX68 163 aa12.88□□□□□ -0.35
SCLT1-208ENST00000506368 TTTY12Q9BZ98 90 aa12.88□□□□□ -0.35
SCLT1-208ENST00000506368 AHCTF1Q8WYP5 2266 aa12.88□□□□□ -0.35
SCLT1-208ENST00000506368 FREM1Q5H8C1 2179 aa12.87□□□□□ -0.35
SCLT1-208ENST00000506368 NPIPB6E9PJ23 425 aa12.87□□□□□ -0.35
SCLT1-208ENST00000506368 FOXA3P55318 350 aaPredicted RBP12.87□□□□□ -0.35
SCLT1-208ENST00000506368 ERHP84090 104 aaKnown RBP12.87□□□□□ -0.35
SCLT1-208ENST00000506368 OR9G1Q8NH87 305 aa12.87□□□□□ -0.35
SCLT1-208ENST00000506368 FAM222BQ8WU58 562 aa12.87□□□□□ -0.35
SCLT1-208ENST00000506368 ZNF747Q9BV97 191 aa12.87□□□□□ -0.35
SCLT1-208ENST00000506368 AP5S1Q9NUS5 200 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms