RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 BPGMP07738 259 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 MSMBP08118 114 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 HLA-DMBP28068 263 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 CRYBA4P53673 196 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 TPI1P60174 286 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 PABPC1L2AQ5JQF8 200 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 AKR1C8PQ5T2L2 129 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 ZNF767PQ75MW2 155 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 OR5J2Q8NH18 312 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 SLC25A40Q8TBP6 338 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 MRPL40Q9NQ50 206 aaKnown RBP2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 LYRM2Q9NU23 88 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 CYSLTR1Q9Y271 337 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 TIMM9Q9Y5J7 89 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 DAPK1P53355 1430 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 ANKRD50Q9ULJ7 1429 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 KCPQ6ZWJ8 1503 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 FMN2Q9NZ56 1722 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 PARP4Q9UKK3 1724 aaKnown RBP2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 CLTCL1P53675 1640 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 C10orf71Q711Q0 1435 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 TRBV19A0A075B6N1 114 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 IGKV1D-43A0A0B4J1Z2 117 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 TRAV38-1A0A0B4J264 116 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 PPP5D1E7EU14 171 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 H0YJX3 145 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 AIPO00170 330 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 NDUFC2O95298 119 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 IFNA7P01567 189 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 TFPTP0C1Z6 253 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 SMIM17P0DL12 118 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 CCL5P13501 91 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 SPI1P17947 270 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 NFYAP23511 347 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 SERPINB1P30740 379 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 PHBP35232 272 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 LYRM7Q5U5X0 104 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 LYZL1Q6UWQ5 148 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 SLC35E3Q7Z769 313 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 LINC00304Q8N9R0 145 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 MRPS24Q96EL2 167 aaKnown RBP2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 IMMP2LQ96T52 175 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 TMEM70Q9BUB7 260 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 TUBA4BQ9H853 241 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 RNF122Q9H9V4 155 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 PRNDQ9UKY0 176 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 HHLA3Q9XRX5 114 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 UFC1Q9Y3C8 167 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 RBM7Q9Y580 266 aaKnown RBP2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 TIMM22Q9Y584 194 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
TRAPPC13-208ENST00000505553 LRRC37A3O60309 1634 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 PXDNLA1KZ92 1463 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 BCL9O00512 1426 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 ANKARQ7Z5J8 1434 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 TRAV4A0A0B4J268 109 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 ODF3BA8MYP8 253 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 E7EQL1 145 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 SLC22A1O15245 554 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 CIAO1O76071 339 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 S100A4P26447 101 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 CASP1P29466 404 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 CCR2P41597 374 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 GABRA4P48169 554 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 NCALDP61601 193 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 TFAMQ00059 246 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 GRINAQ7Z429 371 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 AKAP14Q86UN6 197 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 DYNAPQ8N1N2 210 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 STX19Q8N4C7 294 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 SMIM20Q8N5G0 67 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 RASSF5Q8WWW0 418 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 GPER1Q99527 375 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 OR8D2Q9GZM6 311 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 SH3BGRL3Q9H299 93 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 SLC39A9Q9NUM3 307 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 TP73-AS1Q9UF72 201 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 NAT8Q9UHE5 227 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 SMPXQ9UHP9 88 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 SSR3Q9UNL2 185 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 ZNF638Q14966 1978 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 PEAK1Q9H792 1746 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 E9PCH4 1651 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 PAPPAQ13219 1627 aa2.04□□□□□ -2.08
TRAPPC13-208ENST00000505553 TONSLQ96HA7 1378 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 SIPA1L1O43166 1804 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 H3BT86 120 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 H7C1C5 153 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 LGALS1P09382 135 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 IDO1P14902 403 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 G6PCP35575 357 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 RPL28P46779 137 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 YPEL3P61236 119 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 LCN6P62502 163 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 RHOBP62745 196 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 AGTRAPQ6RW13 159 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 TRAPPC6BQ86SZ2 158 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 SCGB3A1Q96QR1 104 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 PBDC1Q9BVG4 233 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 IMUPQ9GZP8 106 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms