RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 LSM5Q9Y4Y9 91 aaKnown RBP10.27□□□□□ -0.77
FDPS-219ENST00000495308 PUS1Q9Y606 427 aaKnown RBP eCLIP10.27□□□□□ -0.77
FDPS-219ENST00000495308 IGHV3-49A0A0A0MS15 119 aa10.26□□□□□ -0.77
FDPS-219ENST00000495308 GOSR2O14653 212 aa10.26□□□□□ -0.77
FDPS-219ENST00000495308 SIX6O95475 246 aa10.26□□□□□ -0.77
FDPS-219ENST00000495308 PTTG1O95997 202 aa10.26□□□□□ -0.77
FDPS-219ENST00000495308 IGKV1-17P01599 117 aa10.26□□□□□ -0.77
FDPS-219ENST00000495308 IGLC1P0CG04 106 aa10.26□□□□□ -0.77
FDPS-219ENST00000495308 C8orf88P0DMB2 117 aa10.26□□□□□ -0.77
FDPS-219ENST00000495308 OR10J1P30954 320 aa10.26□□□□□ -0.77
FDPS-219ENST00000495308 PAX9P55771 341 aa10.26□□□□□ -0.77
FDPS-219ENST00000495308 RPP30P78346 268 aaKnown RBP10.26□□□□□ -0.77
FDPS-219ENST00000495308 DEFB121Q5J5C9 76 aa10.26□□□□□ -0.77
FDPS-219ENST00000495308 LCN12Q6JVE5 192 aa10.26□□□□□ -0.77
FDPS-219ENST00000495308 GSG1LQ6UXU4 331 aa10.26□□□□□ -0.77
FDPS-219ENST00000495308 TMEM116Q8NCL8 245 aa10.26□□□□□ -0.77
FDPS-219ENST00000495308 MRPL27Q9P0M9 148 aaKnown RBP10.26□□□□□ -0.77
FDPS-219ENST00000495308 TRAV30A0A087WSZ9 112 aa10.25□□□□□ -0.77
FDPS-219ENST00000495308 PRSS46E5RG02 174 aa10.25□□□□□ -0.77
FDPS-219ENST00000495308 K7EPK0 472 aa10.25□□□□□ -0.77
FDPS-219ENST00000495308 SCGB2A1O75556 95 aa10.25□□□□□ -0.77
FDPS-219ENST00000495308 CCNKO75909 580 aa10.25□□□□□ -0.77
FDPS-219ENST00000495308 GPX4P36969 197 aaPredicted RBP10.25□□□□□ -0.77
FDPS-219ENST00000495308 GAMTQ14353 236 aa10.25□□□□□ -0.77
FDPS-219ENST00000495308 TMEM61Q8N0U2 210 aa10.25□□□□□ -0.77
FDPS-219ENST00000495308 OR1S2Q8NGQ3 325 aa10.25□□□□□ -0.77
FDPS-219ENST00000495308 OR2K2Q8NGT1 345 aa10.25□□□□□ -0.77
FDPS-219ENST00000495308 MARC2Q969Z3 335 aa10.25□□□□□ -0.77
FDPS-219ENST00000495308 WDR89Q96FK6 387 aaPredicted RBP10.25□□□□□ -0.77
FDPS-219ENST00000495308 SLC35E1Q96K37 410 aa10.25□□□□□ -0.77
FDPS-219ENST00000495308 SMIM8Q96KF7 97 aa10.25□□□□□ -0.77
FDPS-219ENST00000495308 TECRQ9NZ01 308 aaKnown RBP10.25□□□□□ -0.77
FDPS-219ENST00000495308 HUWE1Q7Z6Z7 4374 aaKnown RBP10.24□□□□□ -0.77
FDPS-219ENST00000495308 IGHV3OR16-13A0A075B7E8 117 aa10.24□□□□□ -0.77
FDPS-219ENST00000495308 IGHV3-74A0A0B4J1X5 117 aa10.24□□□□□ -0.77
FDPS-219ENST00000495308 C7orf66A4D0T2 115 aa10.24□□□□□ -0.77
FDPS-219ENST00000495308 K7EMT4 169 aa10.24□□□□□ -0.77
FDPS-219ENST00000495308 S100A10P60903 97 aa10.24□□□□□ -0.77
FDPS-219ENST00000495308 GUCA2BQ16661 112 aa10.24□□□□□ -0.77
FDPS-219ENST00000495308 OR8G2PQ6IF36 304 aa10.24□□□□□ -0.77
FDPS-219ENST00000495308 RAB40CQ96S21 281 aa10.24□□□□□ -0.77
FDPS-219ENST00000495308 LSM4Q9Y4Z0 139 aaKnown RBP10.24□□□□□ -0.77
FDPS-219ENST00000495308 IGKV1D-37A0A075B6S9 117 aa10.23□□□□□ -0.77
FDPS-219ENST00000495308 TRAV14DV4A0A0A6YYC5 116 aa10.23□□□□□ -0.77
FDPS-219ENST00000495308 IGHV7-4-1A0A0J9YVY3 117 aa10.23□□□□□ -0.77
FDPS-219ENST00000495308 ZNF785A8K8V0 405 aa10.23□□□□□ -0.77
FDPS-219ENST00000495308 SSNA1O43805 119 aa10.23□□□□□ -0.77
FDPS-219ENST00000495308 SCAF4O95104 1147 aaKnown RBP10.23□□□□□ -0.77
FDPS-219ENST00000495308 APOHP02749 345 aaPredicted RBP10.23□□□□□ -0.77
FDPS-219ENST00000495308 METTL15P1P0C7V9 234 aa10.23□□□□□ -0.77
FDPS-219ENST00000495308 RAB32Q13637 225 aa10.23□□□□□ -0.77
FDPS-219ENST00000495308 TMEM14EPQ6UXP3 125 aa10.23□□□□□ -0.77
FDPS-219ENST00000495308 ACOT7LQ6ZUV0 252 aa10.23□□□□□ -0.77
FDPS-219ENST00000495308 GINS3Q9BRX5 216 aa10.23□□□□□ -0.77
FDPS-219ENST00000495308 SMPXQ9UHP9 88 aa10.23□□□□□ -0.77
FDPS-219ENST00000495308 ALG5Q9Y673 324 aa10.23□□□□□ -0.77
FDPS-219ENST00000495308 IGHV3-66A0A0C4DH42 116 aa10.22□□□□□ -0.77
FDPS-219ENST00000495308 ZFP92A6NM28 416 aa10.22□□□□□ -0.77
FDPS-219ENST00000495308 PMS2P5A8MQ11 134 aa10.22□□□□□ -0.77
FDPS-219ENST00000495308 L7N2F9 121 aa10.22□□□□□ -0.77
FDPS-219ENST00000495308 TSC22D2O75157 780 aa10.22□□□□□ -0.77
FDPS-219ENST00000495308 TAS2R30P59541 319 aa10.22□□□□□ -0.77
FDPS-219ENST00000495308 YPEL3P61236 119 aaPredicted RBP10.22□□□□□ -0.77
FDPS-219ENST00000495308 VAMP2P63027 116 aa10.22□□□□□ -0.77
FDPS-219ENST00000495308 ZNF90Q03938 601 aa10.22□□□□□ -0.77
FDPS-219ENST00000495308 IL15RAQ13261 267 aa10.22□□□□□ -0.77
FDPS-219ENST00000495308 DCTN2Q13561 401 aaKnown RBP10.22□□□□□ -0.77
FDPS-219ENST00000495308 Q8WTZ3 238 aa10.22□□□□□ -0.77
FDPS-219ENST00000495308 RHPN1-AS1Q9BWJ2 59 aa10.22□□□□□ -0.77
FDPS-219ENST00000495308 IGKV1OR2-108A0A075B7D4 117 aa10.21□□□□□ -0.77
FDPS-219ENST00000495308 SMCO3A2RU48 225 aa10.21□□□□□ -0.77
FDPS-219ENST00000495308 CHEK1O14757 476 aa10.21□□□□□ -0.77
FDPS-219ENST00000495308 TOMM40O96008 361 aa10.21□□□□□ -0.77
FDPS-219ENST00000495308 IL4P05112 153 aa10.21□□□□□ -0.77
FDPS-219ENST00000495308 H2BFSP57053 126 aa10.21□□□□□ -0.77
FDPS-219ENST00000495308 CD81P60033 236 aa10.21□□□□□ -0.77
FDPS-219ENST00000495308 RRAS2P62070 204 aaPredicted RBP10.21□□□□□ -0.77
FDPS-219ENST00000495308 RBPMS2Q6ZRY4 209 aaKnown RBP10.21□□□□□ -0.77
FDPS-219ENST00000495308 Q8N1Y9 231 aa10.21□□□□□ -0.77
FDPS-219ENST00000495308 ST8SIA2Q92186 375 aa10.21□□□□□ -0.77
FDPS-219ENST00000495308 RNF2Q99496 336 aa10.21□□□□□ -0.77
FDPS-219ENST00000495308 C11orf1Q9H5F2 150 aa10.21□□□□□ -0.77
FDPS-219ENST00000495308 MGAT4CQ9UBM8 478 aa10.21□□□□□ -0.77
FDPS-219ENST00000495308 CD7P09564 240 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 RD3LP0DJH9 198 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 PSG1P11464 419 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 BCAP31P51572 246 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 CAV2P51636 162 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 AKR1C1Q04828 323 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 ARL16Q0P5N6 197 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 OR2F1Q13607 317 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 USF2Q15853 346 aaPredicted RBP10.2□□□□□ -0.78
FDPS-219ENST00000495308 LRRC37A5PQ49AS3 106 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 GTSCR1Q86UQ5 136 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 THAP8Q8NA92 274 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 METTL26Q96S19 204 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 NMES1Q9C002 83 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 SMAD5-AS1Q9Y6J3 95 aa10.2□□□□□ -0.78
FDPS-219ENST00000495308 IGKV3-7A0A075B6H7 116 aa10.19□□□□□ -0.78
FDPS-219ENST00000495308 TRAV25A0A0B4J276 109 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms