RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 RPS25P62851 125 aaKnown RBP9.33□□□□□ -0.92
EXOSC3-207ENST00000490516 PRCDQ00LT1 54 aa9.33□□□□□ -0.92
EXOSC3-207ENST00000490516 CADM3Q8N126 398 aa9.33□□□□□ -0.92
EXOSC3-207ENST00000490516 RXFP4Q8TDU9 374 aa9.33□□□□□ -0.92
EXOSC3-207ENST00000490516 RNF125Q96EQ8 232 aa9.33□□□□□ -0.92
EXOSC3-207ENST00000490516 SCPEP1Q9HB40 452 aa9.33□□□□□ -0.92
EXOSC3-207ENST00000490516 ARL6IP5O75915 188 aa9.32□□□□□ -0.92
EXOSC3-207ENST00000490516 RANBP1P43487 201 aa9.32□□□□□ -0.92
EXOSC3-207ENST00000490516 ERHP84090 104 aaKnown RBP9.32□□□□□ -0.92
EXOSC3-207ENST00000490516 ARL6IP1Q15041 203 aa9.32□□□□□ -0.92
EXOSC3-207ENST00000490516 LAIR2Q6ISS4 152 aa9.32□□□□□ -0.92
EXOSC3-207ENST00000490516 TSPAN14Q8NG11 270 aa9.32□□□□□ -0.92
EXOSC3-207ENST00000490516 IGF2BP2-AS1Q96M15 143 aa9.32□□□□□ -0.92
EXOSC3-207ENST00000490516 TSC22D3Q99576 134 aa9.32□□□□□ -0.92
EXOSC3-207ENST00000490516 WDR12Q9GZL7 423 aaKnown RBP9.32□□□□□ -0.92
EXOSC3-207ENST00000490516 GNG2P59768 71 aa9.31□□□□□ -0.92
EXOSC3-207ENST00000490516 OR4X1Q8NH49 305 aa9.31□□□□□ -0.92
EXOSC3-207ENST00000490516 MND1Q9BWT6 205 aa9.31□□□□□ -0.92
EXOSC3-207ENST00000490516 LSM2Q9Y333 95 aaKnown RBP9.31□□□□□ -0.92
EXOSC3-207ENST00000490516 IGLV5-52A0A0A0MRZ9 124 aa9.3□□□□□ -0.92
EXOSC3-207ENST00000490516 SIVA1O15304 175 aa9.3□□□□□ -0.92
EXOSC3-207ENST00000490516 BUB3O43684 328 aa9.3□□□□□ -0.92
EXOSC3-207ENST00000490516 PGLYRP1O75594 196 aaPredicted RBP9.3□□□□□ -0.92
EXOSC3-207ENST00000490516 CIB2O75838 187 aa9.3□□□□□ -0.92
EXOSC3-207ENST00000490516 M6PRP20645 277 aa9.3□□□□□ -0.92
EXOSC3-207ENST00000490516 TSPOP30536 169 aa9.3□□□□□ -0.92
EXOSC3-207ENST00000490516 SPHARQ15513 63 aa9.3□□□□□ -0.92
EXOSC3-207ENST00000490516 BEST4Q8NFU0 473 aa9.3□□□□□ -0.92
EXOSC3-207ENST00000490516 OR4A16Q8NH70 328 aa9.3□□□□□ -0.92
EXOSC3-207ENST00000490516 CYGBQ8WWM9 190 aa9.3□□□□□ -0.92
EXOSC3-207ENST00000490516 ABHD1Q96SE0 405 aa9.3□□□□□ -0.92
EXOSC3-207ENST00000490516 LRP2P98164 4655 aa9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 A0A0J9YX75 114 aa9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 IFITM5A6NNB3 132 aa9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 ZNF701M0R085 212 aaPredicted RBP9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 FCER2P06734 321 aa9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 SNCAP37840 140 aa9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 OPRK1P41145 380 aa9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 PAX9P55771 341 aa9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 HSPE1P61604 102 aaKnown RBP9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 DHODHQ02127 395 aa9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 SPATA31B1PQ5VZV4 182 aa9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 EBLN2Q6P2I7 272 aa9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 AMTNQ6UX39 209 aa9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 COQ8AQ8NI60 647 aa9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 UFD1Q92890 307 aa9.29□□□□□ -0.92
EXOSC3-207ENST00000490516 SCGB2A1O75556 95 aa9.28□□□□□ -0.92
EXOSC3-207ENST00000490516 IL4P05112 153 aa9.28□□□□□ -0.92
EXOSC3-207ENST00000490516 HOXA5P20719 270 aa9.28□□□□□ -0.92
EXOSC3-207ENST00000490516 ID1P41134 155 aa9.28□□□□□ -0.92
EXOSC3-207ENST00000490516 PSMB3P49720 205 aa9.28□□□□□ -0.92
EXOSC3-207ENST00000490516 FABP5Q01469 135 aa9.28□□□□□ -0.92
EXOSC3-207ENST00000490516 NFE4Q86UQ8 179 aa9.28□□□□□ -0.92
EXOSC3-207ENST00000490516 Q8WTZ3 238 aa9.28□□□□□ -0.92
EXOSC3-207ENST00000490516 FKBP14Q9NWM8 211 aa9.28□□□□□ -0.92
EXOSC3-207ENST00000490516 M0R2Z0 102 aa9.27□□□□□ -0.93
EXOSC3-207ENST00000490516 SOCS3O14543 225 aa9.27□□□□□ -0.93
EXOSC3-207ENST00000490516 CRXO43186 299 aaPredicted RBP9.27□□□□□ -0.93
EXOSC3-207ENST00000490516 RNASE2P10153 161 aaKnown RBP9.27□□□□□ -0.93
EXOSC3-207ENST00000490516 ELK1P19419 428 aa9.27□□□□□ -0.93
EXOSC3-207ENST00000490516 SPINK13Q1W4C9 94 aa9.27□□□□□ -0.93
EXOSC3-207ENST00000490516 SEC22AQ96IW7 307 aa9.27□□□□□ -0.93
EXOSC3-207ENST00000490516 PLCXD1Q9NUJ7 323 aa9.27□□□□□ -0.93
EXOSC3-207ENST00000490516 KLK11Q9UBX7 282 aa9.27□□□□□ -0.93
EXOSC3-207ENST00000490516 TRAV30A0A087WSZ9 112 aa9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 CORTO00230 105 aa9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 INSP01308 110 aa9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 IGLC1P0CG04 106 aa9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 KRTAP10-4P60372 401 aaPredicted RBP9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 IZUMO4Q1ZYL8 232 aa9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 ZFP1Q6P2D0 407 aa9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 H2BFWTQ7Z2G1 175 aa9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 BAP18Q8IXM2 172 aa9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 GPR146Q96CH1 333 aa9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 CCDC90BQ9GZT6 254 aa9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 NOP10Q9NPE3 64 aaKnown RBP9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 DOK5Q9P104 306 aa9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 DAPK2Q9UIK4 370 aa9.26□□□□□ -0.93
EXOSC3-207ENST00000490516 A8MTW9 85 aa9.25□□□□□ -0.93
EXOSC3-207ENST00000490516 CASQ2O14958 399 aaPredicted RBP9.25□□□□□ -0.93
EXOSC3-207ENST00000490516 IGKV1-39P01597 117 aa9.25□□□□□ -0.93
EXOSC3-207ENST00000490516 IGKV1D-39P04432 117 aa9.25□□□□□ -0.93
EXOSC3-207ENST00000490516 HSMCR30P0CW71 290 aa9.25□□□□□ -0.93
EXOSC3-207ENST00000490516 YPEL3P61236 119 aaPredicted RBP9.25□□□□□ -0.93
EXOSC3-207ENST00000490516 HERV-K104P61576 105 aa9.25□□□□□ -0.93
EXOSC3-207ENST00000490516 TRAM1Q15629 374 aa9.25□□□□□ -0.93
EXOSC3-207ENST00000490516 HOGA1Q86XE5 327 aa9.25□□□□□ -0.93
EXOSC3-207ENST00000490516 C20orf173Q96LM9 149 aa9.25□□□□□ -0.93
EXOSC3-207ENST00000490516 TIMM8BQ9Y5J9 83 aaPredicted RBP9.25□□□□□ -0.93
EXOSC3-207ENST00000490516 DNAH8Q96JB1 4490 aa9.24□□□□□ -0.93
EXOSC3-207ENST00000490516 TRAV12-2A0A075B6T6 113 aa9.24□□□□□ -0.93
EXOSC3-207ENST00000490516 A0A096LPF7 62 aa9.24□□□□□ -0.93
EXOSC3-207ENST00000490516 H3BNG1 76 aa9.24□□□□□ -0.93
EXOSC3-207ENST00000490516 PDCD5O14737 125 aa9.24□□□□□ -0.93
EXOSC3-207ENST00000490516 GSTZ1O43708 216 aaPredicted RBP9.24□□□□□ -0.93
EXOSC3-207ENST00000490516 NXPH4O95158 308 aa9.24□□□□□ -0.93
EXOSC3-207ENST00000490516 GNAO1P09471 354 aa9.24□□□□□ -0.93
EXOSC3-207ENST00000490516 HTN1P15515 57 aa9.24□□□□□ -0.93
EXOSC3-207ENST00000490516 OR10J1P30954 320 aa9.24□□□□□ -0.93
EXOSC3-207ENST00000490516 SUB1P53999 127 aaKnown RBP eCLIP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms