RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	GNB4	Q9HAV0	340 aa		10.06	□□□□□ -0.8
NR1H3-223	ENST00000486991	C21orf62	Q9NYP8	219 aa		10.06	□□□□□ -0.8
NR1H3-223	ENST00000486991	TNFSF18	Q9UNG2	199 aa		10.06	□□□□□ -0.8
NR1H3-223	ENST00000486991	HSPB11	Q9Y547	144 aa		10.06	□□□□□ -0.8
NR1H3-223	ENST00000486991	ANKRD34B	A5PLL1	514 aa		10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991	PRSS46	E5RG02	174 aa		10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991	C1QB	P02746	253 aa		10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991	GPX4	P36969	197 aa	Predicted RBP	10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991	MFAP4	P55083	255 aa		10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991	DLK1	P80370	383 aa		10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991	BAX	Q07812	192 aa		10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991	FHL3	Q13643	280 aa		10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991	ZFP69	Q49AA0	526 aa		10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991		Q56UQ5	140 aa		10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991	OR1S2	Q8NGQ3	325 aa		10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991	WWC2-AS2	Q96NR7	200 aa		10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991	AQP10	Q96PS8	301 aa		10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991	B9D2	Q9BPU9	175 aa		10.05	□□□□□ -0.8
NR1H3-223	ENST00000486991	TRBV7-1	A0A0A6YYK4	115 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	S100A11	P31949	105 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	NPBWR1	P48145	328 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	RND2	P52198	227 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	GAMT	Q14353	236 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	CLINT1	Q14677	625 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	C9orf66	Q5T8R8	295 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	ZNF343	Q6P1L6	599 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	CLEC19A	Q6UXS0	136 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	OR5C1	Q8NGR4	320 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	ZNF502	Q8TBZ5	544 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	CACNG8	Q8WXS5	425 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	NPIPB3	Q92617	1050 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	SMIM3	Q9BZL3	60 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	MFF	Q9GZY8	342 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	MRPL36	Q9P0J6	103 aa	Known RBP	10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	RYR2	Q92736	4967 aa		10.04	□□□□□ -0.8
NR1H3-223	ENST00000486991	RNF222	A6NCQ9	220 aa		10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991	OR2T8	A6NH00	312 aa		10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991	HMSD	A8MTL9	139 aa		10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991	GNG7	O60262	68 aa		10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991	LGALS1	P09382	135 aa	Known RBP	10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991	GPR183	P32249	361 aa		10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991	EIF2B2	P49770	351 aa	Known RBP	10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991	RUNX1	Q01196	453 aa		10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991	AKR1C1	Q04828	323 aa		10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991	ATP6V1F	Q16864	119 aa		10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991	OR11H1	Q8NG94	326 aa		10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991	CCDC140	Q96MF4	163 aa		10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991	TMEM147	Q9BVK8	224 aa		10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991	GGACT	Q9BVM4	153 aa		10.03	□□□□□ -0.8
NR1H3-223	ENST00000486991		I3L521	148 aa		10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	CLN5	O75503	358 aa		10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	TRBV12-3	P01733	135 aa		10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	CLEC3B	P05452	202 aa		10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	INSL3	P51460	131 aa		10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	TMEM116	Q8NCL8	245 aa		10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	OR1N2	Q8NGR9	330 aa		10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	OR4X1	Q8NH49	305 aa		10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	HYLS1	Q96M11	299 aa		10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	TXN2	Q99757	166 aa		10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	UQCC1	Q9NVA1	299 aa		10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	GAR1	Q9NY12	217 aa	Known RBP	10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	PEF1	Q9UBV8	284 aa	Known RBP	10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	FBXL17	Q9UF56	701 aa		10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	STAB2	Q8WWQ8	2551 aa		10.02	□□□□□ -0.81
NR1H3-223	ENST00000486991	DNAH7	Q8WXX0	4024 aa		10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	UBE2L5P	A0A1B0GUS4	154 aa		10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	PPP5D1	E7EU14	171 aa		10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	FNDC10	F2Z333	226 aa		10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991		F8W735	103 aa	Predicted RBP	10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	CXCL2	P19875	107 aa		10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	FCGR2B	P31994	310 aa	Predicted RBP	10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	ARL3	P36405	182 aa		10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	ZNF616	Q08AN1	781 aa		10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	OR2F1	Q13607	317 aa		10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	FAM209B	Q5JX69	171 aa		10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	PRR25	Q96S07	402 aa		10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	ATP5S	Q99766	215 aa		10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	ASCL2	Q99929	193 aa		10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	NPVF	Q9HCQ7	196 aa		10.01	□□□□□ -0.81
NR1H3-223	ENST00000486991	IGHV4OR15-8	A0A075B7B6	117 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991		A0A087WW49	117 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991	ZFP92	A6NM28	416 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991	SEC14L6	B5MCN3	397 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991	NUPL2	O15504	423 aa	Known RBP	10	□□□□□ -0.81
NR1H3-223	ENST00000486991	TGOLN2	O43493	480 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991	SCGB2A1	O75556	95 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991	DFFB	O76075	338 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991	OR10J1	P30954	320 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991	NKX2-5	P52952	324 aa	Predicted RBP	10	□□□□□ -0.81
NR1H3-223	ENST00000486991	TIGIT	Q495A1	244 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991	TMEM144	Q7Z5S9	345 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991	KCNRG	Q8N5I3	272 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991	ATP6V0B	Q99437	205 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991	CHRDL1	Q9BU40	450 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991	WFDC1	Q9HC57	220 aa		10	□□□□□ -0.81
NR1H3-223	ENST00000486991	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10	□□□□□ -0.81
NR1H3-223	ENST00000486991	TRAV30	A0A087WSZ9	112 aa		9.99	□□□□□ -0.81
NR1H3-223	ENST00000486991	IGHV3-35	A0A0C4DH35	117 aa		9.99	□□□□□ -0.81

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