RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 LOC102723971A0A1B0GUV8 181 aa11.38□□□□□ -0.59
DDX56-210ENST00000479440 HBE1P02100 147 aa11.38□□□□□ -0.59
DDX56-210ENST00000479440 AKR1C2P52895 323 aa11.38□□□□□ -0.59
DDX56-210ENST00000479440 SIGLEC15Q6ZMC9 328 aa11.38□□□□□ -0.59
DDX56-210ENST00000479440 OR1S2Q8NGQ3 325 aa11.38□□□□□ -0.59
DDX56-210ENST00000479440 YTHDF2Q9Y5A9 579 aaKnown RBP11.38□□□□□ -0.59
DDX56-210ENST00000479440 TMEM127O75204 238 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 ATG12O94817 140 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 IGKV3-20P01619 116 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 CLEC2LP0C7M8 214 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 NAT1P18440 290 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 HRH1P35367 487 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 ALDH3B2P48448 385 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 FXYD7P58549 80 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 GABARAPL2P60520 117 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 TSPAN5P62079 268 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 GSG1LQ6UXU4 331 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 SPATA12Q7Z6I5 190 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 ZNRF2Q8NHG8 242 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 FCGR1BQ92637 280 aa11.37□□□□□ -0.59
DDX56-210ENST00000479440 C7orf50Q9BRJ6 194 aaKnown RBP11.37□□□□□ -0.59
DDX56-210ENST00000479440 IGLC1P0CG04 106 aa11.36□□□□□ -0.59
DDX56-210ENST00000479440 NUP62P37198 522 aaPredicted RBP11.36□□□□□ -0.59
DDX56-210ENST00000479440 TAS2R20P59543 309 aa11.36□□□□□ -0.59
DDX56-210ENST00000479440 IZUMO4Q1ZYL8 232 aa11.36□□□□□ -0.59
DDX56-210ENST00000479440 CNBD2Q96M20 576 aa11.36□□□□□ -0.59
DDX56-210ENST00000479440 SAV1Q9H4B6 383 aaPredicted RBP11.36□□□□□ -0.59
DDX56-210ENST00000479440 IL4P05112 153 aa11.35□□□□□ -0.59
DDX56-210ENST00000479440 OR10J1P30954 320 aa11.35□□□□□ -0.59
DDX56-210ENST00000479440 YPEL3P61236 119 aaPredicted RBP11.35□□□□□ -0.59
DDX56-210ENST00000479440 USF2Q15853 346 aaPredicted RBP11.35□□□□□ -0.59
DDX56-210ENST00000479440 RRN3P1Q2M238 152 aa11.35□□□□□ -0.59
DDX56-210ENST00000479440 TMEM69Q5SWH9 247 aa11.35□□□□□ -0.59
DDX56-210ENST00000479440 GDF5OSQ5U4N7 250 aa11.35□□□□□ -0.59
DDX56-210ENST00000479440 FOXI2Q6ZQN5 318 aa11.35□□□□□ -0.59
DDX56-210ENST00000479440 ZNF709Q8N972 641 aa11.35□□□□□ -0.59
DDX56-210ENST00000479440 S100A16Q96FQ6 103 aaKnown RBP11.35□□□□□ -0.59
DDX56-210ENST00000479440 CLUHP3Q96NS8 147 aa11.35□□□□□ -0.59
DDX56-210ENST00000479440 SCPEP1Q9HB40 452 aa11.35□□□□□ -0.59
DDX56-210ENST00000479440 DNAH5Q8TE73 4624 aa11.35□□□□□ -0.59
DDX56-210ENST00000479440 IGKV1-5P01602 117 aa11.34□□□□□ -0.59
DDX56-210ENST00000479440 SLC25A4P12235 298 aa11.34□□□□□ -0.59
DDX56-210ENST00000479440 HLA-DMAP28067 261 aa11.34□□□□□ -0.59
DDX56-210ENST00000479440 UCP3P55916 312 aa11.34□□□□□ -0.59
DDX56-210ENST00000479440 DHODHQ02127 395 aa11.34□□□□□ -0.59
DDX56-210ENST00000479440 MLANAQ16655 118 aa11.34□□□□□ -0.59
DDX56-210ENST00000479440 BSXQ3C1V8 233 aa11.34□□□□□ -0.59
DDX56-210ENST00000479440 SPATA31B1PQ5VZV4 182 aa11.34□□□□□ -0.59
DDX56-210ENST00000479440 COQ8AQ8NI60 647 aa11.34□□□□□ -0.59
DDX56-210ENST00000479440 A0A0B4J293 547 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 EPM2AB3EWF7 344 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 BUB3O43684 328 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 P0C879 139 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 PRSS3P35030 304 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 ID1P41134 155 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 HSPA13P48723 471 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 RND2P52198 227 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 CCL18P55774 89 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 UBE2NLQ5JXB2 153 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 OR4B1Q8NGF8 309 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 NRG4Q8WWG1 115 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 LINC00052Q96N35 136 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 VCX3BQ9H321 246 aa11.33□□□□□ -0.6
DDX56-210ENST00000479440 LOC100506127A0A0U1RQW1 187 aa11.32□□□□□ -0.6
DDX56-210ENST00000479440 ETV6P41212 452 aa11.32□□□□□ -0.6
DDX56-210ENST00000479440 HTR2BP41595 481 aa11.32□□□□□ -0.6
DDX56-210ENST00000479440 PSMB3P49720 205 aa11.32□□□□□ -0.6
DDX56-210ENST00000479440 PSG9Q00887 426 aa11.32□□□□□ -0.6
DDX56-210ENST00000479440 SLC35B3Q9H1N7 401 aa11.32□□□□□ -0.6
DDX56-210ENST00000479440 PFDN2Q9UHV9 154 aa11.32□□□□□ -0.6
DDX56-210ENST00000479440 LYRM9A8MSI8 78 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 NUDT3O95989 172 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 TOMM40O96008 361 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 RORCP51449 518 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 RND3P61587 244 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 ZNF79Q15937 498 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 TTC32Q5I0X7 151 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 ETFRF1Q6IPR1 90 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 PRSS54Q6PEW0 395 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 SPARTQ8N0X7 666 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 C1orf158Q8N1D5 194 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 RNASE11Q8TAA1 199 aaKnown RBP11.31□□□□□ -0.6
DDX56-210ENST00000479440 RNASEH2CQ8TDP1 164 aaKnown RBP11.31□□□□□ -0.6
DDX56-210ENST00000479440 RRNAD1Q96FB5 475 aaKnown RBP11.31□□□□□ -0.6
DDX56-210ENST00000479440 ZNF486Q96H40 463 aaPredicted RBP11.31□□□□□ -0.6
DDX56-210ENST00000479440 TMEM208Q9BTX3 173 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 MAGT1Q9H0U3 335 aa11.31□□□□□ -0.6
DDX56-210ENST00000479440 DEFB1P60022 68 aa11.3□□□□□ -0.6
DDX56-210ENST00000479440 TRIM16LQ309B1 348 aa11.3□□□□□ -0.6
DDX56-210ENST00000479440 LYSMD2Q8IV50 215 aa11.3□□□□□ -0.6
DDX56-210ENST00000479440 CROCCP3Q8IVE0 287 aa11.3□□□□□ -0.6
DDX56-210ENST00000479440 RD3LP0DJH9 198 aa11.29□□□□□ -0.6
DDX56-210ENST00000479440 PGAM2P15259 253 aa11.29□□□□□ -0.6
DDX56-210ENST00000479440 RCVRNP35243 200 aa11.29□□□□□ -0.6
DDX56-210ENST00000479440 PAX9P55771 341 aa11.29□□□□□ -0.6
DDX56-210ENST00000479440 SPCS3P61009 180 aa11.29□□□□□ -0.6
DDX56-210ENST00000479440 SAMD13Q5VXD3 122 aa11.29□□□□□ -0.6
DDX56-210ENST00000479440 IZUMO2Q6UXV1 221 aa11.29□□□□□ -0.6
DDX56-210ENST00000479440 TP53RKQ96S44 253 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms