RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 DMXL2Q8TDJ6 3036 aa10.6□□□□□ -0.71
CCNL1-216ENST00000475298 SPTBN2O15020 2390 aa10.6□□□□□ -0.71
CCNL1-216ENST00000475298 BSNQ9UPA5 3926 aa10.6□□□□□ -0.71
CCNL1-216ENST00000475298 RNASEKQ6P5S7 137 aaKnown RBP10.6□□□□□ -0.71
CCNL1-216ENST00000475298 PQLC2Q6ZP29 291 aa10.6□□□□□ -0.71
CCNL1-216ENST00000475298 LINC00173Q6ZV60 143 aa10.6□□□□□ -0.71
CCNL1-216ENST00000475298 ITLN1Q8WWA0 313 aa10.6□□□□□ -0.71
CCNL1-216ENST00000475298 ADGRG4Q8IZF6 3080 aa10.6□□□□□ -0.71
CCNL1-216ENST00000475298 TET2Q6N021 2002 aaPredicted RBP10.59□□□□□ -0.71
CCNL1-216ENST00000475298 KALRNO60229 2985 aa10.59□□□□□ -0.71
CCNL1-216ENST00000475298 ADH4P08319 380 aa10.59□□□□□ -0.71
CCNL1-216ENST00000475298 OPRK1P41145 380 aa10.59□□□□□ -0.71
CCNL1-216ENST00000475298 REG1BP48304 166 aa10.59□□□□□ -0.71
CCNL1-216ENST00000475298 GNG4P50150 75 aa10.59□□□□□ -0.71
CCNL1-216ENST00000475298 HIST1H1AQ02539 215 aaPredicted RBP10.59□□□□□ -0.71
CCNL1-216ENST00000475298 TRAV3A0A0B4J244 114 aa10.59□□□□□ -0.71
CCNL1-216ENST00000475298 SH2D7A6NKC9 451 aaPredicted RBP10.59□□□□□ -0.71
CCNL1-216ENST00000475298 FOXH1O75593 365 aa10.59□□□□□ -0.71
CCNL1-216ENST00000475298 LOXL3P58215 753 aa10.59□□□□□ -0.71
CCNL1-216ENST00000475298 RPL8P62917 257 aaKnown RBP10.59□□□□□ -0.71
CCNL1-216ENST00000475298 SPATA31B1PQ5VZV4 182 aa10.59□□□□□ -0.71
CCNL1-216ENST00000475298 MIC13Q5XKP0 118 aa10.59□□□□□ -0.71
CCNL1-216ENST00000475298 FAM90A1Q86YD7 464 aa10.59□□□□□ -0.71
CCNL1-216ENST00000475298 OR2T6Q8NHC8 308 aa10.59□□□□□ -0.71
CCNL1-216ENST00000475298 MGST2Q99735 147 aa10.59□□□□□ -0.71
CCNL1-216ENST00000475298 PIEZO2Q9H5I5 2752 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 ROS1P08922 2347 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 IZUMO1RA6ND01 250 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 CA1P00915 261 aaPredicted RBP10.58□□□□□ -0.72
CCNL1-216ENST00000475298 SCGB1A1P11684 91 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 AZU1P20160 251 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 C2orf91Q6ZV80 131 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 SYS1-DBNDD2H3BUS1 97 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 ISLRO14498 428 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 MGST3O14880 152 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 TM4SF5O14894 197 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 IGLV2-8P01709 118 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 PRAMEF5Q5TYX0 476 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 GTF2H5Q6ZYL4 71 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 WIPF2Q8TF74 440 aaPredicted RBP10.58□□□□□ -0.72
CCNL1-216ENST00000475298 IFI27L2Q9H2X8 130 aa10.58□□□□□ -0.72
CCNL1-216ENST00000475298 HELTA6NFD8 242 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 C22orf46C9J442 243 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 K7EP34 96 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 GPR183P32249 361 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 MZT1Q08AG7 82 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 FAM27E3Q08E93 113 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 PSG3Q16557 428 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 TIMM23BQ5SRD1 257 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 PET117Q6UWS5 81 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 TREML4Q6UXN2 200 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 DEFB108BQ8NET1 73 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 FAM168AQ92567 244 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 GGTLC1Q9BX51 225 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 SAP30LQ9HAJ7 183 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 JPT1Q9UK76 154 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 RAI1Q7Z5J4 1906 aaPredicted RBP10.57□□□□□ -0.72
CCNL1-216ENST00000475298 AREGP15514 252 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 ASPHD1Q5U4P2 390 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 TRAT1Q6PIZ9 186 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 FAM169BQ8N8A8 192 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 ZNF331Q9NQX6 463 aaPredicted RBP10.57□□□□□ -0.72
CCNL1-216ENST00000475298 CALYQ9NYX4 217 aa10.57□□□□□ -0.72
CCNL1-216ENST00000475298 C9orf118A6NHY6 69 aa10.56□□□□□ -0.72
CCNL1-216ENST00000475298 GLRXP35754 106 aa10.56□□□□□ -0.72
CCNL1-216ENST00000475298 OR4A5Q8NH83 315 aa10.56□□□□□ -0.72
CCNL1-216ENST00000475298 C1orf159Q96HA4 380 aa10.56□□□□□ -0.72
CCNL1-216ENST00000475298 NPFFR1Q9GZQ6 430 aa10.56□□□□□ -0.72
CCNL1-216ENST00000475298 GTSF1LQ9H1H1 148 aa10.56□□□□□ -0.72
CCNL1-216ENST00000475298 DSCAML1Q8TD84 2053 aa10.56□□□□□ -0.72
CCNL1-216ENST00000475298 A0A1B0GV72 72 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 LHBP01229 141 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 C17orf58Q2M2W7 97 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 IBA57Q5T440 356 aaKnown RBP10.55□□□□□ -0.72
CCNL1-216ENST00000475298 RBMXL3Q8N7X1 1067 aaKnown RBP10.55□□□□□ -0.72
CCNL1-216ENST00000475298 OR4A16Q8NH70 328 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 ATP6V0BQ99437 205 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 PCNX1Q96RV3 2341 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 F2RL2O00254 374 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 MPDU1O75352 247 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 CFHR2P36980 270 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 EFNB3Q15768 340 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 Q6ZS92 163 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 ABHD12Q8N2K0 398 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 PPP1R35Q8TAP8 253 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 SNRNP40Q96DI7 357 aaKnown RBP10.55□□□□□ -0.72
CCNL1-216ENST00000475298 NAA38Q9BRA0 125 aaKnown RBP10.55□□□□□ -0.72
CCNL1-216ENST00000475298 MS4A5Q9H3V2 200 aa10.55□□□□□ -0.72
CCNL1-216ENST00000475298 OR2J3O76001 311 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 MT-CO2P00403 227 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 SEC11AP67812 179 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 SMAGPQ0VAQ4 97 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 PDLIM3Q53GG5 364 aaPredicted RBP10.54□□□□□ -0.72
CCNL1-216ENST00000475298 CT45A1Q5HYN5 189 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 RASL11AQ6T310 242 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 IGF2-ASQ6U949 168 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 IGFL3Q6UXB1 125 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 CT45A3Q8NHU0 189 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 S1PR3Q99500 378 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 MCRIP2Q9BUT9 160 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms