RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ZC2HC1AQ96GY0 325 aa3.26□□□□□ -1.89
USP16-205ENST00000474835 POLDIP2Q9Y2S7 368 aa3.26□□□□□ -1.89
USP16-205ENST00000474835 IGKV2D-26A0A0A0MRZ7 120 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 IGHV1-45A0A0A0MS14 117 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 RHODO00212 210 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 LIPFP07098 398 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 CCL2P13500 99 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 FCGR2BP31994 310 aaPredicted RBP3.25□□□□□ -1.89
USP16-205ENST00000474835 FXYD4P59646 89 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 Q6AWC8 147 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 PPP1R32Q7Z5V6 425 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 RPS19BP1Q86WX3 136 aaKnown RBP3.25□□□□□ -1.89
USP16-205ENST00000474835 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.25□□□□□ -1.89
USP16-205ENST00000474835 OR10AG1Q8NH19 301 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 SCGB1C1Q8TD33 95 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 RASL10AQ92737 203 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 MRPL16Q9NX20 251 aaKnown RBP3.25□□□□□ -1.89
USP16-205ENST00000474835 JKAMPQ9P055 326 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 WASHC3Q9Y3C0 194 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 CELSR1Q9NYQ6 3014 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 IGHV4-4A0A075B6R2 117 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 SH2D7A6NKC9 451 aaPredicted RBP3.25□□□□□ -1.89
USP16-205ENST00000474835 IGLL5B9A064 214 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 H3BP45 60 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 IAPPP10997 89 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 SLC25A16P16260 332 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 S100A7P31151 101 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 CLRN1P58418 232 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 HERV-K104P61576 105 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 RPL8P62917 257 aaKnown RBP3.25□□□□□ -1.89
USP16-205ENST00000474835 ODF1Q14990 250 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 SHISA2Q6UWI4 295 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 C8orf86Q6ZUL3 223 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 RPRMLQ8N4K4 120 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 SPTSSAQ969W0 71 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 SPRY4Q9C004 299 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 C19orf25Q9UFG5 118 aaPredicted RBP3.25□□□□□ -1.89
USP16-205ENST00000474835 RP1P56715 2156 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 A0A0J9YW62 118 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 CCDC85CA6NKD9 419 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 C12orf77C9JDV5 145 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.25□□□□□ -1.89
USP16-205ENST00000474835 M0R296 226 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 PRRG2O14669 202 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 SLC25A17O43808 307 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 PSPNO60542 156 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 IGLC6P0CF74 106 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 FAM106CPP0CH98 169 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 IL12BP29460 328 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 ZNF134P52741 427 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 XGP55808 180 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 KRTDAPP60985 99 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 MEF2CQ06413 473 aaPredicted RBP3.25□□□□□ -1.89
USP16-205ENST00000474835 LOXL1Q08397 574 aaPredicted RBP3.25□□□□□ -1.89
USP16-205ENST00000474835 LINC01559Q495D7 138 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 FAM106AQ4KMX7 169 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 LYSMD4Q5XG99 296 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 FAM53AQ6NSI3 398 aaPredicted RBP3.25□□□□□ -1.89
USP16-205ENST00000474835 MIR17HGQ75NE6 70 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 OOSP2Q86WS3 158 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 OR10W1Q8NGF6 305 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 UCN2Q96RP3 112 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 LINC01587Q99440 93 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 HRASLS2Q9NWW9 162 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 DEC1Q9P2X7 70 aa3.25□□□□□ -1.89
USP16-205ENST00000474835 ERRFI1Q9UJM3 462 aaPredicted RBP3.25□□□□□ -1.89
USP16-205ENST00000474835 A0A1B0GW15 77 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 IQCF6A8MYZ5 107 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 M0R1X1 148 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 IGLV2-23P01705 113 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 RNASE2P10153 161 aaKnown RBP3.24□□□□□ -1.89
USP16-205ENST00000474835 RPL13AP40429 203 aaKnown RBP3.24□□□□□ -1.89
USP16-205ENST00000474835 INSL3P51460 131 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 FXYD2P54710 66 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 ZNF90Q03938 601 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 EBI3Q14213 229 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 UTF1Q5T230 341 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 IL17RELQ6ZVW7 336 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 OR13H1Q8NG92 308 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 OR2K2Q8NGT1 345 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 HSD17B10Q99714 261 aaKnown RBP3.24□□□□□ -1.89
USP16-205ENST00000474835 RNF208Q9H0X6 261 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 WDR54Q9H977 334 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 TMEM167BQ9NRX6 74 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 SERTAD4Q9NUC0 356 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 TCF19Q9Y242 345 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 BRWD1Q9NSI6 2320 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 A0A1B0GV72 72 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 J3QT63 122 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 OR2H2O95918 312 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 GLI4P10075 376 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 PRCDQ00LT1 54 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 IBA57Q5T440 356 aaKnown RBP3.24□□□□□ -1.89
USP16-205ENST00000474835 ACP7Q6ZNF0 438 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 Q6ZUT4 128 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 ZCCHC24Q8N2G6 241 aaKnown RBP3.24□□□□□ -1.89
USP16-205ENST00000474835 RPP25Q9BUL9 199 aaKnown RBP3.24□□□□□ -1.89
USP16-205ENST00000474835 C1QTNF4Q9BXJ3 329 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 CENPMQ9NSP4 180 aa3.24□□□□□ -1.89
USP16-205ENST00000474835 C22orf24Q9Y442 160 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms