RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 IGHV7-81A0A0B4J1V7 117 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 OOSP1A8MZH6 123 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 C11orf94C9JXX5 98 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 FNDC10F2Z333 226 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 IFNA1P01562 189 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 OR5G3P0C626 314 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 FAM106CPP0CH98 169 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 PLA2G2AP14555 144 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 ORM2P19652 201 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 NPPCP23582 126 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 GCHFRP30047 84 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 ATP5IP56385 69 aaPredicted RBP4.92□□□□□ -1.62
CLK1-210ENST00000473565 EBI3Q14213 229 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 ECSCRQ19T08 205 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 ZNF114Q8NC26 417 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 OR4X1Q8NH49 305 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 ZNF503Q96F45 646 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 DERL1Q9BUN8 251 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 TNFRSF19Q9NS68 423 aa4.92□□□□□ -1.62
CLK1-210ENST00000473565 POLR3KQ9Y2Y1 108 aaPredicted RBP4.92□□□□□ -1.62
CLK1-210ENST00000473565 TCRBV4S1A1TA0A5B7 111 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 I3L2K1 104 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 K7EIM0 57 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 OR7C2O60412 319 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 CRYGCP07315 174 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 EGR2P11161 476 aaPredicted RBP4.91□□□□□ -1.62
CLK1-210ENST00000473565 TIGITQ495A1 244 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 LEMD1Q68G75 181 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 RBMS3Q6XE24 437 aaKnown RBP4.91□□□□□ -1.62
CLK1-210ENST00000473565 KCNIP2Q9NS61 270 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 FUT9Q9Y231 359 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 A0A096LNT2 108 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 PSMB11A5LHX3 300 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 PGPEP1LA6NFU8 196 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 G3V318 75 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 COX7A2P2O60397 106 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 PYYP10082 97 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 PRB4P10163 310 aaPredicted RBP4.91□□□□□ -1.62
CLK1-210ENST00000473565 BRS3P32247 399 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 PVRIGQ6DKI7 326 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 ZNF562Q6V9R5 426 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 MRPL41Q8IXM3 137 aaKnown RBP4.91□□□□□ -1.62
CLK1-210ENST00000473565 THAP8Q8NA92 274 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 OR1B1Q8NGR6 318 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 PIFOQ8TCI5 191 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 B4DSR2 109 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 H3BTX0 84 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 ATP6V0E1O15342 81 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 OR2J3O76001 311 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 CXorf1O96002 111 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 TGFAP01135 160 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 Q5PR19 223 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 BCL6BQ8N143 479 aaPredicted RBP4.91□□□□□ -1.62
CLK1-210ENST00000473565 RBM14Q96PK6 669 aaKnown RBP4.91□□□□□ -1.62
CLK1-210ENST00000473565 FANCD2OSQ96PS1 177 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 RASL11BQ9BPW5 248 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 SMIM7Q9BQ49 75 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 NIPSNAP3BQ9BS92 247 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 PARLQ9H300 379 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 SMDT1Q9H4I9 107 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 MANBALQ9NQG1 85 aa4.91□□□□□ -1.62
CLK1-210ENST00000473565 MTORP42345 2549 aa4.9□□□□□ -1.62
CLK1-210ENST00000473565 IGHV3-35A0A0C4DH35 117 aa4.9□□□□□ -1.62
CLK1-210ENST00000473565 SCO2A0A1W2PP80 73 aa4.9□□□□□ -1.62
CLK1-210ENST00000473565 NDUFB8O95169 186 aa4.9□□□□□ -1.62
CLK1-210ENST00000473565 ATF4P18848 351 aaPredicted RBP4.9□□□□□ -1.62
CLK1-210ENST00000473565 HNF1AP20823 631 aa4.9□□□□□ -1.62
CLK1-210ENST00000473565 TAGLN2P37802 199 aaKnown RBP4.9□□□□□ -1.62
CLK1-210ENST00000473565 C9orf152Q5JTZ5 239 aa4.9□□□□□ -1.62
CLK1-210ENST00000473565 OR5AU1Q8NGC0 362 aa4.9□□□□□ -1.62
CLK1-210ENST00000473565 SSX3Q99909 188 aa4.9□□□□□ -1.62
CLK1-210ENST00000473565 TMUB1Q9BVT8 246 aa4.9□□□□□ -1.62
CLK1-210ENST00000473565 DNAJC4Q9NNZ3 241 aa4.9□□□□□ -1.62
CLK1-210ENST00000473565 ZNF355PQ9NSJ1 428 aa4.9□□□□□ -1.62
CLK1-210ENST00000473565 IGHV3OR16-8A0A075B7F1 116 aa4.9□□□□□ -1.63
CLK1-210ENST00000473565 H3BUX3 64 aa4.9□□□□□ -1.63
CLK1-210ENST00000473565 NDUFB4O95168 129 aa4.9□□□□□ -1.63
CLK1-210ENST00000473565 IGLC1P0CG04 106 aa4.9□□□□□ -1.63
CLK1-210ENST00000473565 PSG1P11464 419 aa4.9□□□□□ -1.63
CLK1-210ENST00000473565 LYZP61626 148 aa4.9□□□□□ -1.63
CLK1-210ENST00000473565 DEFB113Q30KQ7 82 aa4.9□□□□□ -1.63
CLK1-210ENST00000473565 C10orf113Q5VZT2 155 aa4.9□□□□□ -1.63
CLK1-210ENST00000473565 ZNF343Q6P1L6 599 aa4.9□□□□□ -1.63
CLK1-210ENST00000473565 TMEM116Q8NCL8 245 aa4.9□□□□□ -1.63
CLK1-210ENST00000473565 FAM167A-AS1Q96KT0 104 aa4.9□□□□□ -1.63
CLK1-210ENST00000473565 SLC25A2Q9BXI2 301 aa4.9□□□□□ -1.63
CLK1-210ENST00000473565 URGCP-MRPS24S4R325 110 aa4.9□□□□□ -1.63
CLK1-210ENST00000473565 SETD2Q9BYW2 2564 aaPredicted RBP4.9□□□□□ -1.63
CLK1-210ENST00000473565 J3QKU1 62 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 IGKV1-17P01599 117 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 AMY1AP04745 511 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 PAX1P15863 534 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 SLC25A16P16260 332 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 ADIRFQ15847 76 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 ETFRF1Q6IPR1 90 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 UNQ5815/PRO19632Q6UWF5 114 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 LINC00305Q7Z4B0 112 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 TVP23CQ96ET8 276 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 MS4A10Q96PG2 267 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 TECRQ9NZ01 308 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms