RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 RBMX2Q9Y388 322 aaKnown RBP4.12□□□□□ -1.75
HDAC3-206ENST00000471968 IGHV3-38A0A0C4DH36 116 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 IRGMA1A4Y4 181 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 M0R2Z0 102 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 CCSO14618 274 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 CRXO43186 299 aaPredicted RBP4.11□□□□□ -1.75
HDAC3-206ENST00000471968 PITX3O75364 302 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 GABARAPO95166 117 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 HTR1AP08908 422 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 MYL12AP19105 171 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 CRYBB3P26998 211 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 PPP5CP53041 499 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 AP2S1P53680 142 aaPredicted RBP4.11□□□□□ -1.75
HDAC3-206ENST00000471968 WT1-ASQ06250 92 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 NEDD8Q15843 81 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 SPINK13Q1W4C9 94 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 CCDC58Q4VC31 144 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 EBLN2Q6P2I7 272 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 ZNF880Q6PDB4 577 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 BAP18Q8IXM2 172 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 SPARTQ8N0X7 666 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 DHRSXQ8N5I4 330 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 THAP8Q8NA92 274 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 CYGBQ8WWM9 190 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 MUL1Q969V5 352 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 FAAP24Q9BTP7 215 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 GABARAPL3Q9BY60 117 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 TAS2R4Q9NYW5 299 aa4.11□□□□□ -1.75
HDAC3-206ENST00000471968 F11RQ9Y624 299 aaKnown RBP4.11□□□□□ -1.75
HDAC3-206ENST00000471968 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 IGKV1-6A0A0C4DH72 117 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 RNF222A6NCQ9 220 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 J3QLW9 94 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 TAAR5O14804 337 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 BET1O15155 118 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 UPK1BO75841 260 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 ALPLP05186 524 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 ZNF19P17023 458 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 UCP1P25874 307 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 GBX2P52951 348 aaPredicted RBP4.1□□□□□ -1.75
HDAC3-206ENST00000471968 CLDN12P56749 244 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 TAS2R60P59551 318 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 DEFA1P59665 94 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 DEFA3P59666 94 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
HDAC3-206ENST00000471968 PRR3P79522 188 aaKnown RBP4.1□□□□□ -1.75
HDAC3-206ENST00000471968 MRPL28Q13084 256 aaKnown RBP4.1□□□□□ -1.75
HDAC3-206ENST00000471968 MRPL23Q16540 153 aaKnown RBP4.1□□□□□ -1.75
HDAC3-206ENST00000471968 SMN1Q16637 294 aaKnown RBP4.1□□□□□ -1.75
HDAC3-206ENST00000471968 ACSM3Q53FZ2 586 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 AADACL4Q5VUY2 407 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 C12orf73Q69YU5 71 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 XAF1Q6GPH4 301 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 TMPRSS11AQ6ZMR5 421 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 MOB1BQ7L9L4 216 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 ACBD7Q8N6N7 88 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 RNASE8Q8TDE3 154 aaKnown RBP4.1□□□□□ -1.75
HDAC3-206ENST00000471968 SLC29A1Q99808 456 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 COMMD5Q9GZQ3 224 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 NAA50Q9GZZ1 169 aaKnown RBP4.1□□□□□ -1.75
HDAC3-206ENST00000471968 HRASLSQ9HDD0 168 aa4.1□□□□□ -1.75
HDAC3-206ENST00000471968 RBM7Q9Y580 266 aaKnown RBP4.1□□□□□ -1.75
HDAC3-206ENST00000471968 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 TRAV12-2A0A075B6T6 113 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 LOC100130705A0A1B0GUX0 176 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 SLC16A6O15403 523 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 ZNF324O75467 553 aaPredicted RBP4.09□□□□□ -1.75
HDAC3-206ENST00000471968 CRTAPO75718 401 aaPredicted RBP4.09□□□□□ -1.75
HDAC3-206ENST00000471968 APOA1P02647 267 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 CD2P06729 351 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 GNAO1P09471 354 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 CD3GP09693 182 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 IFITM3Q01628 133 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 ZFP69Q49AA0 526 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 LINC01556Q5JQF7 62 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 SPATA31B1PQ5VZV4 182 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 FAM122CQ6P4D5 195 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 C16orf54Q6UWD8 224 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 GLIPR1L1Q6UWM5 242 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 AMTNQ6UX39 209 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 ZNF493Q6ZR52 646 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 KCTD9Q7L273 389 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 C6orf201Q7Z4U5 140 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 OR1B1Q8NGR6 318 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 OR6F1Q8NGZ6 308 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 OR52E5Q8NH55 327 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 RHOXF1Q8NHV9 184 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 COQ8AQ8NI60 647 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 C7orf33Q8WU49 177 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 TMEM263Q8WUH6 116 aaKnown RBP4.09□□□□□ -1.75
HDAC3-206ENST00000471968 PDCD1LG2Q9BQ51 273 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 FUNDC2Q9BWH2 189 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 QTRT1Q9BXR0 403 aaKnown RBP4.09□□□□□ -1.75
HDAC3-206ENST00000471968 CKLFQ9UBR5 152 aa4.09□□□□□ -1.75
HDAC3-206ENST00000471968 MRPS7Q9Y2R9 242 aaKnown RBP4.09□□□□□ -1.75
HDAC3-206ENST00000471968 TRGV2A0A075B6R0 118 aa4.08□□□□□ -1.76
HDAC3-206ENST00000471968 A0A0B4J293 547 aa4.08□□□□□ -1.76
HDAC3-206ENST00000471968 A0A0J9YX75 114 aa4.08□□□□□ -1.76
HDAC3-206ENST00000471968 OR4C45A6NMZ5 311 aa4.08□□□□□ -1.76
HDAC3-206ENST00000471968 CENPXA8MT69 81 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms