RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 FCAMRQ8WWV6 532 aa7□□□□□ -1.29
HDAC3-203ENST00000467533 IGF2BP2-AS1Q96M15 143 aa7□□□□□ -1.29
HDAC3-203ENST00000467533 RNF213Q63HN8 5207 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 TMEM235A6NFC5 223 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 F6UB75 175 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 SIVA1O15304 175 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 CIB2O75838 187 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 INSP01308 110 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 M6PRP20645 277 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 SNCAP37840 140 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 ID1P41134 155 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 OPRK1P41145 380 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 SPINK9Q5DT21 86 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 SPATA31B1PQ5VZV4 182 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 EBLN2Q6P2I7 272 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 OR4A16Q8NH70 328 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 ABHD1Q96SE0 405 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 MND1Q9BWT6 205 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 CCDC90BQ9GZT6 254 aa6.99□□□□□ -1.29
HDAC3-203ENST00000467533 MRPL36Q9P0J6 103 aaKnown RBP6.99□□□□□ -1.29
HDAC3-203ENST00000467533 PLAC8L1A1L4L8 177 aa6.98□□□□□ -1.29
HDAC3-203ENST00000467533 CORTO00230 105 aa6.98□□□□□ -1.29
HDAC3-203ENST00000467533 GSTZ1O43708 216 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-203ENST00000467533 TSPOP30536 169 aa6.98□□□□□ -1.29
HDAC3-203ENST00000467533 PSMB3P49720 205 aa6.98□□□□□ -1.29
HDAC3-203ENST00000467533 TMEM91Q6ZNR0 172 aa6.98□□□□□ -1.29
HDAC3-203ENST00000467533 UFD1Q92890 307 aa6.98□□□□□ -1.29
HDAC3-203ENST00000467533 DAPK2Q9UIK4 370 aa6.98□□□□□ -1.29
HDAC3-203ENST00000467533 SSX5O60225 188 aa6.97□□□□□ -1.29
HDAC3-203ENST00000467533 IGKV1-17P01599 117 aa6.97□□□□□ -1.29
HDAC3-203ENST00000467533 IL4P05112 153 aa6.97□□□□□ -1.29
HDAC3-203ENST00000467533 PAX9P55771 341 aa6.97□□□□□ -1.29
HDAC3-203ENST00000467533 HERV-K104P61576 105 aa6.97□□□□□ -1.29
HDAC3-203ENST00000467533 RPS25P62851 125 aaKnown RBP6.97□□□□□ -1.29
HDAC3-203ENST00000467533 BEST4Q8NFU0 473 aa6.97□□□□□ -1.29
HDAC3-203ENST00000467533 OR10J6PQ8NGY7 276 aa6.97□□□□□ -1.29
HDAC3-203ENST00000467533 OR4X1Q8NH49 305 aa6.97□□□□□ -1.29
HDAC3-203ENST00000467533 Q8WTZ3 238 aa6.97□□□□□ -1.29
HDAC3-203ENST00000467533 CYGBQ8WWM9 190 aa6.97□□□□□ -1.29
HDAC3-203ENST00000467533 BORCS5Q969J3 196 aa6.97□□□□□ -1.29
HDAC3-203ENST00000467533 WDR12Q9GZL7 423 aaKnown RBP6.97□□□□□ -1.29
HDAC3-203ENST00000467533 FAM30AQ9NZY2 134 aa6.97□□□□□ -1.29
HDAC3-203ENST00000467533 PSORS1C1Q9UIG5 152 aa6.97□□□□□ -1.29
HDAC3-203ENST00000467533 TRAV30A0A087WSZ9 112 aa6.96□□□□□ -1.3
HDAC3-203ENST00000467533 A0A0J9YX75 114 aa6.96□□□□□ -1.3
HDAC3-203ENST00000467533 NPIPB6E9PJ23 425 aa6.96□□□□□ -1.3
HDAC3-203ENST00000467533 ZNF701M0R085 212 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-203ENST00000467533 CASQ2O14958 399 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-203ENST00000467533 BUB3O43684 328 aa6.96□□□□□ -1.3
HDAC3-203ENST00000467533 AZU1P20160 251 aa6.96□□□□□ -1.3
HDAC3-203ENST00000467533 SUB1P53999 127 aaKnown RBP eCLIP6.96□□□□□ -1.3
HDAC3-203ENST00000467533 OR10A3P58181 314 aa6.96□□□□□ -1.3
HDAC3-203ENST00000467533 B2MP61769 119 aa6.96□□□□□ -1.3
HDAC3-203ENST00000467533 SPHARQ15513 63 aa6.96□□□□□ -1.3
HDAC3-203ENST00000467533 SPINK13Q1W4C9 94 aa6.96□□□□□ -1.3
HDAC3-203ENST00000467533 H2BFWTQ7Z2G1 175 aa6.96□□□□□ -1.3
HDAC3-203ENST00000467533 SLC35G3Q8N808 338 aa6.96□□□□□ -1.3
HDAC3-203ENST00000467533 FAT3Q8TDW7 4589 aa6.96□□□□□ -1.3
HDAC3-203ENST00000467533 IFITM5A6NNB3 132 aa6.95□□□□□ -1.3
HDAC3-203ENST00000467533 M0R2Z0 102 aa6.95□□□□□ -1.3
HDAC3-203ENST00000467533 PDCD5O14737 125 aa6.95□□□□□ -1.3
HDAC3-203ENST00000467533 PGLYRP1O75594 196 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-203ENST00000467533 NXPH4O95158 308 aa6.95□□□□□ -1.3
HDAC3-203ENST00000467533 HSPE1P61604 102 aaKnown RBP6.95□□□□□ -1.3
HDAC3-203ENST00000467533 DHODHQ02127 395 aa6.95□□□□□ -1.3
HDAC3-203ENST00000467533 TRAM1Q15629 374 aa6.95□□□□□ -1.3
HDAC3-203ENST00000467533 ZFP1Q6P2D0 407 aa6.95□□□□□ -1.3
HDAC3-203ENST00000467533 OR1S2Q8NGQ3 325 aa6.95□□□□□ -1.3
HDAC3-203ENST00000467533 OR6F1Q8NGZ6 308 aa6.95□□□□□ -1.3
HDAC3-203ENST00000467533 NTN5Q8WTR8 489 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-203ENST00000467533 GPR146Q96CH1 333 aa6.95□□□□□ -1.3
HDAC3-203ENST00000467533 C16orf74Q96GX8 76 aa6.95□□□□□ -1.3
HDAC3-203ENST00000467533 DOK5Q9P104 306 aa6.95□□□□□ -1.3
HDAC3-203ENST00000467533 TIMM8BQ9Y5J9 83 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-203ENST00000467533 H3BNG1 76 aa6.94□□□□□ -1.3
HDAC3-203ENST00000467533 ADAP1O75689 374 aa6.94□□□□□ -1.3
HDAC3-203ENST00000467533 FCER2P06734 321 aa6.94□□□□□ -1.3
HDAC3-203ENST00000467533 IGLC1P0CG04 106 aa6.94□□□□□ -1.3
HDAC3-203ENST00000467533 RNASE2P10153 161 aaKnown RBP6.94□□□□□ -1.3
HDAC3-203ENST00000467533 HTN1P15515 57 aa6.94□□□□□ -1.3
HDAC3-203ENST00000467533 HOXA5P20719 270 aa6.94□□□□□ -1.3
HDAC3-203ENST00000467533 MLANAQ16655 118 aa6.94□□□□□ -1.3
HDAC3-203ENST00000467533 SFXN4Q6P4A7 337 aa6.94□□□□□ -1.3
HDAC3-203ENST00000467533 AMTNQ6UX39 209 aa6.94□□□□□ -1.3
HDAC3-203ENST00000467533 BAP18Q8IXM2 172 aa6.94□□□□□ -1.3
HDAC3-203ENST00000467533 NOP10Q9NPE3 64 aaKnown RBP6.94□□□□□ -1.3
HDAC3-203ENST00000467533 RPRMQ9NS64 109 aa6.94□□□□□ -1.3
HDAC3-203ENST00000467533 KLK11Q9UBX7 282 aa6.94□□□□□ -1.3
HDAC3-203ENST00000467533 LSM2Q9Y333 95 aaKnown RBP6.94□□□□□ -1.3
HDAC3-203ENST00000467533 A0A096LPF7 62 aa6.93□□□□□ -1.3
HDAC3-203ENST00000467533 SOCS3O14543 225 aa6.93□□□□□ -1.3
HDAC3-203ENST00000467533 CRXO43186 299 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-203ENST00000467533 HSMCR30P0CW71 290 aa6.93□□□□□ -1.3
HDAC3-203ENST00000467533 PSMA1P25786 263 aaKnown RBP6.93□□□□□ -1.3
HDAC3-203ENST00000467533 OR10J1P30954 320 aa6.93□□□□□ -1.3
HDAC3-203ENST00000467533 NUP62P37198 522 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-203ENST00000467533 ASIPP42127 132 aa6.93□□□□□ -1.3
HDAC3-203ENST00000467533 YPEL3P61236 119 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-203ENST00000467533 FABP5Q01469 135 aa6.93□□□□□ -1.3
HDAC3-203ENST00000467533 CMTM1Q8IZ96 169 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms