RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 APOBEC3DQ96AK3 386 aaPredicted RBP2.78□□□□□ -1.96
SORT1-202ENST00000466471 SFRP2Q96HF1 295 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 REEP6Q96HR9 211 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 C17orf77Q96MU5 243 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 UHRF2Q96PU4 802 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 CIB3Q96Q77 187 aaPredicted RBP2.78□□□□□ -1.96
SORT1-202ENST00000466471 OR4C12Q96R67 309 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 VAMP8Q9BV40 100 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 TMEM147Q9BVK8 224 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 SF3B5Q9BWJ5 86 aaKnown RBP2.78□□□□□ -1.96
SORT1-202ENST00000466471 YAE1D1Q9NRH1 226 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 OCIAD1Q9NX40 245 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 BET1LQ9NYM9 111 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 PLEK2Q9NYT0 353 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 SMPXQ9UHP9 88 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 NXT1Q9UKK6 140 aaKnown RBP2.78□□□□□ -1.96
SORT1-202ENST00000466471 RFNGQ9Y644 331 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 CADP27708 2225 aa2.78□□□□□ -1.96
SORT1-202ENST00000466471 HERC1Q15751 4861 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 MPDZO75970 2070 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 TRAV9-2A0A087WT02 112 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 IGLV5-52A0A0A0MRZ9 124 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 IGKV1-6A0A0C4DH72 117 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 A0A0G2JRQ6 117 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 hCG_38984A0A1B0GV85 526 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 TMEM189A5PLL7 270 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 OR5B21A6NL26 309 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 VSTM2BA6NLU5 285 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 ZNF716A6NP11 495 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 CEBPZOSA8MTT3 80 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 H3BSH0 61 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 M0R135 149 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 RER1O15258 196 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 SLC31A1O15431 190 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 TCF21O43680 179 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 SSSCA1O60232 199 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 SS18L1O75177 396 aaPredicted RBP2.77□□□□□ -1.97
SORT1-202ENST00000466471 CDK2AP2O75956 126 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 OR2J3O76001 311 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 CST7O76096 145 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 S1PR2O95136 353 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 IGKV1-39P01597 117 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 IGKV1D-39P04432 117 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 LINC00869P0C866 280 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 STAG3L2P0CL84 134 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 STAG3L3P0CL85 134 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 SMIM17P0DL12 118 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 CRISP2P16562 243 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 COX5AP20674 150 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 ANOS1P23352 680 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 NPY1RP25929 384 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 GDF1P27539 372 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 S100GP29377 79 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 IL12BP29460 328 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 TSPOP30536 169 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 DUTP33316 252 aaKnown RBP2.77□□□□□ -1.97
SORT1-202ENST00000466471 TIMP3P35625 211 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 THBS3P49746 956 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 BIDP55957 195 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 CLDN18P56856 261 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 RBM11P57052 281 aaKnown RBP2.77□□□□□ -1.97
SORT1-202ENST00000466471 FGF12P61328 243 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 GNB1P62873 340 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 RUNX1Q01196 453 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 POU3F1Q03052 451 aaPredicted RBP2.77□□□□□ -1.97
SORT1-202ENST00000466471 TMEM267Q0VDI3 215 aaPredicted RBP2.77□□□□□ -1.97
SORT1-202ENST00000466471 ZNF154Q13106 437 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 ADIRFQ15847 76 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 ZNF585BQ52M93 769 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 PHLDA2Q53GA4 152 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 OCIAD2Q56VL3 154 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 FAM162BQ5T6X4 162 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 LCN15Q6UWW0 184 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 C12orf54Q6X4T0 127 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 ZNF818PQ6ZRF7 136 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 NIT1Q86X76 327 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 TMEM123Q8N131 208 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 ZNF321PQ8N8H1 164 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 ZNF114Q8NC26 417 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 NFAM1Q8NET5 270 aaPredicted RBP2.77□□□□□ -1.97
SORT1-202ENST00000466471 OR10G3Q8NGC4 313 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 OR11L1Q8NGX0 322 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 OR52E5Q8NH55 327 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 OR4S2Q8NH73 311 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 RDH5Q92781 318 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 TOMM40LQ969M1 308 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 SPTSSAQ969W0 71 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 SMIM12Q96EX1 92 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 ZNF799Q96GE5 643 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 COQ2Q96H96 371 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 CYYR1Q96J86 154 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 SPACA5Q96QH8 159 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 GPER1Q99527 375 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 HDHD3Q9BSH5 251 aaPredicted RBP2.77□□□□□ -1.97
SORT1-202ENST00000466471 VSIRQ9H7M9 311 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 ST20Q9HBF5 79 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 OSTCQ9NRP0 149 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 ZNF586Q9NXT0 402 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 C19orf25Q9UFG5 118 aaPredicted RBP2.77□□□□□ -1.97
SORT1-202ENST00000466471 OR2W1Q9Y3N9 320 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms