RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 CACNG8Q8WXS5 425 aa9.57□□□□□ -0.88
HDAC4-207ENST00000461113 RCHY1Q96PM5 261 aa9.57□□□□□ -0.88
HDAC4-207ENST00000461113 NDUFA4O00483 81 aa9.56□□□□□ -0.88
HDAC4-207ENST00000461113 CLN5O75503 358 aa9.56□□□□□ -0.88
HDAC4-207ENST00000461113 MBPP02686 304 aaPredicted RBP9.56□□□□□ -0.88
HDAC4-207ENST00000461113 FABP1P07148 127 aa9.56□□□□□ -0.88
HDAC4-207ENST00000461113 SLC16A13Q7RTY0 426 aa9.56□□□□□ -0.88
HDAC4-207ENST00000461113 OR1S2Q8NGQ3 325 aa9.56□□□□□ -0.88
HDAC4-207ENST00000461113 DYNLRB2Q8TF09 96 aa9.56□□□□□ -0.88
HDAC4-207ENST00000461113 ACY3Q96HD9 319 aa9.56□□□□□ -0.88
HDAC4-207ENST00000461113 PRR25Q96S07 402 aa9.56□□□□□ -0.88
HDAC4-207ENST00000461113 C20orf24Q9BUV8 137 aa9.56□□□□□ -0.88
HDAC4-207ENST00000461113 MED28Q9H204 178 aa9.56□□□□□ -0.88
HDAC4-207ENST00000461113 MGAT4CQ9UBM8 478 aa9.56□□□□□ -0.88
HDAC4-207ENST00000461113 ALG5Q9Y673 324 aa9.56□□□□□ -0.88
HDAC4-207ENST00000461113 HUWE1Q7Z6Z7 4374 aaKnown RBP9.56□□□□□ -0.88
HDAC4-207ENST00000461113 IGHV3-35A0A0C4DH35 117 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 C7orf66A4D0T2 115 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 C15orf62A8K5M9 175 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 H3BP45 60 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 TSC22D2O75157 780 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 TMEM50AO95807 157 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 PET100P0DJ07 73 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 BMI1P35226 326 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 RND2P52198 227 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 ELLP55199 621 aaPredicted RBP9.55□□□□□ -0.88
HDAC4-207ENST00000461113 ZNF600Q6ZNG1 722 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 OR10P1Q8NGE3 313 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 MARC2Q969Z3 335 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 GINS3Q9BRX5 216 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 NMES1Q9C002 83 aa9.55□□□□□ -0.88
HDAC4-207ENST00000461113 FNDC4Q9H6D8 234 aaPredicted RBP9.55□□□□□ -0.88
HDAC4-207ENST00000461113 RCL1Q9Y2P8 373 aaKnown RBP9.55□□□□□ -0.88
HDAC4-207ENST00000461113 RYR1P21817 5038 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 RBMY1BA6NDE4 496 aaKnown RBP9.54□□□□□ -0.88
HDAC4-207ENST00000461113 RBMY1EA6NEQ0 496 aaKnown RBP9.54□□□□□ -0.88
HDAC4-207ENST00000461113 ZFP92A6NM28 416 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 K7EPK0 472 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 SIX6O95475 246 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 CTSGP08311 255 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 RBMY1DP0C7P1 496 aaKnown RBP9.54□□□□□ -0.88
HDAC4-207ENST00000461113 OR10J1P30954 320 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 CAV2P51636 162 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 MLANAQ16655 118 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 PRSS54Q6PEW0 395 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 TMEM116Q8NCL8 245 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 Q8WTZ3 238 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 NPIPB3Q92617 1050 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 NARS2Q96I59 477 aaKnown RBP9.54□□□□□ -0.88
HDAC4-207ENST00000461113 CHRDL1Q9BU40 450 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 ZNF436Q9C0F3 470 aaPredicted RBP9.54□□□□□ -0.88
HDAC4-207ENST00000461113 SIGLEC8Q9NYZ4 499 aa9.54□□□□□ -0.88
HDAC4-207ENST00000461113 SMCO3A2RU48 225 aa9.53□□□□□ -0.88
HDAC4-207ENST00000461113 AKR1C1Q04828 323 aa9.53□□□□□ -0.88
HDAC4-207ENST00000461113 RAB32Q13637 225 aa9.53□□□□□ -0.88
HDAC4-207ENST00000461113 OXA1LQ15070 435 aa9.53□□□□□ -0.88
HDAC4-207ENST00000461113 OR8G2PQ6IF36 304 aa9.53□□□□□ -0.88
HDAC4-207ENST00000461113 STX12Q86Y82 276 aa9.53□□□□□ -0.88
HDAC4-207ENST00000461113 TMEM190Q8WZ59 177 aa9.53□□□□□ -0.88
HDAC4-207ENST00000461113 DAZ1Q9NQZ3 744 aaKnown RBP9.53□□□□□ -0.88
HDAC4-207ENST00000461113 TECRQ9NZ01 308 aaKnown RBP9.53□□□□□ -0.88
HDAC4-207ENST00000461113 MRPL27Q9P0M9 148 aaKnown RBP9.53□□□□□ -0.88
HDAC4-207ENST00000461113 PFDN2Q9UHV9 154 aa9.53□□□□□ -0.88
HDAC4-207ENST00000461113 C2orf70A6NJV1 201 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 E5RGE8 158 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 F8W735 103 aaPredicted RBP9.52□□□□□ -0.89
HDAC4-207ENST00000461113 K7EMT4 169 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 METTL15P1P0C7V9 234 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 FOLR2P14207 255 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 ADMP35318 185 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 YPEL3P61236 119 aaPredicted RBP9.52□□□□□ -0.89
HDAC4-207ENST00000461113 HBG1P69891 147 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 HBG2P69892 147 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 LRRC37A5PQ49AS3 106 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 LCN12Q6JVE5 192 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 OR2K2Q8NGT1 345 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 TMEM170AQ8WVE7 144 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 SLC25A31Q9H0C2 315 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 TMEM231Q9H6L2 316 aa9.52□□□□□ -0.89
HDAC4-207ENST00000461113 TRAV14DV4A0A0A6YYC5 116 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 A8MWP6 167 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 DEDDO75618 318 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 CSN3P07498 182 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 RD3LP0DJH9 198 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 CBLN1P23435 193 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 S100A7P31151 101 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 GAMTQ14353 236 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 TIGITQ495A1 244 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 TM4SF20Q53R12 229 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 LAMTOR1Q6IAA8 161 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 TMEM14EPQ6UXP3 125 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 SBSPONQ8IVN8 264 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 ASB13Q8WXK3 278 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 METTL26Q96S19 204 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 GGACTQ9BVM4 153 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
HDAC4-207ENST00000461113 PUS1Q9Y606 427 aaKnown RBP eCLIP9.51□□□□□ -0.89
HDAC4-207ENST00000461113 A0A1W2PS18 150 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 CFDP00746 253 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms