RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 KRTAP17-1Q9BYP8 105 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 NXF2Q9GZY0 626 aaKnown RBP3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 NAA50Q9GZZ1 169 aaKnown RBP3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 TMPRSS5Q9H3S3 457 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 MRPL36Q9P0J6 103 aaKnown RBP3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 KLK11Q9UBX7 282 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 FBXL17Q9UF56 701 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 TP53TG1Q9Y2A0 90 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 BIRC6Q9NR09 4857 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 A0A087WXM4 84 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 A0A0G2JRQ6 117 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 A0A1B0GU03 582 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 MPTX1A8MV57 137 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 FAM25AB3EWG3 89 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 FAM25CB3EWG5 89 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 FAM25GB3EWG6 89 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 DNASE2O00115 360 aaPredicted RBP3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 IFNA17P01571 189 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 IGKV1-5P01602 117 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 FGF2P09038 288 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 S100GP29377 79 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 PIGPP57054 158 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 PRCDQ00LT1 54 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 RELQ04864 619 aaPredicted RBP3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 KRTAP15-1Q3LI76 137 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 GSG1LQ6UXU4 331 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 CADM3Q8N126 398 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 DUSP18Q8NEJ0 188 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 OR52I2Q8NH67 350 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 C11orf45Q8TAV5 145 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 CMTM3Q96MX0 182 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 ABHD1Q96SE0 405 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 TSC22D3Q99576 134 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 TXN2Q99757 166 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 MS4A6AQ9H2W1 248 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 FNDC4Q9H6D8 234 aaPredicted RBP3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 RABAC1Q9UI14 185 aa3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 KLK5Q9Y337 293 aaPredicted RBP3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 PUS1Q9Y606 427 aaKnown RBP eCLIP3.42□□□□□ -1.86
GTF3C3-208ENST00000455546 KMT2AQ03164 3969 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 MUC4Q99102 2169 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 C3orf85A0A1B0GTC6 90 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 KNCNA6PVL3 124 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 PRSS47A8MTI9 375 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 RHODO00212 210 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 CA1P00915 261 aaPredicted RBP3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 APOA1P02647 267 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 CD3DP04234 171 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 GIG44P09565 113 aaPredicted RBP3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 RNASE2P10153 161 aaKnown RBP3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 NPPCP23582 126 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 RCVRNP35243 200 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 SNCAP37840 140 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 RORCP51449 518 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 AKR1C2P52895 323 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 CMC4P56277 68 aaPredicted RBP3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 PAFAH1B2P68402 229 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 TMEM187Q14656 261 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 RBMS2Q15434 407 aaKnown RBP3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 BAK1Q16611 211 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 TRIM16LQ309B1 348 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 TIGITQ495A1 244 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 FAAP20Q6NZ36 180 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 SLC35G3Q8N808 338 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 ZNF114Q8NC26 417 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 STXBP6Q8NFX7 210 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 MARCH1Q8TCQ1 289 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 TMEM230Q96A57 120 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 ATP6V0BQ99437 205 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 C6orf62Q9GZU0 229 aaPredicted RBP3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 VSIRQ9H7M9 311 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 SCPEP1Q9HB40 452 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 FAM212BQ9NTI7 297 aaPredicted RBP3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 CLEC5AQ9NY25 188 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 EXTL2Q9UBQ6 330 aa3.41□□□□□ -1.86
GTF3C3-208ENST00000455546 KRTAP4-8A0A0G2JLE6 195 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 IGLL5B9A064 214 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 CTDSP2O14595 271 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 CLN5O75503 358 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 TNFAIP8O95379 198 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 IGKV1-17P01599 117 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 IFNA4P05014 189 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 OR5AC1P0C628 307 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 ZNF688P0C7X2 276 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 P0C879 139 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 RBMY1A1P0DJD3 496 aaKnown RBP3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 RBMY1CP0DJD4 496 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 OPRK1P41145 380 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 NPBWR1P48145 328 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 HOXA1P49639 335 aaPredicted RBP3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 SUB1P53999 127 aaKnown RBP eCLIP3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 RND3P61587 244 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 MEF2DQ14814 521 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 RBMY1FQ15415 496 aaKnown RBP3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 CTF1Q16619 201 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 SCGB2B2Q4G0G5 96 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 RNASE10Q5GAN6 216 aaKnown RBP3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 ACTL10Q5JWF8 245 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 GPR107Q5VW38 600 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 LGALS9CQ6DKI2 356 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms