RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 YPEL3P61236 119 aaPredicted RBP13.34□□□□□ -0.27
MSH6-206ENST00000455383 FAM210BQ96KR6 192 aa13.34□□□□□ -0.27
MSH6-206ENST00000455383 ENY2Q9NPA8 101 aa13.34□□□□□ -0.27
MSH6-206ENST00000455383 C3orf85A0A1B0GTC6 90 aa13.33□□□□□ -0.28
MSH6-206ENST00000455383 RPS10-NUDT3A0A1W2PQS6 291 aa13.33□□□□□ -0.28
MSH6-206ENST00000455383 ZNF705FA8MVS1 300 aaPredicted RBP13.33□□□□□ -0.28
MSH6-206ENST00000455383 M0QYG6 137 aa13.33□□□□□ -0.28
MSH6-206ENST00000455383 ZNF705DP0CH99 300 aaPredicted RBP13.33□□□□□ -0.28
MSH6-206ENST00000455383 ZNF705BP0CI00 300 aaPredicted RBP13.33□□□□□ -0.28
MSH6-206ENST00000455383 HLA-DRB4P13762 266 aa13.33□□□□□ -0.28
MSH6-206ENST00000455383 SNRPD3P62318 126 aaKnown RBP13.33□□□□□ -0.28
MSH6-206ENST00000455383 PRSS54Q6PEW0 395 aa13.33□□□□□ -0.28
MSH6-206ENST00000455383 Q6ZRM9 215 aa13.33□□□□□ -0.28
MSH6-206ENST00000455383 SNX29P2Q8IUI4 249 aa13.33□□□□□ -0.28
MSH6-206ENST00000455383 Q8WTZ3 238 aa13.33□□□□□ -0.28
MSH6-206ENST00000455383 YIPF6Q96EC8 236 aa13.33□□□□□ -0.28
MSH6-206ENST00000455383 NRN1Q9NPD7 142 aa13.33□□□□□ -0.28
MSH6-206ENST00000455383 HLA-DRB4X5D2U9 266 aa13.33□□□□□ -0.28
MSH6-206ENST00000455383 SMIM31A0A1B0GVY4 71 aa13.32□□□□□ -0.28
MSH6-206ENST00000455383 SMIM9A6NGZ8 99 aa13.32□□□□□ -0.28
MSH6-206ENST00000455383 IFNA10P01566 189 aa13.32□□□□□ -0.28
MSH6-206ENST00000455383 SPART-AS1P0CW21 52 aa13.32□□□□□ -0.28
MSH6-206ENST00000455383 PGAM2P15259 253 aa13.32□□□□□ -0.28
MSH6-206ENST00000455383 UCP1P25874 307 aa13.32□□□□□ -0.28
MSH6-206ENST00000455383 HTR2BP41595 481 aa13.32□□□□□ -0.28
MSH6-206ENST00000455383 SPCS3P61009 180 aa13.32□□□□□ -0.28
MSH6-206ENST00000455383 DHODHQ02127 395 aa13.32□□□□□ -0.28
MSH6-206ENST00000455383 USF2Q15853 346 aaPredicted RBP13.32□□□□□ -0.28
MSH6-206ENST00000455383 OR52E5Q8NH55 327 aa13.32□□□□□ -0.28
MSH6-206ENST00000455383 TMEM189A5PLL7 270 aa13.31□□□□□ -0.28
MSH6-206ENST00000455383 BUB3O43684 328 aa13.31□□□□□ -0.28
MSH6-206ENST00000455383 SLC25A4P12235 298 aa13.31□□□□□ -0.28
MSH6-206ENST00000455383 RND2P52198 227 aa13.31□□□□□ -0.28
MSH6-206ENST00000455383 SP6Q3SY56 376 aa13.31□□□□□ -0.28
MSH6-206ENST00000455383 ARRDC1Q8N5I2 433 aa13.31□□□□□ -0.28
MSH6-206ENST00000455383 COMMD3Q9UBI1 195 aa13.31□□□□□ -0.28
MSH6-206ENST00000455383 IGLV2-18A0A075B6J9 118 aa13.3□□□□□ -0.28
MSH6-206ENST00000455383 ATP6V1G2O95670 118 aa13.3□□□□□ -0.28
MSH6-206ENST00000455383 OR10J1P30954 320 aa13.3□□□□□ -0.28
MSH6-206ENST00000455383 NKX2-1P43699 371 aaPredicted RBP13.3□□□□□ -0.28
MSH6-206ENST00000455383 LSM3P62310 102 aaKnown RBP13.3□□□□□ -0.28
MSH6-206ENST00000455383 TRIM16LQ309B1 348 aa13.3□□□□□ -0.28
MSH6-206ENST00000455383 C2orf83Q53S99 150 aa13.3□□□□□ -0.28
MSH6-206ENST00000455383 ZNF575Q86XF7 245 aa13.3□□□□□ -0.28
MSH6-206ENST00000455383 RNASEH2CQ8TDP1 164 aaKnown RBP13.3□□□□□ -0.28
MSH6-206ENST00000455383 RRNAD1Q96FB5 475 aaKnown RBP13.3□□□□□ -0.28
MSH6-206ENST00000455383 DKK2Q9UBU2 259 aa13.3□□□□□ -0.28
MSH6-206ENST00000455383 B3GALNT1O75752 331 aa13.29□□□□□ -0.28
MSH6-206ENST00000455383 NXPH3O95157 252 aa13.29□□□□□ -0.28
MSH6-206ENST00000455383 IFNA21P01568 189 aa13.29□□□□□ -0.28
MSH6-206ENST00000455383 ELK1P19419 428 aa13.29□□□□□ -0.28
MSH6-206ENST00000455383 RNF212Q495C1 297 aa13.29□□□□□ -0.28
MSH6-206ENST00000455383 GDF5OSQ5U4N7 250 aa13.29□□□□□ -0.28
MSH6-206ENST00000455383 SIGLEC15Q6ZMC9 328 aa13.29□□□□□ -0.28
MSH6-206ENST00000455383 FAM219AQ8IW50 185 aa13.29□□□□□ -0.28
MSH6-206ENST00000455383 TMEM170AQ8WVE7 144 aa13.29□□□□□ -0.28
MSH6-206ENST00000455383 CLUHP3Q96NS8 147 aa13.29□□□□□ -0.28
MSH6-206ENST00000455383 TOMM40O96008 361 aa13.28□□□□□ -0.28
MSH6-206ENST00000455383 IL4P05112 153 aa13.28□□□□□ -0.28
MSH6-206ENST00000455383 OXA1LQ15070 435 aa13.28□□□□□ -0.28
MSH6-206ENST00000455383 RNASE10Q5GAN6 216 aaKnown RBP13.28□□□□□ -0.28
MSH6-206ENST00000455383 UBE2DNLQ8IWF7 75 aa13.28□□□□□ -0.28
MSH6-206ENST00000455383 CCDC71LQ8N9Z2 235 aa13.28□□□□□ -0.28
MSH6-206ENST00000455383 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.28□□□□□ -0.28
MSH6-206ENST00000455383 COPZ2Q9P299 210 aa13.28□□□□□ -0.28
MSH6-206ENST00000455383 KLK11Q9UBX7 282 aa13.28□□□□□ -0.28
MSH6-206ENST00000455383 RFNGQ9Y644 331 aa13.28□□□□□ -0.28
MSH6-206ENST00000455383 TEX48A0A1B0GUV7 120 aa13.27□□□□□ -0.29
MSH6-206ENST00000455383 GSTZ1O43708 216 aaPredicted RBP13.27□□□□□ -0.29
MSH6-206ENST00000455383 CDS2O95674 445 aa13.27□□□□□ -0.29
MSH6-206ENST00000455383 CD3DP04234 171 aa13.27□□□□□ -0.29
MSH6-206ENST00000455383 TBPP20226 339 aa13.27□□□□□ -0.29
MSH6-206ENST00000455383 EMP1P54849 157 aa13.27□□□□□ -0.29
MSH6-206ENST00000455383 SOHLH1Q5JUK2 328 aa13.27□□□□□ -0.29
MSH6-206ENST00000455383 SLC24A4Q8NFF2 622 aa13.27□□□□□ -0.29
MSH6-206ENST00000455383 ZFAND1Q8TCF1 268 aa13.27□□□□□ -0.29
MSH6-206ENST00000455383 HPGDSO60760 199 aa13.26□□□□□ -0.29
MSH6-206ENST00000455383 RD3LP0DJH9 198 aa13.26□□□□□ -0.29
MSH6-206ENST00000455383 FAM222AQ5U5X8 452 aa13.26□□□□□ -0.29
MSH6-206ENST00000455383 ZNF709Q8N972 641 aa13.26□□□□□ -0.29
MSH6-206ENST00000455383 OR13C8Q8NGS7 320 aa13.26□□□□□ -0.29
MSH6-206ENST00000455383 TERB2Q8NHR7 220 aa13.26□□□□□ -0.29
MSH6-206ENST00000455383 RNASE11Q8TAA1 199 aaKnown RBP13.26□□□□□ -0.29
MSH6-206ENST00000455383 LHFPL5Q8TAF8 219 aa13.26□□□□□ -0.29
MSH6-206ENST00000455383 NPIPB3Q92617 1050 aa13.26□□□□□ -0.29
MSH6-206ENST00000455383 NIPSNAP3BQ9BS92 247 aa13.26□□□□□ -0.29
MSH6-206ENST00000455383 TMEM222Q9H0R3 208 aa13.26□□□□□ -0.29
MSH6-206ENST00000455383 SAV1Q9H4B6 383 aaPredicted RBP13.26□□□□□ -0.29
MSH6-206ENST00000455383 HEYLQ9NQ87 328 aaPredicted RBP13.26□□□□□ -0.29
MSH6-206ENST00000455383 APOBP04114 4563 aaKnown RBP13.26□□□□□ -0.29
MSH6-206ENST00000455383 DEFB1P60022 68 aa13.25□□□□□ -0.29
MSH6-206ENST00000455383 ETFRF1Q6IPR1 90 aa13.25□□□□□ -0.29
MSH6-206ENST00000455383 FOXI2Q6ZQN5 318 aa13.25□□□□□ -0.29
MSH6-206ENST00000455383 OR4D10Q8NGI6 311 aa13.25□□□□□ -0.29
MSH6-206ENST00000455383 OR52I2Q8NH67 350 aa13.25□□□□□ -0.29
MSH6-206ENST00000455383 GLYATL2Q8WU03 294 aa13.25□□□□□ -0.29
MSH6-206ENST00000455383 PLA2G2EQ9NZK7 142 aa13.25□□□□□ -0.29
MSH6-206ENST00000455383 MTFP1Q9UDX5 166 aa13.25□□□□□ -0.29
MSH6-206ENST00000455383 NACAE9PAV3 2078 aa13.25□□□□□ -0.29
MSH6-206ENST00000455383 PSG1P11464 419 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms