RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 LOC100506127A0A0U1RQW1 187 aa10.2□□□□□ -0.78
LYSMD3-202ENST00000453259 FAM90A26D6RGX4 464 aa10.2□□□□□ -0.78
LYSMD3-202ENST00000453259 B3GALNT1O75752 331 aa10.2□□□□□ -0.78
LYSMD3-202ENST00000453259 P0C879 139 aa10.2□□□□□ -0.78
LYSMD3-202ENST00000453259 SLC25A4P12235 298 aa10.2□□□□□ -0.78
LYSMD3-202ENST00000453259 NKX2-1P43699 371 aaPredicted RBP10.2□□□□□ -0.78
LYSMD3-202ENST00000453259 AKR1C2P52895 323 aa10.2□□□□□ -0.78
LYSMD3-202ENST00000453259 PPP5CP53041 499 aa10.2□□□□□ -0.78
LYSMD3-202ENST00000453259 ZNF767PQ75MW2 155 aa10.2□□□□□ -0.78
LYSMD3-202ENST00000453259 ZNF575Q86XF7 245 aa10.2□□□□□ -0.78
LYSMD3-202ENST00000453259 FNDC4Q9H6D8 234 aaPredicted RBP10.2□□□□□ -0.78
LYSMD3-202ENST00000453259 A0A0B4J293 547 aa10.19□□□□□ -0.78
LYSMD3-202ENST00000453259 HLA-DMAP28067 261 aa10.19□□□□□ -0.78
LYSMD3-202ENST00000453259 HTR2BP41595 481 aa10.19□□□□□ -0.78
LYSMD3-202ENST00000453259 SPATA31B1PQ5VZV4 182 aa10.19□□□□□ -0.78
LYSMD3-202ENST00000453259 C15orf53Q8NAA6 179 aa10.19□□□□□ -0.78
LYSMD3-202ENST00000453259 GPX8Q8TED1 209 aa10.19□□□□□ -0.78
LYSMD3-202ENST00000453259 NIPSNAP3BQ9BS92 247 aa10.19□□□□□ -0.78
LYSMD3-202ENST00000453259 KRTAP4-5Q9BYR2 181 aa10.19□□□□□ -0.78
LYSMD3-202ENST00000453259 DKK2Q9UBU2 259 aa10.19□□□□□ -0.78
LYSMD3-202ENST00000453259 CACFD1Q9UGQ2 172 aa10.19□□□□□ -0.78
LYSMD3-202ENST00000453259 PFDN2Q9UHV9 154 aa10.19□□□□□ -0.78
LYSMD3-202ENST00000453259 IGLV2-18A0A075B6J9 118 aa10.18□□□□□ -0.78
LYSMD3-202ENST00000453259 IGKV1-5P01602 117 aa10.18□□□□□ -0.78
LYSMD3-202ENST00000453259 IGLC1P0CG04 106 aa10.18□□□□□ -0.78
LYSMD3-202ENST00000453259 RCVRNP35243 200 aa10.18□□□□□ -0.78
LYSMD3-202ENST00000453259 ALDH3B2P48448 385 aa10.18□□□□□ -0.78
LYSMD3-202ENST00000453259 AARDQ4LEZ3 155 aa10.18□□□□□ -0.78
LYSMD3-202ENST00000453259 SAMD12Q8N8I0 201 aa10.18□□□□□ -0.78
LYSMD3-202ENST00000453259 OR52E5Q8NH55 327 aa10.18□□□□□ -0.78
LYSMD3-202ENST00000453259 RNASEH2CQ8TDP1 164 aaKnown RBP10.18□□□□□ -0.78
LYSMD3-202ENST00000453259 SCRT1Q9BWW7 348 aa10.18□□□□□ -0.78
LYSMD3-202ENST00000453259 BUB3O43684 328 aa10.17□□□□□ -0.78
LYSMD3-202ENST00000453259 TIGITQ495A1 244 aa10.17□□□□□ -0.78
LYSMD3-202ENST00000453259 SPINK9Q5DT21 86 aa10.17□□□□□ -0.78
LYSMD3-202ENST00000453259 SAMD13Q5VXD3 122 aa10.17□□□□□ -0.78
LYSMD3-202ENST00000453259 ETFRF1Q6IPR1 90 aa10.17□□□□□ -0.78
LYSMD3-202ENST00000453259 SIGLEC15Q6ZMC9 328 aa10.17□□□□□ -0.78
LYSMD3-202ENST00000453259 FAM219AQ8IW50 185 aa10.17□□□□□ -0.78
LYSMD3-202ENST00000453259 RRNAD1Q96FB5 475 aaKnown RBP10.17□□□□□ -0.78
LYSMD3-202ENST00000453259 Q9H521 79 aa10.17□□□□□ -0.78
LYSMD3-202ENST00000453259 MRPL36Q9P0J6 103 aaKnown RBP10.17□□□□□ -0.78
LYSMD3-202ENST00000453259 SMIM31A0A1B0GVY4 71 aa10.16□□□□□ -0.78
LYSMD3-202ENST00000453259 C16orf90A8MZG2 172 aa10.16□□□□□ -0.78
LYSMD3-202ENST00000453259 OR10J1P30954 320 aa10.16□□□□□ -0.78
LYSMD3-202ENST00000453259 ETV6P41212 452 aa10.16□□□□□ -0.78
LYSMD3-202ENST00000453259 SPCS3P61009 180 aa10.16□□□□□ -0.78
LYSMD3-202ENST00000453259 FOXI2Q6ZQN5 318 aa10.16□□□□□ -0.78
LYSMD3-202ENST00000453259 NOXA1Q86UR1 476 aa10.16□□□□□ -0.78
LYSMD3-202ENST00000453259 ARRDC1Q8N5I2 433 aa10.16□□□□□ -0.78
LYSMD3-202ENST00000453259 GOLT1BQ9Y3E0 138 aa10.16□□□□□ -0.78
LYSMD3-202ENST00000453259 TMED3Q9Y3Q3 217 aa10.16□□□□□ -0.78
LYSMD3-202ENST00000453259 HSPG2P98160 4391 aa10.15□□□□□ -0.78
LYSMD3-202ENST00000453259 IL4P05112 153 aa10.15□□□□□ -0.78
LYSMD3-202ENST00000453259 TBPP20226 339 aa10.15□□□□□ -0.78
LYSMD3-202ENST00000453259 PIGPP57054 158 aa10.15□□□□□ -0.78
LYSMD3-202ENST00000453259 IZUMO4Q1ZYL8 232 aa10.15□□□□□ -0.78
LYSMD3-202ENST00000453259 C2orf83Q53S99 150 aa10.15□□□□□ -0.78
LYSMD3-202ENST00000453259 FAM222AQ5U5X8 452 aa10.15□□□□□ -0.78
LYSMD3-202ENST00000453259 PRSS54Q6PEW0 395 aa10.15□□□□□ -0.78
LYSMD3-202ENST00000453259 MAPKAPK5-AS1Q8N8E1 139 aa10.15□□□□□ -0.78
LYSMD3-202ENST00000453259 SAV1Q9H4B6 383 aaPredicted RBP10.15□□□□□ -0.78
LYSMD3-202ENST00000453259 C3orf85A0A1B0GTC6 90 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 TOMM40O96008 361 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 HBE1P02100 147 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 APOA1P02647 267 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 PGAM2P15259 253 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 ID1P41134 155 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 PSMB3P49720 205 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 RND2P52198 227 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 EMP1P54849 157 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 DHODHQ02127 395 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 USF2Q15853 346 aaPredicted RBP10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 OR8G2PQ6IF36 304 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 CCDC71LQ8N9Z2 235 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 SLC24A4Q8NFF2 622 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 TP53RKQ96S44 253 aa10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.14□□□□□ -0.79
LYSMD3-202ENST00000453259 RD3LP0DJH9 198 aa10.13□□□□□ -0.79
LYSMD3-202ENST00000453259 UCP1P25874 307 aa10.13□□□□□ -0.79
LYSMD3-202ENST00000453259 TRIM16LQ309B1 348 aa10.13□□□□□ -0.79
LYSMD3-202ENST00000453259 C1orf194Q5T5A4 169 aa10.13□□□□□ -0.79
LYSMD3-202ENST00000453259 LHFPL1Q86WI0 220 aa10.13□□□□□ -0.79
LYSMD3-202ENST00000453259 Q8N1X5 172 aa10.13□□□□□ -0.79
LYSMD3-202ENST00000453259 RNASE11Q8TAA1 199 aaKnown RBP10.13□□□□□ -0.79
LYSMD3-202ENST00000453259 ZFAND1Q8TCF1 268 aa10.13□□□□□ -0.79
LYSMD3-202ENST00000453259 HEYLQ9NQ87 328 aaPredicted RBP10.13□□□□□ -0.79
LYSMD3-202ENST00000453259 PAX9P55771 341 aa10.12□□□□□ -0.79
LYSMD3-202ENST00000453259 DAD1P61803 113 aa10.12□□□□□ -0.79
LYSMD3-202ENST00000453259 ZNF79Q15937 498 aa10.12□□□□□ -0.79
LYSMD3-202ENST00000453259 MLANAQ16655 118 aa10.12□□□□□ -0.79
LYSMD3-202ENST00000453259 RRN3P1Q2M238 152 aa10.12□□□□□ -0.79
LYSMD3-202ENST00000453259 RNASE10Q5GAN6 216 aaKnown RBP10.12□□□□□ -0.79
LYSMD3-202ENST00000453259 TMEM88Q6PEY1 159 aa10.12□□□□□ -0.79
LYSMD3-202ENST00000453259 ZNF709Q8N972 641 aa10.12□□□□□ -0.79
LYSMD3-202ENST00000453259 ABHD1Q96SE0 405 aa10.12□□□□□ -0.79
LYSMD3-202ENST00000453259 ATG101Q9BSB4 218 aa10.12□□□□□ -0.79
LYSMD3-202ENST00000453259 COPZ2Q9P299 210 aa10.12□□□□□ -0.79
LYSMD3-202ENST00000453259 IGHV3OR16-12A0A075B7B8 117 aa10.11□□□□□ -0.79
LYSMD3-202ENST00000453259 NBDYA0A0U1RRE5 68 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms