RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 ST8SIA2Q92186 375 aa5.2□□□□□ -1.58
VPS41-208ENST00000448833 RBPMSQ93062 196 aaKnown RBP5.2□□□□□ -1.58
VPS41-208ENST00000448833 ZNF414Q96IQ9 312 aa5.2□□□□□ -1.58
VPS41-208ENST00000448833 PRRT1Q99946 306 aa5.2□□□□□ -1.58
VPS41-208ENST00000448833 C1QTNF4Q9BXJ3 329 aa5.2□□□□□ -1.58
VPS41-208ENST00000448833 HRH4Q9H3N8 390 aa5.2□□□□□ -1.58
VPS41-208ENST00000448833 SEPSECSQ9HD40 501 aaKnown RBP5.2□□□□□ -1.58
VPS41-208ENST00000448833 RABAC1Q9UI14 185 aa5.2□□□□□ -1.58
VPS41-208ENST00000448833 PLECQ15149 4684 aaKnown RBP5.19□□□□□ -1.58
VPS41-208ENST00000448833 IGHV3OR16-13A0A075B7E8 117 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 IGHV3-74A0A0B4J1X5 117 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 CTDSPLO15194 276 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 GSTZ1O43708 216 aaPredicted RBP5.19□□□□□ -1.58
VPS41-208ENST00000448833 FABP1P07148 127 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 AKAIN1P0CW23 69 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 ANXA3P12429 323 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 MIFP14174 115 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 P2RY1P47900 373 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 PPP5CP53041 499 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 DEFB131AP59861 70 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 YPEL3P61236 119 aaPredicted RBP5.19□□□□□ -1.58
VPS41-208ENST00000448833 SNRPD3P62318 126 aaKnown RBP5.19□□□□□ -1.58
VPS41-208ENST00000448833 CTF1Q16619 201 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 BSXQ3C1V8 233 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 SP6Q3SY56 376 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 C2orf83Q53S99 150 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 GPR141Q7Z602 305 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 STXBP6Q8NFX7 210 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 OR13C8Q8NGS7 320 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 MARCH1Q8TCQ1 289 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 IL22RA2Q969J5 263 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 ARPC5LQ9BPX5 153 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 BCL7BQ9BQE9 202 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 RSL24D1Q9UHA3 163 aaKnown RBP5.19□□□□□ -1.58
VPS41-208ENST00000448833 SCP2D1Q9UJQ7 156 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 U3KQ87 197 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 BIRC6Q9NR09 4857 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 AGRNO00468 2067 aa5.19□□□□□ -1.58
VPS41-208ENST00000448833 A0A1B0GU03 582 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 CRYM-AS1A6NIL9 109 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 CEBPZOSA8MTT3 80 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 K7EQG2 157 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 APOHP02749 345 aaPredicted RBP5.18□□□□□ -1.58
VPS41-208ENST00000448833 HNRNPCP07910 306 aaKnown RBP eCLIP5.18□□□□□ -1.58
VPS41-208ENST00000448833 SULT1A3P0DMM9 295 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 SULT1A4P0DMN0 295 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 S100A7P31151 101 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 SRPXP78539 464 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 IZUMO4Q1ZYL8 232 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 SPINK9Q5DT21 86 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 RNASE12Q5GAN4 147 aaKnown RBP5.18□□□□□ -1.58
VPS41-208ENST00000448833 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 TMEM268Q5VZI3 342 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 SLC24A4Q8NFF2 622 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 GLYATL2Q8WU03 294 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 SMIM4Q8WVI0 70 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 DIRAS2Q96HU8 199 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 RTBDNQ9BSG5 229 aaPredicted RBP5.18□□□□□ -1.58
VPS41-208ENST00000448833 MRPS26Q9BYN8 205 aaKnown RBP5.18□□□□□ -1.58
VPS41-208ENST00000448833 MRPL18Q9H0U6 180 aaKnown RBP5.18□□□□□ -1.58
VPS41-208ENST00000448833 NAA60Q9H7X0 242 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 FBXL17Q9UF56 701 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 TMEM56-RWDD3S4R434 201 aa5.18□□□□□ -1.58
VPS41-208ENST00000448833 IGHV3-66A0A0C4DH42 116 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 NOL3O60936 208 aaKnown RBP5.17□□□□□ -1.58
VPS41-208ENST00000448833 IFNA10P01566 189 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 IGKV1-17P01599 117 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 OR5AC1P0C628 307 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 RD3LP0DJH9 198 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 NPY1RP25929 384 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 OR10J1P30954 320 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 FAUP35544 74 aaKnown RBP5.17□□□□□ -1.58
VPS41-208ENST00000448833 CCR6P51684 374 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 EWSR1Q01844 656 aaKnown RBP eCLIP5.17□□□□□ -1.58
VPS41-208ENST00000448833 DHRS2Q13268 280 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 IL18Q14116 193 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 ZNF124Q15973 351 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 SAMD13Q5VXD3 122 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 LEMD1Q68G75 181 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 PRSS54Q6PEW0 395 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 C16orf54Q6UWD8 224 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 TRPT1Q86TN4 253 aaKnown RBP5.17□□□□□ -1.58
VPS41-208ENST00000448833 SELENOHQ8IZQ5 122 aaKnown RBP5.17□□□□□ -1.58
VPS41-208ENST00000448833 LILRB2Q8N423 598 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 OR4D10Q8NGI6 311 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 RAB2BQ8WUD1 216 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 FNDC4Q9H6D8 234 aaPredicted RBP5.17□□□□□ -1.58
VPS41-208ENST00000448833 CACNG5Q9UF02 275 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 GPR132Q9UNW8 380 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 U3KQE9 123 aa5.17□□□□□ -1.58
VPS41-208ENST00000448833 TRAV10A0A0B4J240 114 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 A0A0B4J2A0 478 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 DUXBA0A1W2PPF3 345 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 ANKRD20A5PA0PJZ0 165 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 ZNF705EA8MWA4 302 aaPredicted RBP5.16□□□□□ -1.58
VPS41-208ENST00000448833 TOMM40O96008 361 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 CFDP00746 253 aaPredicted RBP5.16□□□□□ -1.58
VPS41-208ENST00000448833 IL4P05112 153 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 ZNF688P0C7X2 276 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 IGLC1P0CG04 106 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms