RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 CABIN1Q9Y6J0 2220 aa14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 BRCA1P38398 1863 aaKnown RBP14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 TRAV8-2A0A0B4J237 113 aa14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 FAM90A9PA6NNJ1 464 aa14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 FAM89BQ8N5H3 189 aa14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 IGHV2-26A0A0B4J1V2 119 aa14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 OVOL1O14753 267 aa14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 NXT2Q9NPJ8 142 aaKnown RBP14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 NAPSAO96009 420 aa14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 IGKV2-40A0A087WW87 121 aaPredicted RBP14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 IGKV2D-40P01614 121 aaPredicted RBP14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 TMEM219Q86XT9 240 aa14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 GTF3AQ92664 365 aaKnown RBP14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 C5orf30Q96GV9 206 aa14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 CHCHD5Q9BSY4 110 aa14.85□□□□□ -0.03
ARHGEF28-203ENST00000426542 HEATR5BQ9P2D3 2071 aa14.84□□□□□ -0.03
ARHGEF28-203ENST00000426542 ZNF672Q499Z4 452 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF28-203ENST00000426542 ORMDL2Q53FV1 153 aa14.84□□□□□ -0.03
ARHGEF28-203ENST00000426542 DPH3P1Q9H4G8 78 aa14.84□□□□□ -0.03
ARHGEF28-203ENST00000426542 SLC25A15Q9Y619 301 aa14.84□□□□□ -0.03
ARHGEF28-203ENST00000426542 KLRD1Q13241 179 aa14.84□□□□□ -0.03
ARHGEF28-203ENST00000426542 C11orf68Q9H3H3 251 aaKnown RBP14.84□□□□□ -0.03
ARHGEF28-203ENST00000426542 OR9G4Q8NGQ1 327 aa14.84□□□□□ -0.03
ARHGEF28-203ENST00000426542 PDCD11Q14690 1871 aaKnown RBP14.84□□□□□ -0.03
ARHGEF28-203ENST00000426542 H0YIZ8 118 aa14.84□□□□□ -0.03
ARHGEF28-203ENST00000426542 IGKCP01834 107 aa14.84□□□□□ -0.03
ARHGEF28-203ENST00000426542 FNDC4Q9H6D8 234 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF28-203ENST00000426542 MBNL3Q9NUK0 354 aaKnown RBP14.84□□□□□ -0.03
ARHGEF28-203ENST00000426542 A0A0U1RRA0 63 aa14.83□□□□□ -0.03
ARHGEF28-203ENST00000426542 NPIPB5A8MRT5 1133 aa14.83□□□□□ -0.03
ARHGEF28-203ENST00000426542 ZNF688P0C7X2 276 aa14.83□□□□□ -0.03
ARHGEF28-203ENST00000426542 TNFRSF14Q92956 283 aa14.83□□□□□ -0.03
ARHGEF28-203ENST00000426542 LAMTOR2Q9Y2Q5 125 aa14.83□□□□□ -0.03
ARHGEF28-203ENST00000426542 RPL15P61313 204 aaKnown RBP14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 DERL1Q9BUN8 251 aa14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 SAP30O75446 220 aa14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 CRYGSP22914 178 aa14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 ID3Q02535 119 aa14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 TMEM200BQ69YZ2 307 aa14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 J3QRE1 110 aa14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 HOXA3O43365 443 aaPredicted RBP14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 CD59P13987 128 aa14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 FOXG1P55316 489 aaPredicted RBP14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 CFHR1Q03591 330 aa14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 ZNF362Q5T0B9 420 aaPredicted RBP14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 CLDN16Q9Y5I7 305 aa14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 A0A1B0GV72 72 aa14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 GFI1Q99684 422 aa14.83□□□□□ -0.04
ARHGEF28-203ENST00000426542 IGKV1-12A0A0C4DH73 117 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 IGKV1D-12P01611 117 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 GZMBP10144 247 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 DTX2Q86UW9 622 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 F2Z2F3 143 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 F8VVB4 439 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 F8VWA3 439 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 GHRHP01286 108 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 BRWD3Q6RI45 1802 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 NTN3O00634 580 aaPredicted RBP14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 PPBPP02775 128 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 C10orf55Q5SWW7 151 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 GNB1LQ9BYB4 327 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 CHD5Q8TDI0 1954 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 SELLP14151 372 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 GGNQ86UU5 652 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 TSKUQ8WUA8 353 aa14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 PHLDA1Q8WV24 401 aaPredicted RBP14.82□□□□□ -0.04
ARHGEF28-203ENST00000426542 IGHV3-73A0A0B4J1V6 119 aa14.81□□□□□ -0.04
ARHGEF28-203ENST00000426542 C15orf32Q32M92 178 aa14.81□□□□□ -0.04
ARHGEF28-203ENST00000426542 OR2K2Q8NGT1 345 aa14.81□□□□□ -0.04
ARHGEF28-203ENST00000426542 TAF1LQ8IZX4 1826 aa14.81□□□□□ -0.04
ARHGEF28-203ENST00000426542 ERVK11-1P61568 191 aa14.81□□□□□ -0.04
ARHGEF28-203ENST00000426542 FOXL1Q12952 345 aa14.81□□□□□ -0.04
ARHGEF28-203ENST00000426542 WDR83OSQ9Y284 106 aa14.81□□□□□ -0.04
ARHGEF28-203ENST00000426542 TREML4Q6UXN2 200 aa14.8□□□□□ -0.04
ARHGEF28-203ENST00000426542 SPATA31B1PQ5VZV4 182 aa14.8□□□□□ -0.04
ARHGEF28-203ENST00000426542 TRAV9-2A0A087WT02 112 aa14.8□□□□□ -0.04
ARHGEF28-203ENST00000426542 PMS2P5A8MQ11 134 aa14.8□□□□□ -0.04
ARHGEF28-203ENST00000426542 IGHV1-8P0DP01 117 aa14.8□□□□□ -0.04
ARHGEF28-203ENST00000426542 TIMP3P35625 211 aa14.8□□□□□ -0.04
ARHGEF28-203ENST00000426542 DSCR9P59020 149 aa14.8□□□□□ -0.04
ARHGEF28-203ENST00000426542 LINC00158P58513 81 aa14.8□□□□□ -0.04
ARHGEF28-203ENST00000426542 ICE1Q9Y2F5 2266 aa14.8□□□□□ -0.04
ARHGEF28-203ENST00000426542 TDGF1P3P51864 188 aa14.8□□□□□ -0.04
ARHGEF28-203ENST00000426542 TEX38Q6PEX7 206 aa14.8□□□□□ -0.04
ARHGEF28-203ENST00000426542 CHCHD1Q96BP2 118 aaKnown RBP14.8□□□□□ -0.04
ARHGEF28-203ENST00000426542 PLSCR4Q9NRQ2 329 aa14.8□□□□□ -0.04
ARHGEF28-203ENST00000426542 EFNA2O43921 213 aa14.79□□□□□ -0.04
ARHGEF28-203ENST00000426542 SNRNP200O75643 2136 aaKnown RBP14.79□□□□□ -0.04
ARHGEF28-203ENST00000426542 CD300EQ496F6 205 aaPredicted RBP14.79□□□□□ -0.04
ARHGEF28-203ENST00000426542 RCHY1Q96PM5 261 aa14.79□□□□□ -0.04
ARHGEF28-203ENST00000426542 IGHV1-3A0A0C4DH29 117 aa14.79□□□□□ -0.04
ARHGEF28-203ENST00000426542 PLNP26678 52 aa14.79□□□□□ -0.04
ARHGEF28-203ENST00000426542 TPTE2P1Q5T6R2 138 aa14.79□□□□□ -0.04
ARHGEF28-203ENST00000426542 UBE2DNLQ8IWF7 75 aa14.79□□□□□ -0.04
ARHGEF28-203ENST00000426542 EXOC3-AS1Q8N2X6 119 aa14.79□□□□□ -0.04
ARHGEF28-203ENST00000426542 DEFB104AQ8WTQ1 72 aa14.79□□□□□ -0.04
ARHGEF28-203ENST00000426542 RPUSD1Q9UJJ7 312 aaKnown RBP14.79□□□□□ -0.04
ARHGEF28-203ENST00000426542 MPZP25189 248 aa14.79□□□□□ -0.04
ARHGEF28-203ENST00000426542 SCRT1Q9BWW7 348 aa14.79□□□□□ -0.04
ARHGEF28-203ENST00000426542 PRADC1Q9BSG0 188 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms