RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 F6UB75 175 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 MFNGO00587 321 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 IGLV2-11P01706 119 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 RLN2P04090 185 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 CRYGDP07320 174 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 AZU1P20160 251 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 HOXA5P20719 270 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 GADD45AP24522 165 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 TSPOP30536 169 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 CDKN1BP46527 198 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 KRTAP10-4P60372 401 aaPredicted RBP4.24□□□□□ -1.73
SDCBP-203ENST00000424270 SPINK13Q1W4C9 94 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 LINC01620Q4KN68 170 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 TMEM144Q7Z5S9 345 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 CCDC197Q8NCU1 140 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 OR52I1Q8NGK6 324 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 OR51H1Q8NH63 302 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 SECTM1Q8WVN6 248 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 RAB3CQ96E17 227 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 DERL3Q96Q80 235 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 GABARAPL3Q9BY60 117 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 Q9HAA7 133 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 NDUFA4L2Q9NRX3 87 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 FKBP11Q9NYL4 201 aa4.24□□□□□ -1.73
SDCBP-203ENST00000424270 A0A0B4J293 547 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 ZNF98A6NK75 572 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 H3BNG1 76 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 M0R2Z0 102 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 GSTZ1O43708 216 aaPredicted RBP4.23□□□□□ -1.73
SDCBP-203ENST00000424270 TMEM50AO95807 157 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 HLA-DQB1P01920 261 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 FCER2P06734 321 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 CTXN2P0C2S0 81 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 ZNF182P17025 639 aaPredicted RBP4.23□□□□□ -1.73
SDCBP-203ENST00000424270 SNCAP37840 140 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 ETV1P50549 477 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 HNRNPA3P51991 378 aaKnown RBP4.23□□□□□ -1.73
SDCBP-203ENST00000424270 ERHP84090 104 aaKnown RBP4.23□□□□□ -1.73
SDCBP-203ENST00000424270 PRCDQ00LT1 54 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 ZNF79Q15937 498 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 AADACL3Q5VUY0 350 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 Q6ZSA8 131 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 C10orf126Q8N4M7 172 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 LRTM2Q8N967 370 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 Q8WTZ3 238 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 LINC00467Q9BRT7 94 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 CHAC1Q9BUX1 264 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 RPRMQ9NS64 109 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 DOK5Q9P104 306 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 PRNDQ9UKY0 176 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 ICOSQ9Y6W8 199 aa4.23□□□□□ -1.73
SDCBP-203ENST00000424270 MUC2Q02817 5179 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 TRGV2A0A075B6R0 118 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 TRAV12-2A0A075B6T6 113 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 IGKV1D-13A0A0B4J2D9 117 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 RBFOX3A6NFN3 312 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 MARCH11A6NNE9 402 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 FAM25EA8MYX2 175 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 ATP5HO75947 161 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 KRASP01116 189 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 LIMS3P0CW19 117 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 LIMS4P0CW20 117 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 IGKV1-13P0DP09 117 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 UCP1P25874 307 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 OPRK1P41145 380 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 CBX5P45973 191 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 PSMB3P49720 205 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 TMEM50BP56557 158 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 BRWD1-AS2P59051 145 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 ARPC4P59998 168 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 RPS11P62280 158 aaKnown RBP eCLIP4.22□□□□□ -1.73
SDCBP-203ENST00000424270 TBCEQ15813 527 aaPredicted RBP4.22□□□□□ -1.73
SDCBP-203ENST00000424270 ZIK1Q3SY52 487 aaPredicted RBP4.22□□□□□ -1.73
SDCBP-203ENST00000424270 TIGITQ495A1 244 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 PLAC9Q5JTB6 97 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 Q6ZRU5 148 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 GPR141Q7Z602 305 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 CCDC28AQ8IWP9 274 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 BAP18Q8IXM2 172 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 HSD17B11Q8NBQ5 300 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 OR6F1Q8NGZ6 308 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 CIRBP-AS1Q8TBR5 109 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 LGALS14Q8TCE9 139 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 TMEM37Q8WXS4 190 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 DAZAP1Q96EP5 407 aaKnown RBP4.22□□□□□ -1.73
SDCBP-203ENST00000424270 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 TMPRSS5Q9H3S3 457 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 CCL28Q9NRJ3 127 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 CACNG5Q9UF02 275 aa4.22□□□□□ -1.73
SDCBP-203ENST00000424270 RCL1Q9Y2P8 373 aaKnown RBP4.22□□□□□ -1.73
SDCBP-203ENST00000424270 A0A0J9YX75 114 aa4.21□□□□□ -1.74
SDCBP-203ENST00000424270 LRCOL1A6NCL2 159 aa4.21□□□□□ -1.74
SDCBP-203ENST00000424270 SNURFLB1AK76 121 aa4.21□□□□□ -1.74
SDCBP-203ENST00000424270 K7EP13 123 aa4.21□□□□□ -1.74
SDCBP-203ENST00000424270 LECT2O14960 151 aa4.21□□□□□ -1.74
SDCBP-203ENST00000424270 RBFOX2O43251 390 aaKnown RBP eCLIP4.21□□□□□ -1.74
SDCBP-203ENST00000424270 IGLV2-14P01704 120 aa4.21□□□□□ -1.74
SDCBP-203ENST00000424270 IL4P05112 153 aa4.21□□□□□ -1.74
SDCBP-203ENST00000424270 ALPLP05186 524 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms