RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 TRIM16LQ309B1 348 aa12.09□□□□□ -0.47
UPF3AP3-201ENST00000420996 SP6Q3SY56 376 aa12.09□□□□□ -0.47
UPF3AP3-201ENST00000420996 SCRT1Q9BWW7 348 aa12.09□□□□□ -0.47
UPF3AP3-201ENST00000420996 DNAH2Q9P225 4427 aa12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 FAM90A26D6RGX4 464 aa12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 SLC25A4P12235 298 aa12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 ELK1P19419 428 aa12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 UCP1P25874 307 aa12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 RND2P52198 227 aa12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 AARDQ4LEZ3 155 aa12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 RNASE10Q5GAN6 216 aaKnown RBP12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 PRSS54Q6PEW0 395 aa12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 ARRDC1Q8N5I2 433 aa12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 ZFAND1Q8TCF1 268 aa12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 NEU1Q99519 415 aa12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 NRN1Q9NPD7 142 aa12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 COPZ2Q9P299 210 aa12.08□□□□□ -0.48
UPF3AP3-201ENST00000420996 B3GALNT1O75752 331 aa12.07□□□□□ -0.48
UPF3AP3-201ENST00000420996 OR10J1P30954 320 aa12.07□□□□□ -0.48
UPF3AP3-201ENST00000420996 DHODHQ02127 395 aa12.07□□□□□ -0.48
UPF3AP3-201ENST00000420996 Q6ZRM9 215 aa12.07□□□□□ -0.48
UPF3AP3-201ENST00000420996 CCDC71LQ8N9Z2 235 aa12.07□□□□□ -0.48
UPF3AP3-201ENST00000420996 OR52E5Q8NH55 327 aa12.07□□□□□ -0.48
UPF3AP3-201ENST00000420996 RNASE11Q8TAA1 199 aaKnown RBP12.07□□□□□ -0.48
UPF3AP3-201ENST00000420996 RNASEH2CQ8TDP1 164 aaKnown RBP12.07□□□□□ -0.48
UPF3AP3-201ENST00000420996 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.07□□□□□ -0.48
UPF3AP3-201ENST00000420996 KLK11Q9UBX7 282 aa12.07□□□□□ -0.48
UPF3AP3-201ENST00000420996 DNAH17Q9UFH2 4485 aa12.07□□□□□ -0.48
UPF3AP3-201ENST00000420996 SMIM9A6NGZ8 99 aa12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 HPGDSO60760 199 aa12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 IFNA10P01566 189 aa12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 CD74P04233 296 aa12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 CD3DP04234 171 aa12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 SPART-AS1P0CW21 52 aa12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 HLA-DRB4P13762 266 aa12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 USF2Q15853 346 aaPredicted RBP12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 C2orf83Q53S99 150 aa12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 ZNF705AQ6ZN79 300 aaPredicted RBP12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 FAM219AQ8IW50 185 aa12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 FAM210BQ96KR6 192 aa12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 HEYLQ9NQ87 328 aaPredicted RBP12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 HLA-DRB4X5D2U9 266 aa12.06□□□□□ -0.48
UPF3AP3-201ENST00000420996 TMEM189A5PLL7 270 aa12.05□□□□□ -0.48
UPF3AP3-201ENST00000420996 ZNF705FA8MVS1 300 aaPredicted RBP12.05□□□□□ -0.48
UPF3AP3-201ENST00000420996 BUB3O43684 328 aa12.05□□□□□ -0.48
UPF3AP3-201ENST00000420996 IFNA21P01568 189 aa12.05□□□□□ -0.48
UPF3AP3-201ENST00000420996 IL4P05112 153 aa12.05□□□□□ -0.48
UPF3AP3-201ENST00000420996 ZNF705DP0CH99 300 aaPredicted RBP12.05□□□□□ -0.48
UPF3AP3-201ENST00000420996 ZNF705BP0CI00 300 aaPredicted RBP12.05□□□□□ -0.48
UPF3AP3-201ENST00000420996 TBPP20226 339 aa12.05□□□□□ -0.48
UPF3AP3-201ENST00000420996 SIGLEC15Q6ZMC9 328 aa12.05□□□□□ -0.48
UPF3AP3-201ENST00000420996 TERB2Q8NHR7 220 aa12.05□□□□□ -0.48
UPF3AP3-201ENST00000420996 VCX3AQ9NNX9 186 aa12.05□□□□□ -0.48
UPF3AP3-201ENST00000420996 GSTZ1O43708 216 aaPredicted RBP12.04□□□□□ -0.48
UPF3AP3-201ENST00000420996 CDS2O95674 445 aa12.04□□□□□ -0.48
UPF3AP3-201ENST00000420996 NKX2-1P43699 371 aaPredicted RBP12.04□□□□□ -0.48
UPF3AP3-201ENST00000420996 RNASE12Q5GAN4 147 aaKnown RBP12.04□□□□□ -0.48
UPF3AP3-201ENST00000420996 ETFRF1Q6IPR1 90 aa12.04□□□□□ -0.48
UPF3AP3-201ENST00000420996 Q6ZR54 194 aa12.04□□□□□ -0.48
UPF3AP3-201ENST00000420996 OR13C8Q8NGS7 320 aa12.04□□□□□ -0.48
UPF3AP3-201ENST00000420996 MTFP1Q9UDX5 166 aa12.04□□□□□ -0.48
UPF3AP3-201ENST00000420996 TOMM40O96008 361 aa12.03□□□□□ -0.48
UPF3AP3-201ENST00000420996 RD3LP0DJH9 198 aa12.03□□□□□ -0.48
UPF3AP3-201ENST00000420996 NCS1P62166 190 aa12.03□□□□□ -0.48
UPF3AP3-201ENST00000420996 UBE2DNLQ8IWF7 75 aa12.03□□□□□ -0.48
UPF3AP3-201ENST00000420996 SLC24A4Q8NFF2 622 aa12.03□□□□□ -0.48
UPF3AP3-201ENST00000420996 OR52I2Q8NH67 350 aa12.03□□□□□ -0.48
UPF3AP3-201ENST00000420996 GLYATL2Q8WU03 294 aa12.03□□□□□ -0.48
UPF3AP3-201ENST00000420996 NPIPB3Q92617 1050 aa12.03□□□□□ -0.48
UPF3AP3-201ENST00000420996 TMEM222Q9H0R3 208 aa12.03□□□□□ -0.48
UPF3AP3-201ENST00000420996 DYNC1H1Q14204 4646 aaKnown RBP12.02□□□□□ -0.48
UPF3AP3-201ENST00000420996 IGLV2-18A0A075B6J9 118 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 A0A087WXM4 84 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 TEX48A0A1B0GUV7 120 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 CEBPZOSA8MTT3 80 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 FAM25AB3EWG3 89 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 FAM25CB3EWG5 89 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 FAM25GB3EWG6 89 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 NXPH3O95157 252 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 EMP1P54849 157 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 GDF5OSQ5U4N7 250 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 MZT2AQ6P582 158 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 OR4D10Q8NGI6 311 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 MARCH1Q8TCQ1 289 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 TMEM170AQ8WVE7 144 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 RBPMSQ93062 196 aaKnown RBP12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 ABHD1Q96SE0 405 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 DKK2Q9UBU2 259 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 RFNGQ9Y644 331 aa12.02□□□□□ -0.49
UPF3AP3-201ENST00000420996 OR5AC1P0C628 307 aa12.01□□□□□ -0.49
UPF3AP3-201ENST00000420996 PSG1P11464 419 aa12.01□□□□□ -0.49
UPF3AP3-201ENST00000420996 RORCP51449 518 aa12.01□□□□□ -0.49
UPF3AP3-201ENST00000420996 VBP1P61758 197 aa12.01□□□□□ -0.49
UPF3AP3-201ENST00000420996 RNF212Q495C1 297 aa12.01□□□□□ -0.49
UPF3AP3-201ENST00000420996 SCGB2B2Q4G0G5 96 aa12.01□□□□□ -0.49
UPF3AP3-201ENST00000420996 SOHLH1Q5JUK2 328 aa12.01□□□□□ -0.49
UPF3AP3-201ENST00000420996 NOXA1Q86UR1 476 aa12.01□□□□□ -0.49
UPF3AP3-201ENST00000420996 SELENOHQ8IZQ5 122 aaKnown RBP12.01□□□□□ -0.49
UPF3AP3-201ENST00000420996 TMEM229BQ8NBD8 167 aa12.01□□□□□ -0.49
UPF3AP3-201ENST00000420996 LHFPL5Q8TAF8 219 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms