RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 RNF114Q9Y508 228 aa13.44□□□□□ -0.26
LIMS2-208ENST00000410011 SVILO95425 2214 aa13.44□□□□□ -0.26
LIMS2-208ENST00000410011 PLCE1Q9P212 2302 aa13.44□□□□□ -0.26
LIMS2-208ENST00000410011 NIT1Q86X76 327 aa13.44□□□□□ -0.26
LIMS2-208ENST00000410011 SAP30LQ9HAJ7 183 aa13.44□□□□□ -0.26
LIMS2-208ENST00000410011 SSUH2Q9Y2M2 353 aa13.44□□□□□ -0.26
LIMS2-208ENST00000410011 REG1BP48304 166 aa13.43□□□□□ -0.26
LIMS2-208ENST00000410011 MRGPRG-AS1Q2M3A8 158 aa13.43□□□□□ -0.26
LIMS2-208ENST00000410011 LINC00305Q7Z4B0 112 aa13.43□□□□□ -0.26
LIMS2-208ENST00000410011 NUP35Q8NFH5 326 aa13.43□□□□□ -0.26
LIMS2-208ENST00000410011 C18orf32Q8TCD1 76 aa13.43□□□□□ -0.26
LIMS2-208ENST00000410011 PERPQ96FX8 193 aa13.43□□□□□ -0.26
LIMS2-208ENST00000410011 TRGV9Q99603 122 aa13.43□□□□□ -0.26
LIMS2-208ENST00000410011 FAM103A1Q9BTL3 118 aaKnown RBP13.43□□□□□ -0.26
LIMS2-208ENST00000410011 EPDR1Q9UM22 224 aa13.43□□□□□ -0.26
LIMS2-208ENST00000410011 BDP1A6H8Y1 2624 aa13.43□□□□□ -0.26
LIMS2-208ENST00000410011 GAGE1Q13065 139 aa13.42□□□□□ -0.26
LIMS2-208ENST00000410011 SLAQ13239 276 aa13.42□□□□□ -0.26
LIMS2-208ENST00000410011 SPACA3Q8IXA5 215 aa13.42□□□□□ -0.26
LIMS2-208ENST00000410011 TEX45Q8NA69 505 aa13.42□□□□□ -0.26
LIMS2-208ENST00000410011 DSPP15924 2871 aaKnown RBP13.42□□□□□ -0.26
LIMS2-208ENST00000410011 A0A1W2PPI3 338 aa13.42□□□□□ -0.26
LIMS2-208ENST00000410011 VSTM5A8MXK1 200 aa13.42□□□□□ -0.26
LIMS2-208ENST00000410011 NBEAQ8NFP9 2946 aa13.42□□□□□ -0.26
LIMS2-208ENST00000410011 CA1P00915 261 aaPredicted RBP13.41□□□□□ -0.26
LIMS2-208ENST00000410011 CA7P43166 264 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 PLP1P60201 277 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 DIAPH2-AS1Q14236 149 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 TMEM155Q4W5P6 130 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 C10orf55Q5SWW7 151 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 TMEM116Q8NCL8 245 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 TNFRSF14Q92956 283 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 TMEM68Q96MH6 324 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 MLST8Q9BVC4 326 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 JKAMPQ9P055 326 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 MRPL36Q9P0J6 103 aaKnown RBP13.41□□□□□ -0.26
LIMS2-208ENST00000410011 C3orf79P0CE67 100 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 MFAP2P55001 183 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 CT83Q5H943 113 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 NHLRC2Q8NBF2 726 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 GPR82Q96P67 336 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 RBM14Q96PK6 669 aaKnown RBP13.41□□□□□ -0.26
LIMS2-208ENST00000410011 SSBP3Q9BWW4 388 aaPredicted RBP13.41□□□□□ -0.26
LIMS2-208ENST00000410011 TNFRSF19Q9NS68 423 aa13.41□□□□□ -0.26
LIMS2-208ENST00000410011 SPENQ96T58 3664 aaKnown RBP13.4□□□□□ -0.26
LIMS2-208ENST00000410011 ICE1Q9Y2F5 2266 aa13.4□□□□□ -0.26
LIMS2-208ENST00000410011 A0A0G2JNJ9 132 aa13.4□□□□□ -0.26
LIMS2-208ENST00000410011 IGLC7A0M8Q6 106 aa13.4□□□□□ -0.26
LIMS2-208ENST00000410011 PMCHP20382 165 aa13.4□□□□□ -0.26
LIMS2-208ENST00000410011 LOXP28300 417 aaPredicted RBP13.4□□□□□ -0.26
LIMS2-208ENST00000410011 TMEM190Q8WZ59 177 aa13.4□□□□□ -0.26
LIMS2-208ENST00000410011 H1FXQ92522 213 aaKnown RBP13.4□□□□□ -0.26
LIMS2-208ENST00000410011 Q9UFV3 132 aa13.4□□□□□ -0.26
LIMS2-208ENST00000410011 A0A1B0GXF2 115 aa13.4□□□□□ -0.26
LIMS2-208ENST00000410011 CORTO00230 105 aa13.4□□□□□ -0.26
LIMS2-208ENST00000410011 THBDP07204 575 aa13.4□□□□□ -0.26
LIMS2-208ENST00000410011 BSPH1Q075Z2 132 aa13.4□□□□□ -0.26
LIMS2-208ENST00000410011 BORCS7Q96B45 105 aa13.4□□□□□ -0.26
LIMS2-208ENST00000410011 PRSS22Q9GZN4 317 aa13.4□□□□□ -0.26
LIMS2-208ENST00000410011 UQCR10Q9UDW1 63 aa13.4□□□□□ -0.26
LIMS2-208ENST00000410011 SOX21Q9Y651 276 aaPredicted RBP13.4□□□□□ -0.26
LIMS2-208ENST00000410011 TRAV34A0A0B4J273 112 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 C22orf46C9J442 243 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 SLC25A17O43808 307 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 CRYGBP07316 175 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 UBE2G1P62253 170 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 PMCHL1Q16048 86 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 GDF5OSQ5U4N7 250 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 LYPD2Q6UXB3 125 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 WFDC8Q8IUA0 241 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 C22orf15Q8WYQ4 148 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 PRRG2O14669 202 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 IGHV1-8P0DP01 117 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 ZNF25P17030 456 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-208ENST00000410011 SPATA45Q537H7 98 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 C11orf42Q8N5U0 333 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 KLHDC1Q8N7A1 406 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 CCL17Q92583 94 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 ALKBH7Q9BT30 221 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-208ENST00000410011 CTSZQ9UBR2 303 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 OTOGLQ3ZCN5 2332 aa13.39□□□□□ -0.27
LIMS2-208ENST00000410011 HIGD1CA8MV81 97 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 K7EM74 188 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 TOMM40O96008 361 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 NBEAP1P0C6P0 100 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 IGLC2P0DOY2 106 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 IGLC3P0DOY3 106 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 FAM162BQ5T6X4 162 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 RNASE6Q93091 150 aaKnown RBP13.38□□□□□ -0.27
LIMS2-208ENST00000410011 FMC1Q96HJ9 113 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 ZNF492Q9P255 531 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 DLEU1O43261 78 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 ZNF841Q6ZN19 808 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 C5orf17Q8NAS9 161 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 C8orf46Q8TAG6 207 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 TMEM208Q9BTX3 173 aa13.38□□□□□ -0.27
LIMS2-208ENST00000410011 PGPA6NDG6 321 aa13.37□□□□□ -0.27
LIMS2-208ENST00000410011 HYPMO75409 117 aa13.37□□□□□ -0.27
LIMS2-208ENST00000410011 SLC25A5P05141 298 aaKnown RBP13.37□□□□□ -0.27
LIMS2-208ENST00000410011 RITA1Q96K30 269 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms