RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 SDC2P34741 201 aa11.73□□□□□ -0.53
CHMP3-203ENST00000409225 NKX2-1P43699 371 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-203ENST00000409225 HOXA1P49639 335 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-203ENST00000409225 KRTAP10-2P60368 255 aa11.73□□□□□ -0.53
CHMP3-203ENST00000409225 SIGLEC15Q6ZMC9 328 aa11.73□□□□□ -0.53
CHMP3-203ENST00000409225 OR6F1Q8NGZ6 308 aa11.73□□□□□ -0.53
CHMP3-203ENST00000409225 C7orf50Q9BRJ6 194 aaKnown RBP11.73□□□□□ -0.53
CHMP3-203ENST00000409225 GOLT1BQ9Y3E0 138 aa11.73□□□□□ -0.53
CHMP3-203ENST00000409225 RPS10-NUDT3A0A1W2PQS6 291 aa11.72□□□□□ -0.53
CHMP3-203ENST00000409225 INS-IGF2F8WCM5 200 aa11.72□□□□□ -0.53
CHMP3-203ENST00000409225 NUDT3O95989 172 aa11.72□□□□□ -0.53
CHMP3-203ENST00000409225 SCAND1P57086 179 aa11.72□□□□□ -0.53
CHMP3-203ENST00000409225 TAS2R46P59540 309 aa11.72□□□□□ -0.53
CHMP3-203ENST00000409225 ZNF709Q8N972 641 aa11.72□□□□□ -0.53
CHMP3-203ENST00000409225 Q8WTZ3 238 aa11.72□□□□□ -0.53
CHMP3-203ENST00000409225 TRAV30A0A087WSZ9 112 aa11.71□□□□□ -0.53
CHMP3-203ENST00000409225 EBAG9O00559 213 aa11.71□□□□□ -0.53
CHMP3-203ENST00000409225 ETV6P41212 452 aa11.71□□□□□ -0.53
CHMP3-203ENST00000409225 DHODHQ02127 395 aa11.71□□□□□ -0.53
CHMP3-203ENST00000409225 USF2Q15853 346 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-203ENST00000409225 C1orf158Q8N1D5 194 aa11.71□□□□□ -0.53
CHMP3-203ENST00000409225 OR4B1Q8NGF8 309 aa11.71□□□□□ -0.53
CHMP3-203ENST00000409225 LINC00052Q96N35 136 aa11.71□□□□□ -0.53
CHMP3-203ENST00000409225 SLC35B3Q9H1N7 401 aa11.71□□□□□ -0.53
CHMP3-203ENST00000409225 ENY2Q9NPA8 101 aa11.71□□□□□ -0.53
CHMP3-203ENST00000409225 ANAPC10Q9UM13 185 aa11.71□□□□□ -0.53
CHMP3-203ENST00000409225 SSR3Q9UNL2 185 aa11.71□□□□□ -0.53
CHMP3-203ENST00000409225 A0A0B4J293 547 aa11.7□□□□□ -0.54
CHMP3-203ENST00000409225 IL4P05112 153 aa11.7□□□□□ -0.54
CHMP3-203ENST00000409225 PSMB9P28065 219 aa11.7□□□□□ -0.54
CHMP3-203ENST00000409225 HRH1P35367 487 aa11.7□□□□□ -0.54
CHMP3-203ENST00000409225 RPL5P46777 297 aaKnown RBP11.7□□□□□ -0.54
CHMP3-203ENST00000409225 TAS2R20P59543 309 aa11.7□□□□□ -0.54
CHMP3-203ENST00000409225 RRN3P1Q2M238 152 aa11.7□□□□□ -0.54
CHMP3-203ENST00000409225 OR1S2Q8NGQ3 325 aa11.7□□□□□ -0.54
CHMP3-203ENST00000409225 PDCD10Q9BUL8 212 aa11.7□□□□□ -0.54
CHMP3-203ENST00000409225 SAV1Q9H4B6 383 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-203ENST00000409225 VPS13BQ7Z7G8 4022 aa11.7□□□□□ -0.54
CHMP3-203ENST00000409225 FAT1Q14517 4588 aa11.69□□□□□ -0.54
CHMP3-203ENST00000409225 IGKV1-5P01602 117 aa11.69□□□□□ -0.54
CHMP3-203ENST00000409225 IGLC1P0CG04 106 aa11.69□□□□□ -0.54
CHMP3-203ENST00000409225 NAT1P18440 290 aa11.69□□□□□ -0.54
CHMP3-203ENST00000409225 HLA-DMAP28067 261 aa11.69□□□□□ -0.54
CHMP3-203ENST00000409225 OR10J1P30954 320 aa11.69□□□□□ -0.54
CHMP3-203ENST00000409225 CCL18P55774 89 aa11.69□□□□□ -0.54
CHMP3-203ENST00000409225 LPCAT3Q6P1A2 487 aa11.69□□□□□ -0.54
CHMP3-203ENST00000409225 FOXI2Q6ZQN5 318 aa11.69□□□□□ -0.54
CHMP3-203ENST00000409225 BLOC1S6Q9UL45 172 aa11.69□□□□□ -0.54
CHMP3-203ENST00000409225 LINC00588Q9Y4M8 146 aa11.69□□□□□ -0.54
CHMP3-203ENST00000409225 BUB3O43684 328 aa11.68□□□□□ -0.54
CHMP3-203ENST00000409225 RND2P52198 227 aa11.68□□□□□ -0.54
CHMP3-203ENST00000409225 AKR1C2P52895 323 aa11.68□□□□□ -0.54
CHMP3-203ENST00000409225 TSPAN5P62079 268 aa11.68□□□□□ -0.54
CHMP3-203ENST00000409225 MAGT1Q9H0U3 335 aa11.68□□□□□ -0.54
CHMP3-203ENST00000409225 F5H768 121 aa11.67□□□□□ -0.54
CHMP3-203ENST00000409225 GSTZ1O43708 216 aaPredicted RBP11.67□□□□□ -0.54
CHMP3-203ENST00000409225 ALDH3B2P48448 385 aa11.67□□□□□ -0.54
CHMP3-203ENST00000409225 RORCP51449 518 aa11.67□□□□□ -0.54
CHMP3-203ENST00000409225 YPEL3P61236 119 aaPredicted RBP11.67□□□□□ -0.54
CHMP3-203ENST00000409225 PSG9Q00887 426 aa11.67□□□□□ -0.54
CHMP3-203ENST00000409225 PRSS54Q6PEW0 395 aa11.67□□□□□ -0.54
CHMP3-203ENST00000409225 LYSMD2Q8IV50 215 aa11.67□□□□□ -0.54
CHMP3-203ENST00000409225 NRG4Q8WWG1 115 aa11.67□□□□□ -0.54
CHMP3-203ENST00000409225 CNBD2Q96M20 576 aa11.67□□□□□ -0.54
CHMP3-203ENST00000409225 WDR12Q9GZL7 423 aaKnown RBP11.67□□□□□ -0.54
CHMP3-203ENST00000409225 SCPEP1Q9HB40 452 aa11.67□□□□□ -0.54
CHMP3-203ENST00000409225 MYCBP2O75592 4640 aa11.67□□□□□ -0.54
CHMP3-203ENST00000409225 P0C879 139 aa11.66□□□□□ -0.54
CHMP3-203ENST00000409225 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
CHMP3-203ENST00000409225 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
CHMP3-203ENST00000409225 ZNF79Q15937 498 aa11.66□□□□□ -0.54
CHMP3-203ENST00000409225 BSXQ3C1V8 233 aa11.66□□□□□ -0.54
CHMP3-203ENST00000409225 COQ8AQ8NI60 647 aa11.66□□□□□ -0.54
CHMP3-203ENST00000409225 S100A16Q96FQ6 103 aaKnown RBP11.66□□□□□ -0.54
CHMP3-203ENST00000409225 CLUHP3Q96NS8 147 aa11.66□□□□□ -0.54
CHMP3-203ENST00000409225 TMEM208Q9BTX3 173 aa11.66□□□□□ -0.54
CHMP3-203ENST00000409225 F6UB75 175 aa11.65□□□□□ -0.54
CHMP3-203ENST00000409225 M0QYG6 137 aa11.65□□□□□ -0.54
CHMP3-203ENST00000409225 ID1P41134 155 aa11.65□□□□□ -0.54
CHMP3-203ENST00000409225 HSPA13P48723 471 aa11.65□□□□□ -0.54
CHMP3-203ENST00000409225 DLK1P80370 383 aa11.65□□□□□ -0.54
CHMP3-203ENST00000409225 CLINT1Q14677 625 aa11.65□□□□□ -0.54
CHMP3-203ENST00000409225 TMEM69Q5SWH9 247 aa11.65□□□□□ -0.54
CHMP3-203ENST00000409225 FAM78BQ5VT40 261 aa11.65□□□□□ -0.54
CHMP3-203ENST00000409225 SSX7Q7RTT5 188 aa11.65□□□□□ -0.54
CHMP3-203ENST00000409225 KRTAP1-5Q9BYS1 174 aa11.65□□□□□ -0.54
CHMP3-203ENST00000409225 LOC100506127A0A0U1RQW1 187 aa11.64□□□□□ -0.55
CHMP3-203ENST00000409225 LYRM9A8MSI8 78 aa11.64□□□□□ -0.55
CHMP3-203ENST00000409225 PRM2P04554 102 aa11.64□□□□□ -0.55
CHMP3-203ENST00000409225 RD3LP0DJH9 198 aa11.64□□□□□ -0.55
CHMP3-203ENST00000409225 SLC25A4P12235 298 aa11.64□□□□□ -0.55
CHMP3-203ENST00000409225 PSMB3P49720 205 aa11.64□□□□□ -0.55
CHMP3-203ENST00000409225 UCP3P55916 312 aa11.64□□□□□ -0.55
CHMP3-203ENST00000409225 EBLN2Q6P2I7 272 aa11.64□□□□□ -0.55
CHMP3-203ENST00000409225 OR51G1Q8NGK1 321 aa11.64□□□□□ -0.55
CHMP3-203ENST00000409225 Q9H8V8 135 aa11.64□□□□□ -0.55
CHMP3-203ENST00000409225 KLK11Q9UBX7 282 aa11.64□□□□□ -0.55
CHMP3-203ENST00000409225 ZNF705GA8MUZ8 300 aaPredicted RBP11.63□□□□□ -0.55
CHMP3-203ENST00000409225 TOMM40O96008 361 aa11.63□□□□□ -0.55
CHMP3-203ENST00000409225 PGAM2P15259 253 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms