RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SLC51BQ86UW2 128 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 COMMD7Q86VX2 200 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 LGI3Q8N145 548 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZFP62Q8NB50 900 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR1L1Q8NH94 360 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR2AE1Q8NHA4 323 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 UBALD1Q8TB05 177 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 FNDC9Q8TBE3 224 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 CASTOR1Q8WTX7 329 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 PPP1R1CQ8WVI7 109 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 BORCS8Q96FH0 119 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 FAAP24Q9BTP7 215 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 PDCD10Q9BUL8 212 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 GGTLC1Q9BX51 225 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 NMES1Q9C002 83 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 PRORYQ9H606 182 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 VAX2Q9UIW0 290 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 ANXA10Q9UJ72 324 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 TNFSF18Q9UNG2 199 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 TSSC4Q9Y5U2 329 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 SPAG17Q6Q759 2223 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 EYSQ5T1H1 3165 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 CEP290O15078 2479 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 HEATR5AQ86XA9 2040 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 GOLGA4Q13439 2230 aaKnown RBP3□□□□□ -1.93
HMGB3P18-201ENST00000406327 MYO9BQ13459 2157 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 CENPVL3A0A0U1RRI6 287 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 KANTRA0A1W2PQU2 76 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 PQLC2LA1A4F0 135 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF850A8MQ14 1090 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 H0YJW9 148 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 TNRC18O15417 2968 aaPredicted RBP3□□□□□ -1.93
HMGB3P18-201ENST00000406327 PDCD6O75340 191 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 FOXH1O75593 365 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 SCO1O75880 301 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 CRHP06850 196 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 CTSDP07339 412 aaPredicted RBP3□□□□□ -1.93
HMGB3P18-201ENST00000406327 SPTBP11277 2137 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 CD79AP11912 226 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 OPRK1P41145 380 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 UBA52P62987 128 aaKnown RBP3□□□□□ -1.93
HMGB3P18-201ENST00000406327 SUPT4H1P63272 117 aaKnown RBP3□□□□□ -1.93
HMGB3P18-201ENST00000406327 BAMBIQ13145 260 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 IL15RAQ13261 267 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 SLC9A3R2Q15599 337 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 TNXAQ16473 311 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 CEACAM21Q3KPI0 293 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 ELP2Q6IA86 826 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 DPPA2Q7Z7J5 298 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 PDZD9Q8IXQ8 264 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 OSR2Q8N2R0 312 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 C17orf78Q8N4C9 275 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 DRAM1Q8N682 238 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 MAFIPQ8WZ33 124 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 RBPMSQ93062 196 aaKnown RBP3□□□□□ -1.93
HMGB3P18-201ENST00000406327 APOBEC3DQ96AK3 386 aaPredicted RBP3□□□□□ -1.93
HMGB3P18-201ENST00000406327 C2orf50Q96LR7 162 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 DHRS9Q9BPW9 319 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 CMSS1Q9BQ75 279 aaKnown RBP3□□□□□ -1.93
HMGB3P18-201ENST00000406327 CHCHD7Q9BUK0 85 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 REG4Q9BYZ8 158 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF430Q9H8G1 570 aaPredicted RBP3□□□□□ -1.93
HMGB3P18-201ENST00000406327 NECAP2Q9NVZ3 263 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 AK3Q9UIJ7 227 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 C14orf166Q9Y224 244 aaKnown RBP3□□□□□ -1.93
HMGB3P18-201ENST00000406327 YTHDF2Q9Y5A9 579 aaKnown RBP3□□□□□ -1.93
HMGB3P18-201ENST00000406327 BRWD1Q9NSI6 2320 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 CPAMD8Q8IZJ3 1885 aa3□□□□□ -1.93
HMGB3P18-201ENST00000406327 KNL1Q8NG31 2342 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 TRGV5A0A0B4J1U4 118 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 IGHV3-72A0A0B4J1Y9 119 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 A0A1B0GW15 77 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 C5orf49A4QMS7 147 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 CRYM-AS1A6NIL9 109 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 ARGFXA6NJG6 315 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 CD300LBA8K4G0 201 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 I3L521 148 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 J3QT63 122 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 M0R1X1 148 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 GEMIN2O14893 280 aaKnown RBP2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 ADAP1O75689 374 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 CRYZL1O95825 349 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 RLN2P04090 185 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 M6PRP20645 277 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 OPRM1P35372 400 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 GALR1P47211 349 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 RBM11P57052 281 aaKnown RBP2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 ARPC4P59998 168 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 PRDX4Q13162 271 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 PIGYQ3MUY2 71 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 RNASE13Q5GAN3 156 aaKnown RBP2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 ACTL10Q5JWF8 245 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 Q5W150 140 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 PRSS54Q6PEW0 395 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 SLC25A26Q70HW3 274 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 SGPP2Q8IWX5 399 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 EIF4E3Q8N5X7 224 aaKnown RBP2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR5A2Q8NGI9 324 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR5L1Q8NGL2 311 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms