RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 C2orf70A6NJV1 201 aa13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 TAS2R45P59539 299 aa13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 RASL11AQ6T310 242 aa13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 ERASQ7Z444 233 aa13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 WFDC12Q8WWY7 111 aa13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 ZNF430Q9H8G1 570 aaPredicted RBP13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 SAP30LQ9HAJ7 183 aa13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 ZNRD1Q9P1U0 126 aa13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 A0A1W2PRE2 83 aa13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 J3QR06 171 aa13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 GPR6P46095 362 aaPredicted RBP13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 GDF5OSQ5U4N7 250 aa13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 LINC00479Q96M42 142 aa13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 MBD3L4A6NDZ8 208 aaPredicted RBP13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 MBD3L3A6NE82 208 aaPredicted RBP13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 MBD3L5A6NJ08 208 aaPredicted RBP13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 IGKV1-16P04430 117 aa13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 TIMM23BQ5SRD1 257 aa13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 MBD3L2Q8NHZ7 208 aaPredicted RBP13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 CCL13Q99616 98 aa13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 CEP250Q9BV73 2442 aa13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 ZFHX2Q9C0A1 2572 aaPredicted RBP13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 ARFGEF3Q5TH69 2177 aa13.49□□□□□ -0.25
PCDHA1-201ENST00000378133 SRRM4A7MD48 611 aaKnown RBP13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 KLF5Q13887 457 aaPredicted RBP13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 NUP35Q8NFH5 326 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 ST6GALNAC6Q969X2 333 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 SNRNP40Q96DI7 357 aaKnown RBP13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 RNF7Q9UBF6 113 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 MLANAQ16655 118 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 RTL8BQ17RB0 113 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 MPV17L2Q567V2 206 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 ASCL5Q7RTU5 278 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 KIR3DL3Q8N743 410 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 SSBP4Q9BWG4 385 aaPredicted RBP13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 ROS1P08922 2347 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 IGKV1OR2-108A0A075B7D4 117 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 FNDC10F2Z333 226 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 LRRC10Q5BKY1 277 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 SPATA12Q7Z6I5 190 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 FAM216BQ8N7L0 139 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 RAB9BQ9NP90 201 aa13.48□□□□□ -0.25
PCDHA1-201ENST00000378133 C8orf88P0DMB2 117 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 CAMPP49913 170 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 RIPPLY3P57055 190 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 ADTRPQ96IZ2 230 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 TMEM70Q9BUB7 260 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 CLEC5AQ9NY25 188 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 IGLV3-9A0A075B6K5 115 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 TM4SF5O14894 197 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 NBEAP1P0C6P0 100 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 CT45A6P0DMU7 189 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 CT45A5P0DMU8 189 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 CT45A7P0DMV0 189 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 TNFAIP6P98066 277 aaPredicted RBP13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 TMEM108Q6UXF1 575 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 FAM222BQ8WU58 562 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 TP73-AS1Q9UF72 201 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 PRNDQ9UKY0 176 aa13.47□□□□□ -0.25
PCDHA1-201ENST00000378133 MGAQ8IWI9 3026 aa13.46□□□□□ -0.25
PCDHA1-201ENST00000378133 C22orf34Q6ZV56 151 aa13.46□□□□□ -0.25
PCDHA1-201ENST00000378133 ZNF596Q8TC21 504 aa13.46□□□□□ -0.25
PCDHA1-201ENST00000378133 MBD6Q96DN6 1003 aa13.46□□□□□ -0.25
PCDHA1-201ENST00000378133 GRAMD2BQ96HH9 432 aa13.46□□□□□ -0.25
PCDHA1-201ENST00000378133 GAFA1Q96PS6 74 aa13.46□□□□□ -0.25
PCDHA1-201ENST00000378133 SLC25A33Q9BSK2 321 aa13.46□□□□□ -0.25
PCDHA1-201ENST00000378133 C19orf24Q9BVV8 132 aa13.46□□□□□ -0.25
PCDHA1-201ENST00000378133 WASHC3Q9Y3C0 194 aa13.46□□□□□ -0.25
PCDHA1-201ENST00000378133 RAI1Q7Z5J4 1906 aaPredicted RBP13.46□□□□□ -0.25
PCDHA1-201ENST00000378133 OR4C46A6NHA9 309 aa13.46□□□□□ -0.26
PCDHA1-201ENST00000378133 UPK2O00526 184 aa13.46□□□□□ -0.26
PCDHA1-201ENST00000378133 POU2AF1Q16633 256 aa13.46□□□□□ -0.26
PCDHA1-201ENST00000378133 RND1Q92730 232 aa13.46□□□□□ -0.26
PCDHA1-201ENST00000378133 TEX50A0A1B0GTY4 177 aa13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 IGHV1-46P01743 117 aa13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 GATA4P43694 442 aa13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 PRCDQ00LT1 54 aa13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 WFDC8Q8IUA0 241 aa13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 OR2T6Q8NHC8 308 aa13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 AMMECR1Q9Y4X0 333 aaPredicted RBP13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 FAM215AQ9Y5M1 114 aa13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 NUDT3O95989 172 aa13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 CA7P43166 264 aa13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 RHOGP84095 191 aa13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 PRR27Q6MZM9 219 aa13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 FAM231DQ6ZW35 169 aa13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 DYSFO75923 2080 aa13.45□□□□□ -0.26
PCDHA1-201ENST00000378133 TRAV5A0A0B4J249 113 aa13.44□□□□□ -0.26
PCDHA1-201ENST00000378133 UBE2L3P68036 154 aaKnown RBP13.44□□□□□ -0.26
PCDHA1-201ENST00000378133 ZADH2Q8N4Q0 377 aa13.44□□□□□ -0.26
PCDHA1-201ENST00000378133 OR10W1Q8NGF6 305 aa13.44□□□□□ -0.26
PCDHA1-201ENST00000378133 ZNF257Q9Y2Q1 563 aa13.44□□□□□ -0.26
PCDHA1-201ENST00000378133 HIGD1CA8MV81 97 aa13.44□□□□□ -0.26
PCDHA1-201ENST00000378133 TAX1BP3O14907 124 aa13.44□□□□□ -0.26
PCDHA1-201ENST00000378133 OR2J3O76001 311 aa13.44□□□□□ -0.26
PCDHA1-201ENST00000378133 OR9G1Q8NH87 305 aa13.44□□□□□ -0.26
PCDHA1-201ENST00000378133 ST20Q9HBF5 79 aa13.44□□□□□ -0.26
PCDHA1-201ENST00000378133 NDUFS8O00217 210 aa13.43□□□□□ -0.26
PCDHA1-201ENST00000378133 PSG1P11464 419 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms