RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 FAM209AQ5JX71 171 aa13.55□□□□□ -0.24
RGP1-201ENST00000378078 MBD3L2Q8NHZ7 208 aaPredicted RBP13.55□□□□□ -0.24
RGP1-201ENST00000378078 ZNF708P17019 499 aa13.55□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A10PA6NDY2 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A18PA6NE21 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A16PA6NEW6 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A20PA6NIJ5 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A8PA6NJQ4 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A7PA6NKC0 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A22PA8MWA6 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A12PA8MX19 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A5PA8MXJ8 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A23PA8MXZ1 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A15PP0C7V4 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A13PP0C7W8 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A14PP0C7W9 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A24PP0C7X0 464 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 C6orf226Q5I0X4 101 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 PI4KAP42356 2102 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 C1QTNF9P0C862 333 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 Q8TAT8 98 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 KNCNA6PVL3 124 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 TBX6O95947 436 aaPredicted RBP13.54□□□□□ -0.24
RGP1-201ENST00000378078 ZNF672Q499Z4 452 aaPredicted RBP13.54□□□□□ -0.24
RGP1-201ENST00000378078 MSRB2Q9Y3D2 182 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 ERCC8Q13216 396 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 FANCMQ8IYD8 2048 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 SSBP2P81877 361 aaPredicted RBP13.54□□□□□ -0.24
RGP1-201ENST00000378078 MORN2Q502X0 79 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 DLEC1Q9Y238 1755 aa13.54□□□□□ -0.24
RGP1-201ENST00000378078 IGKCP01834 107 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 COX5BP10606 129 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 ORAOV1Q8WV07 137 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 PSMG3Q9BT73 122 aaPredicted RBP13.53□□□□□ -0.24
RGP1-201ENST00000378078 CYSLTR1Q9Y271 337 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 PSME4Q14997 1843 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 SRRM4A7MD48 611 aaKnown RBP13.53□□□□□ -0.24
RGP1-201ENST00000378078 CFHR1Q03591 330 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 ANAPC10Q9UM13 185 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 PSG8Q9UQ74 426 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 PMS2P5A8MQ11 134 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 DPM2O94777 84 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 TMEM200BQ69YZ2 307 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 ITGB1BP1O14713 200 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 SP5Q6BEB4 398 aaPredicted RBP13.53□□□□□ -0.24
RGP1-201ENST00000378078 UNQ6494/PRO21346Q6UXR6 183 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 IQCF6A8MYZ5 107 aa13.53□□□□□ -0.24
RGP1-201ENST00000378078 SMKR1H3BMG3 65 aa13.52□□□□□ -0.24
RGP1-201ENST00000378078 UPK2O00526 184 aa13.52□□□□□ -0.24
RGP1-201ENST00000378078 PRB2P02812 416 aaPredicted RBP13.52□□□□□ -0.24
RGP1-201ENST00000378078 IGHV1-46P01743 117 aa13.52□□□□□ -0.24
RGP1-201ENST00000378078 ANAPC13Q9BS18 74 aa13.52□□□□□ -0.24
RGP1-201ENST00000378078 RBM38Q9H0Z9 239 aaKnown RBP13.52□□□□□ -0.24
RGP1-201ENST00000378078 ABCA7Q8IZY2 2146 aa13.52□□□□□ -0.25
RGP1-201ENST00000378078 FGFBP3Q8TAT2 258 aa13.52□□□□□ -0.25
RGP1-201ENST00000378078 XIRP1Q702N8 1843 aaKnown RBP13.52□□□□□ -0.25
RGP1-201ENST00000378078 IGHV2-26A0A0B4J1V2 119 aa13.52□□□□□ -0.25
RGP1-201ENST00000378078 A0A1W2PR77 199 aa13.52□□□□□ -0.25
RGP1-201ENST00000378078 C5orf24Q7Z6I8 188 aa13.52□□□□□ -0.25
RGP1-201ENST00000378078 TRAV25A0A0B4J276 109 aa13.52□□□□□ -0.25
RGP1-201ENST00000378078 NMBP08949 121 aa13.52□□□□□ -0.25
RGP1-201ENST00000378078 A0A087WV48 116 aa13.51□□□□□ -0.25
RGP1-201ENST00000378078 TRBV5-3A0A0A0MS03 114 aa13.51□□□□□ -0.25
RGP1-201ENST00000378078 SYNJ2BPP57105 145 aa13.51□□□□□ -0.25
RGP1-201ENST00000378078 RIPPLY2Q5TAB7 128 aa13.51□□□□□ -0.25
RGP1-201ENST00000378078 TPRP12270 2363 aaKnown RBP13.51□□□□□ -0.25
RGP1-201ENST00000378078 NIT1Q86X76 327 aa13.51□□□□□ -0.25
RGP1-201ENST00000378078 MCRIP2Q9BUT9 160 aaKnown RBP13.51□□□□□ -0.25
RGP1-201ENST00000378078 ZNF98A6NK75 572 aa13.51□□□□□ -0.25
RGP1-201ENST00000378078 PCP4P48539 62 aa13.51□□□□□ -0.25
RGP1-201ENST00000378078 TCF20Q9UGU0 1960 aaKnown RBP13.51□□□□□ -0.25
RGP1-201ENST00000378078 LTBP4Q8N2S1 1624 aa13.51□□□□□ -0.25
RGP1-201ENST00000378078 IGKV1D-13A0A0B4J2D9 117 aa13.51□□□□□ -0.25
RGP1-201ENST00000378078 IGKV1-13P0DP09 117 aa13.51□□□□□ -0.25
RGP1-201ENST00000378078 IFITM3Q01628 133 aa13.51□□□□□ -0.25
RGP1-201ENST00000378078 CIARTQ8N365 385 aaPredicted RBP13.51□□□□□ -0.25
RGP1-201ENST00000378078 SERF1AO75920 110 aa13.51□□□□□ -0.25
RGP1-201ENST00000378078 EPDR1Q9UM22 224 aa13.51□□□□□ -0.25
RGP1-201ENST00000378078 TRAV8-3A0A0A6YYJ7 113 aa13.5□□□□□ -0.25
RGP1-201ENST00000378078 GAGE2EQ4V326 116 aa13.5□□□□□ -0.25
RGP1-201ENST00000378078 RTBDNQ9BSG5 229 aaPredicted RBP13.5□□□□□ -0.25
RGP1-201ENST00000378078 GAGE2DQ9UEU5 116 aa13.5□□□□□ -0.25
RGP1-201ENST00000378078 PPP1R3EQ9H7J1 279 aa13.5□□□□□ -0.25
RGP1-201ENST00000378078 XCL2Q9UBD3 114 aa13.5□□□□□ -0.25
RGP1-201ENST00000378078 RBBP6Q7Z6E9 1792 aaKnown RBP13.5□□□□□ -0.25
RGP1-201ENST00000378078 SPSB3Q6PJ21 355 aa13.5□□□□□ -0.25
RGP1-201ENST00000378078 SPXQ9BT56 116 aa13.5□□□□□ -0.25
RGP1-201ENST00000378078 F5P12259 2224 aa13.5□□□□□ -0.25
RGP1-201ENST00000378078 CLPSL1A2RUU4 121 aa13.5□□□□□ -0.25
RGP1-201ENST00000378078 LYZL4Q96KX0 146 aa13.5□□□□□ -0.25
RGP1-201ENST00000378078 PTPRFP10586 1907 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 A8MXK9 166 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 SPATA31B1PQ5VZV4 182 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 A0A0G2JNJ9 132 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 GSN-AS1Q9NRJ2 163 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 Q9UFV3 132 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 DKK1O94907 266 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 C1orf100Q5SVJ3 147 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 IGLV2-23P01705 113 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 LINC00205P59089 165 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms