RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 WASHC3Q9Y3C0 194 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 INSIG2Q9Y5U4 225 aa10.47□□□□□ -0.73
USP11-204ENST00000377107 TMEM178BH3BS89 294 aa10.46□□□□□ -0.73
USP11-204ENST00000377107 BPIFB3P59826 476 aa10.46□□□□□ -0.73
USP11-204ENST00000377107 Q6ZWC4 215 aa10.46□□□□□ -0.73
USP11-204ENST00000377107 FAM169BQ8N8A8 192 aa10.46□□□□□ -0.73
USP11-204ENST00000377107 NDUFAF3Q9BU61 184 aa10.46□□□□□ -0.73
USP11-204ENST00000377107 HILPDAQ9Y5L2 63 aa10.46□□□□□ -0.73
USP11-204ENST00000377107 V9GYV3 84 aa10.46□□□□□ -0.73
USP11-204ENST00000377107 ISLRO14498 428 aa10.46□□□□□ -0.73
USP11-204ENST00000377107 CR1LQ2VPA4 569 aa10.46□□□□□ -0.73
USP11-204ENST00000377107 C2orf83Q53S99 150 aa10.46□□□□□ -0.73
USP11-204ENST00000377107 PDPNQ86YL7 162 aa10.46□□□□□ -0.73
USP11-204ENST00000377107 FBXL15Q9H469 300 aa10.46□□□□□ -0.73
USP11-204ENST00000377107 CTSZQ9UBR2 303 aa10.46□□□□□ -0.73
USP11-204ENST00000377107 RNASEKQ6P5S7 137 aaKnown RBP10.46□□□□□ -0.74
USP11-204ENST00000377107 LURAP1LQ8IV03 231 aa10.46□□□□□ -0.74
USP11-204ENST00000377107 RNASEH2CQ8TDP1 164 aaKnown RBP10.46□□□□□ -0.74
USP11-204ENST00000377107 FAM222BQ8WU58 562 aa10.46□□□□□ -0.74
USP11-204ENST00000377107 RNASE6Q93091 150 aaKnown RBP10.46□□□□□ -0.74
USP11-204ENST00000377107 NOL4LQ96MY1 436 aaPredicted RBP10.46□□□□□ -0.74
USP11-204ENST00000377107 ZNF586Q9NXT0 402 aa10.46□□□□□ -0.74
USP11-204ENST00000377107 BET1LQ9NYM9 111 aa10.46□□□□□ -0.74
USP11-204ENST00000377107 TBL2Q9Y4P3 447 aaKnown RBP10.46□□□□□ -0.74
USP11-204ENST00000377107 CORTO00230 105 aa10.45□□□□□ -0.74
USP11-204ENST00000377107 ZNF257Q9Y2Q1 563 aa10.45□□□□□ -0.74
USP11-204ENST00000377107 A0A1W2PN81 502 aa10.45□□□□□ -0.74
USP11-204ENST00000377107 TCAPO15273 167 aa10.45□□□□□ -0.74
USP11-204ENST00000377107 CEACAM8P31997 349 aaPredicted RBP10.45□□□□□ -0.74
USP11-204ENST00000377107 FOXA3P55318 350 aaPredicted RBP10.45□□□□□ -0.74
USP11-204ENST00000377107 COA6Q5JTJ3 125 aaKnown RBP10.45□□□□□ -0.74
USP11-204ENST00000377107 VSTM2AQ8TAG5 236 aa10.45□□□□□ -0.74
USP11-204ENST00000377107 RCHY1Q96PM5 261 aa10.45□□□□□ -0.74
USP11-204ENST00000377107 A0A1W2PPI3 338 aa10.45□□□□□ -0.74
USP11-204ENST00000377107 APCSP02743 223 aa10.45□□□□□ -0.74
USP11-204ENST00000377107 THBDP07204 575 aa10.45□□□□□ -0.74
USP11-204ENST00000377107 NDUFA4L2Q9NRX3 87 aa10.45□□□□□ -0.74
USP11-204ENST00000377107 DIRC3C9JPN6 131 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 RPL27AP46776 148 aaKnown RBP10.44□□□□□ -0.74
USP11-204ENST00000377107 RUSC1-AS1Q66K80 236 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 TCF24Q7RTU0 167 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 RPEQ96AT9 228 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 IGHV1-69-2A0A0G2JMI3 117 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 ZZEF1O43149 2961 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 HSBP1O75506 76 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 CEACAM4O75871 244 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 DAZAP1Q96EP5 407 aaKnown RBP10.44□□□□□ -0.74
USP11-204ENST00000377107 SLC25A2Q9BXI2 301 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 TRAV8-1A0A0A6YYK1 113 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 A6NNC1 897 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 BRS3P32247 399 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 AARDQ4LEZ3 155 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 BORCS7Q96B45 105 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 NGBQ9NPG2 151 aa10.44□□□□□ -0.74
USP11-204ENST00000377107 RAI1Q7Z5J4 1906 aaPredicted RBP10.43□□□□□ -0.74
USP11-204ENST00000377107 OR1L4Q8NGR5 311 aa10.43□□□□□ -0.74
USP11-204ENST00000377107 TP53TG3Q9ULZ0 132 aa10.43□□□□□ -0.74
USP11-204ENST00000377107 PTPRBP23467 1997 aa10.43□□□□□ -0.74
USP11-204ENST00000377107 E7EQL1 145 aa10.43□□□□□ -0.74
USP11-204ENST00000377107 PEX7O00628 323 aa10.43□□□□□ -0.74
USP11-204ENST00000377107 FCN3O75636 299 aa10.43□□□□□ -0.74
USP11-204ENST00000377107 PDLIM4P50479 330 aa10.43□□□□□ -0.74
USP11-204ENST00000377107 ARF6P62330 175 aa10.43□□□□□ -0.74
USP11-204ENST00000377107 IGFL3Q6UXB1 125 aa10.43□□□□□ -0.74
USP11-204ENST00000377107 TXN2Q99757 166 aa10.43□□□□□ -0.74
USP11-204ENST00000377107 IGHV3OR16-8A0A075B7F1 116 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 C9JCJ5 164 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 M0QZ24 198 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 M0R143 59 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 PPOXP50336 477 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 LCN12Q6JVE5 192 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 ZNF833PQ6ZTB9 187 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 OR5AN1Q8NGI8 311 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 TMEM186Q96B77 213 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 SNHG12Q9BXW3 62 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 IGHV3-35A0A0C4DH35 117 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.42□□□□□ -0.74
USP11-204ENST00000377107 CSN3P07498 182 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 LOXP28300 417 aaPredicted RBP10.42□□□□□ -0.74
USP11-204ENST00000377107 GRNP28799 593 aaKnown RBP10.42□□□□□ -0.74
USP11-204ENST00000377107 YPEL3P61236 119 aaPredicted RBP10.42□□□□□ -0.74
USP11-204ENST00000377107 PMCHL1Q16048 86 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 KLF17Q5JT82 389 aaPredicted RBP10.42□□□□□ -0.74
USP11-204ENST00000377107 PATE2Q6UY27 113 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 ITGB1BP1O14713 200 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 CD3EP07766 207 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 IGHV1-8P0DP01 117 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 ZNF25P17030 456 aaPredicted RBP10.42□□□□□ -0.74
USP11-204ENST00000377107 MEF2CQ06413 473 aaPredicted RBP10.42□□□□□ -0.74
USP11-204ENST00000377107 PNKDQ8N490 385 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 PGLYRP4Q96LB8 373 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 NRN1Q9NPD7 142 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 CDC42EP3Q9UKI2 254 aa10.42□□□□□ -0.74
USP11-204ENST00000377107 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.42□□□□□ -0.741e-7■■■■□ 25.8
USP11-204ENST00000377107 A0A1W2PRE2 83 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 TCRBV4S1A1TA0A5B7 111 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 HIGD1CA8MV81 97 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 NBEAP1P0C6P0 100 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 TAS2R60P59551 318 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 MMDQ15546 238 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms