RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 HBDP02042 147 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 DOCK7Q96N67 2140 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 IGHV3-23P01764 117 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 FAM27E3Q08E93 113 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 LDLRAD2Q5SZI1 272 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 HIST3H2BBQ8N257 126 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 OR5AN1Q8NGI8 311 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 ORAOV1Q8WV07 137 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 TMEM242Q9NWH2 141 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 DPM3Q9P2X0 92 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 ICE1Q9Y2F5 2266 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 DSPP15924 2871 aaKnown RBP10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 IGHV3-49A0A0A0MS15 119 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 IGHV3-66A0A0C4DH42 116 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 TMEM262E9PQX1 116 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 CD69Q07108 199 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 SPACA3Q8IXA5 215 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 CHODLQ9H9P2 273 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 S4R3C0 116 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 PTPRSQ13332 1948 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 DMRTA2Q96SC8 542 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 TRBV7-9A0A0J9YWB2 115 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 COX6B1P14854 86 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 CACNG7P62955 275 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 TRBV24-1A0A075B6N3 115 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 A0A1W2PRE2 83 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 Q0VFX4 171 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 FAM90A1Q86YD7 464 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 SLC25A28Q96A46 364 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 SIGMAR1Q99720 223 aa10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 MRPL20Q9BYC9 149 aaKnown RBP10.24□□□□□ -0.77
NPLOC4-202ENST00000374747 DPM2O94777 84 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 CD5P06127 495 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 CNTFRP26992 372 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 ZNF585BQ52M93 769 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 IGHV2OR16-5A0A0B4J2B6 119 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 IGKV1D-13A0A0B4J2D9 117 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 COLCA2A8K830 154 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 FOXH1O75593 365 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 IGKV1-13P0DP09 117 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 PAX1P15863 534 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 ID3Q02535 119 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 FAM216BQ8N7L0 139 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 RBMY1BA6NDE4 496 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 RBMY1EA6NEQ0 496 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 NAPSAO96009 420 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 RBMY1DP0C7P1 496 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 RBMY1A1P0DJD3 496 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 RBMY1CP0DJD4 496 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 GNG5P63218 68 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 SEC11AP67812 179 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 GGNQ86UU5 652 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 CHCHD1Q96BP2 118 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 KLHDC3Q9BQ90 382 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 ANAPC13Q9BS18 74 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 SPRR3Q9UBC9 169 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 PHF3Q92576 2039 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 FABP5P3A8MUU1 101 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 APOBEC3AP31941 199 aaPredicted RBP10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 NUTF2P61970 127 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 TEX38Q6PEX7 206 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 OR2K2Q8NGT1 345 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 COQ2Q96H96 371 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 RTN4RL2Q86UN3 420 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 OCC1Q8TAD7 63 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 PLPPR1Q8TBJ4 325 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 ASCL2Q99929 193 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 EPDR1Q9UM22 224 aa10.23□□□□□ -0.77
NPLOC4-202ENST00000374747 C15orf61A6NNL5 157 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 PRR32B1ATL7 298 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 TNFSF13O75888 250 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 IGKV1D-33P01593 117 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 IGKV1-33P01594 117 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 C1QL4Q86Z23 238 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 ZIC4Q8N9L1 334 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 ARPC1AQ92747 370 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 DCTN5Q9BTE1 182 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 ST20Q9HBF5 79 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 NXT2Q9NPJ8 142 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 LY6G6EA0A0G2JKS1 128 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 UPK2O00526 184 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 CCL1P22362 96 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 VKORC1Q9BQB6 163 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 U3KQA8 63 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 PPBPP02775 128 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 SAA1P0DJI8 122 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 WFDC1Q9HC57 220 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 LINC00312Q9Y6C7 94 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 AMBPP02760 352 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 RIPPLY3P57055 190 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 FAM89BQ8N5H3 189 aa10.22□□□□□ -0.77
NPLOC4-202ENST00000374747 HOXA3O43365 443 aaPredicted RBP10.21□□□□□ -0.77
NPLOC4-202ENST00000374747 HSD52Q0P140 79 aa10.21□□□□□ -0.77
NPLOC4-202ENST00000374747 CENPVQ7Z7K6 275 aaPredicted RBP10.21□□□□□ -0.77
NPLOC4-202ENST00000374747 PPP1R27Q86WC6 154 aa10.21□□□□□ -0.77
NPLOC4-202ENST00000374747 NUDT10Q8NFP7 164 aa10.21□□□□□ -0.77
NPLOC4-202ENST00000374747 A0A0G2JLM5 398 aa10.21□□□□□ -0.77
NPLOC4-202ENST00000374747 PSG7Q13046 419 aa10.21□□□□□ -0.77
NPLOC4-202ENST00000374747 LINC01560Q8TB33 94 aa10.21□□□□□ -0.77
NPLOC4-202ENST00000374747 GTF3AQ92664 365 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms