RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 IGHV3-74A0A0B4J1X5 117 aa13.95□□□□□ -0.18
TMEM53-201ENST00000372235 A0A0J9YWU9 116 aa13.95□□□□□ -0.18
TMEM53-201ENST00000372235 A0A1B0GU03 582 aa13.95□□□□□ -0.18
TMEM53-201ENST00000372235 DUXBA0A1W2PPF3 345 aa13.95□□□□□ -0.18
TMEM53-201ENST00000372235 HELTA6NFD8 242 aa13.95□□□□□ -0.18
TMEM53-201ENST00000372235 NPY1RP25929 384 aa13.95□□□□□ -0.18
TMEM53-201ENST00000372235 TMEM187Q14656 261 aa13.95□□□□□ -0.18
TMEM53-201ENST00000372235 SMCO1Q147U7 214 aa13.95□□□□□ -0.18
TMEM53-201ENST00000372235 NMSQ5H8A3 153 aa13.95□□□□□ -0.18
TMEM53-201ENST00000372235 PFDN2Q9UHV9 154 aa13.95□□□□□ -0.18
TMEM53-201ENST00000372235 CXorf65A6NEN9 183 aa13.94□□□□□ -0.18
TMEM53-201ENST00000372235 AKR1C4P17516 323 aa13.94□□□□□ -0.18
TMEM53-201ENST00000372235 TOMM5Q8N4H5 51 aa13.94□□□□□ -0.18
TMEM53-201ENST00000372235 RABAC1Q9UI14 185 aa13.94□□□□□ -0.18
TMEM53-201ENST00000372235 KLK5Q9Y337 293 aaPredicted RBP13.94□□□□□ -0.18
TMEM53-201ENST00000372235 IFNA10P01566 189 aa13.93□□□□□ -0.18
TMEM53-201ENST00000372235 IGKV1-17P01599 117 aa13.93□□□□□ -0.18
TMEM53-201ENST00000372235 APOHP02749 345 aaPredicted RBP13.93□□□□□ -0.18
TMEM53-201ENST00000372235 OR10J1P30954 320 aa13.93□□□□□ -0.18
TMEM53-201ENST00000372235 NUP62P37198 522 aaPredicted RBP13.93□□□□□ -0.18
TMEM53-201ENST00000372235 P2RY1P47900 373 aa13.93□□□□□ -0.18
TMEM53-201ENST00000372235 PRSS54Q6PEW0 395 aa13.93□□□□□ -0.18
TMEM53-201ENST00000372235 STHQ8IWL8 128 aa13.93□□□□□ -0.18
TMEM53-201ENST00000372235 SLC25A21Q9BQT8 299 aaPredicted RBP13.93□□□□□ -0.18
TMEM53-201ENST00000372235 HSPB7Q9UBY9 170 aa13.93□□□□□ -0.18
TMEM53-201ENST00000372235 HNRNPCP07910 306 aaKnown RBP eCLIP13.92□□□□□ -0.18
TMEM53-201ENST00000372235 IGLC1P0CG04 106 aa13.92□□□□□ -0.18
TMEM53-201ENST00000372235 RND2P52198 227 aa13.92□□□□□ -0.18
TMEM53-201ENST00000372235 MLANAQ16655 118 aa13.92□□□□□ -0.18
TMEM53-201ENST00000372235 TIGITQ495A1 244 aa13.92□□□□□ -0.18
TMEM53-201ENST00000372235 PYDC2Q56P42 97 aa13.92□□□□□ -0.18
TMEM53-201ENST00000372235 TMEM128Q5BJH2 165 aa13.92□□□□□ -0.18
TMEM53-201ENST00000372235 DTD1Q8TEA8 209 aa13.92□□□□□ -0.18
TMEM53-201ENST00000372235 RARRES2Q99969 163 aa13.92□□□□□ -0.18
TMEM53-201ENST00000372235 IGHV3-66A0A0C4DH42 116 aa13.91□□□□□ -0.18
TMEM53-201ENST00000372235 CCDC160A6NGH7 325 aa13.91□□□□□ -0.18
TMEM53-201ENST00000372235 FABP1P07148 127 aa13.91□□□□□ -0.18
TMEM53-201ENST00000372235 DEFB131AP59861 70 aa13.91□□□□□ -0.18
TMEM53-201ENST00000372235 STXBP6Q8NFX7 210 aa13.91□□□□□ -0.18
TMEM53-201ENST00000372235 MFFQ9GZY8 342 aa13.91□□□□□ -0.18
TMEM53-201ENST00000372235 MRPL36Q9P0J6 103 aaKnown RBP13.91□□□□□ -0.18
TMEM53-201ENST00000372235 RD3LP0DJH9 198 aa13.9□□□□□ -0.18
TMEM53-201ENST00000372235 MORN3Q6PF18 240 aaPredicted RBP13.9□□□□□ -0.18
TMEM53-201ENST00000372235 CEMP1Q6PRD7 247 aaPredicted RBP13.9□□□□□ -0.18
TMEM53-201ENST00000372235 LILRB2Q8N423 598 aa13.9□□□□□ -0.18
TMEM53-201ENST00000372235 OR1S1Q8NH92 325 aa13.9□□□□□ -0.18
TMEM53-201ENST00000372235 SEPSECSQ9HD40 501 aaKnown RBP13.9□□□□□ -0.18
TMEM53-201ENST00000372235 STARD9Q9P2P6 4700 aa13.9□□□□□ -0.18
TMEM53-201ENST00000372235 K7EQG2 157 aa13.89□□□□□ -0.19
TMEM53-201ENST00000372235 MED6O75586 246 aa13.89□□□□□ -0.19
TMEM53-201ENST00000372235 TOMM40O96008 361 aa13.89□□□□□ -0.19
TMEM53-201ENST00000372235 CA1P00915 261 aaPredicted RBP13.89□□□□□ -0.19
TMEM53-201ENST00000372235 IFNA4P05014 189 aa13.89□□□□□ -0.19
TMEM53-201ENST00000372235 SPP1P10451 314 aa13.89□□□□□ -0.19
TMEM53-201ENST00000372235 SLC25A6P12236 298 aa13.89□□□□□ -0.19
TMEM53-201ENST00000372235 GPX4P36969 197 aaPredicted RBP13.89□□□□□ -0.19
TMEM53-201ENST00000372235 SUPT4H1P63272 117 aaKnown RBP13.89□□□□□ -0.19
TMEM53-201ENST00000372235 RPP30P78346 268 aaKnown RBP13.89□□□□□ -0.19
TMEM53-201ENST00000372235 KLF9Q13886 244 aaPredicted RBP13.89□□□□□ -0.19
TMEM53-201ENST00000372235 LYZL2Q7Z4W2 148 aa13.89□□□□□ -0.19
TMEM53-201ENST00000372235 NPIPB3Q92617 1050 aa13.89□□□□□ -0.19
TMEM53-201ENST00000372235 C11orf68Q9H3H3 251 aaKnown RBP13.89□□□□□ -0.19
TMEM53-201ENST00000372235 U3KQE9 123 aa13.89□□□□□ -0.19
TMEM53-201ENST00000372235 CSMD3Q7Z407 3707 aa13.89□□□□□ -0.19
TMEM53-201ENST00000372235 TENM2Q9NT68 2774 aa13.89□□□□□ -0.19
TMEM53-201ENST00000372235 FAM90A26D6RGX4 464 aa13.88□□□□□ -0.19
TMEM53-201ENST00000372235 ZNF701M0R085 212 aaPredicted RBP13.88□□□□□ -0.19
TMEM53-201ENST00000372235 IL4P05112 153 aa13.88□□□□□ -0.19
TMEM53-201ENST00000372235 SNRPD3P62318 126 aaKnown RBP13.88□□□□□ -0.19
TMEM53-201ENST00000372235 RAB11AP62491 216 aa13.88□□□□□ -0.19
TMEM53-201ENST00000372235 PMS2P11Q13670 270 aa13.88□□□□□ -0.19
TMEM53-201ENST00000372235 SPANXN2Q5MJ10 180 aa13.88□□□□□ -0.19
TMEM53-201ENST00000372235 TMED4Q7Z7H5 227 aa13.88□□□□□ -0.19
TMEM53-201ENST00000372235 LRTM2Q8N967 370 aa13.88□□□□□ -0.19
TMEM53-201ENST00000372235 ZNF124Q15973 351 aa13.87□□□□□ -0.19
TMEM53-201ENST00000372235 LEMD1Q68G75 181 aa13.87□□□□□ -0.19
TMEM53-201ENST00000372235 C16orf54Q6UWD8 224 aa13.87□□□□□ -0.19
TMEM53-201ENST00000372235 OR51G1Q8NGK1 321 aa13.87□□□□□ -0.19
TMEM53-201ENST00000372235 OR11H2Q8NH07 326 aa13.87□□□□□ -0.19
TMEM53-201ENST00000372235 TRIM63Q969Q1 353 aa13.87□□□□□ -0.19
TMEM53-201ENST00000372235 ACY3Q96HD9 319 aa13.87□□□□□ -0.19
TMEM53-201ENST00000372235 SLC35E1Q96K37 410 aa13.87□□□□□ -0.19
TMEM53-201ENST00000372235 CIB3Q96Q77 187 aaPredicted RBP13.87□□□□□ -0.19
TMEM53-201ENST00000372235 RBKSQ9H477 322 aa13.87□□□□□ -0.19
TMEM53-201ENST00000372235 TMED3Q9Y3Q3 217 aa13.87□□□□□ -0.19
TMEM53-201ENST00000372235 RYR2Q92736 4967 aa13.87□□□□□ -0.19
TMEM53-201ENST00000372235 NXPH3O95157 252 aa13.86□□□□□ -0.19
TMEM53-201ENST00000372235 VAMP1P23763 118 aa13.86□□□□□ -0.19
TMEM53-201ENST00000372235 UBE2MP61081 183 aaKnown RBP13.86□□□□□ -0.19
TMEM53-201ENST00000372235 NUTF2P61970 127 aaKnown RBP13.86□□□□□ -0.19
TMEM53-201ENST00000372235 DHRS2Q13268 280 aa13.86□□□□□ -0.19
TMEM53-201ENST00000372235 RBMS2Q15434 407 aaKnown RBP13.86□□□□□ -0.19
TMEM53-201ENST00000372235 OR8G2PQ6IF36 304 aa13.86□□□□□ -0.19
TMEM53-201ENST00000372235 DCANP1Q8TF63 244 aa13.86□□□□□ -0.19
TMEM53-201ENST00000372235 S100A7P31151 101 aa13.85□□□□□ -0.19
TMEM53-201ENST00000372235 INPP1P49441 399 aa13.85□□□□□ -0.19
TMEM53-201ENST00000372235 TMEM170AQ8WVE7 144 aa13.85□□□□□ -0.19
TMEM53-201ENST00000372235 GLMPQ8WWB7 406 aa13.85□□□□□ -0.19
TMEM53-201ENST00000372235 V9GYH0 126 aa13.85□□□□□ -0.19
TMEM53-201ENST00000372235 DYNC2H1Q8NCM8 4307 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms