RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TRGV3P03979 118 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 TFF3Q07654 80 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 FER1L6-AS1Q8NA97 138 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 NPIPB3Q92617 1050 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 LINC00312Q9Y6C7 94 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 VWA8A3KMH1 1905 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 SCO2A0A1W2PP80 73 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 ICAM4Q14773 271 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 LINC00305Q7Z4B0 112 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 RAX2Q96IS3 184 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 SRSF3P84103 164 aaKnown RBP11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 C18orf12Q96KH6 178 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 CSTL1Q9H114 145 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 C12orf77C9JDV5 145 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 TNFSF13O75888 250 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 GGNQ86UU5 652 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 GPR82Q96P67 336 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 PPP1R27Q86WC6 154 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 CCDC88CQ9P219 2028 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 IGHV3OR16-12A0A075B7B8 117 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 IGKV3D-15A0A087WSY6 115 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 CGB1A6NKQ9 187 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 NPC2P61916 151 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 LY6G6FQ5SQ64 297 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 ZIC4Q8N9L1 334 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 CGAP01215 116 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 RPL23P62829 140 aaKnown RBP11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 ATP5L2Q7Z4Y8 100 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 ZNF525Q8N782 197 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 DAD1P61803 113 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 C2orf82Q6UX34 121 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 OR13A1Q8NGR1 328 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 LYPD6BQ8NI32 183 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 CKAP5Q14008 2032 aa11.11□□□□□ -0.63
RAPGEF1-201ENST00000372189 IZUMO1RA6ND01 250 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 FOXA3P55318 350 aaPredicted RBP11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 LRTM2Q8N967 370 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 ASCL2Q99929 193 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 K7ENP7 123 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 ATP5G3P48201 142 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 WBP1Q96G27 269 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 NPPCP23582 126 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 DDB2Q92466 427 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 TRBV20OR9-2A0A075B6H5 130 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 PEX7O00628 323 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 MPZP25189 248 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 ZNF585BQ52M93 769 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 Q6ZS92 163 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 METRNQ9UJH8 293 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 SPTSSBQ8NFR3 76 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 IFI27L2Q9H2X8 130 aa11.1□□□□□ -0.63
RAPGEF1-201ENST00000372189 PLXNA3P51805 1871 aa11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 A0A0G2JNJ9 132 aa11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 APOHP02749 345 aaPredicted RBP11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 C20orf204Q6ZNR8 217 aa11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 Q9UFV3 132 aa11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 OSR1Q8TAX0 266 aaPredicted RBP11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 FMC1Q96HJ9 113 aa11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 DOCK4Q8N1I0 1966 aa11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 PLA2G2CQ5R387 149 aa11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 KLK15Q9H2R5 256 aa11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 LYPD3O95274 346 aa11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 MOSP00540 346 aa11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 RPP21Q9H633 154 aaKnown RBP11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 NBL1P41271 181 aa11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 SYNJ2BPP57105 145 aa11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 KIR2DL4Q99706 377 aa11.09□□□□□ -0.63
RAPGEF1-201ENST00000372189 LYNX1G3V0Z9 82 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 CLPSP04118 112 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 LYNX1P0DP58 116 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 GLRX5Q86SX6 157 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 ZCCHC24Q8N2G6 241 aaKnown RBP11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 BAALCQ8WXS3 180 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 FBLN5Q9UBX5 448 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 PAPPA-AS1Q5QFB9 102 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 COLCA1Q6ZS62 124 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 SLC25A20O43772 301 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 SERF1AO75920 110 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 IGFBP2P18065 325 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 C1orf194Q5T5A4 169 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 SNRPD3P62318 126 aaKnown RBP11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 TMEM170BQ5T4T1 132 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 PEAR1Q5VY43 1037 aaPredicted RBP11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 PRSS33Q8NF86 280 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 TMEM243Q9BU79 118 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 NRN1Q9NPD7 142 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 J3QRE1 110 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 HIST1H2BKO60814 126 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 HIST1H2BJP06899 126 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 NBEAP1P0C6P0 100 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 HIST1H2BOP23527 126 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 HIST1H2BBP33778 126 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 HIST1H2BDP58876 126 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 HIST1H2BCP62807 126 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 HIST2H2BEQ16778 126 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 TCTEX1D4Q5JR98 221 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 HIST1H2BHQ93079 126 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms