RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 LOC105371267A0A1B0GV96 52 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 C7orf77A4D0Y5 90 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 RBMY1BA6NDE4 496 aaKnown RBP6.51□□□□□ -1.37
CD44-205ENST00000352818 RBMY1EA6NEQ0 496 aaKnown RBP6.51□□□□□ -1.37
CD44-205ENST00000352818 ZFP92A6NM28 416 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 H3BQ15 152 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 J3QLI3 93 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 NUPL2O15504 423 aaKnown RBP6.51□□□□□ -1.37
CD44-205ENST00000352818 ENSAO43768 121 aaKnown RBP6.51□□□□□ -1.37
CD44-205ENST00000352818 SLC25A17O43808 307 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 NDUFA7O95182 113 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 IGHV2-5P01817 119 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 RBMY1DP0C7P1 496 aaKnown RBP6.51□□□□□ -1.37
CD44-205ENST00000352818 STAG3L2P0CL84 134 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 STAG3L3P0CL85 134 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 FOLR2P14207 255 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 MYOD1P15172 320 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 CEACAM3P40198 252 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 FGF8P55075 233 aaPredicted RBP6.51□□□□□ -1.37
CD44-205ENST00000352818 B2MP61769 119 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 PRSS8Q16651 343 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 TMEM88Q6PEY1 159 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 SLC16A13Q7RTY0 426 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 STPG3Q8N7X2 389 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 OR4F5Q8NH21 305 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 RPEQ96AT9 228 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 NIPSNAP3BQ9BS92 247 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 HINT2Q9BX68 163 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 RPS10P5Q9NQ39 176 aa6.51□□□□□ -1.37
CD44-205ENST00000352818 A0A1W2PPV4 95 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 COLCA2A8K830 154 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 M0R036 132 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 LINC00869P0C866 280 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 ATF4P18848 351 aaPredicted RBP6.5□□□□□ -1.37
CD44-205ENST00000352818 COX7A1P24310 79 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 CD81P60033 236 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 RHOBP62745 196 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 WT1-ASQ06250 92 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 PSG5Q15238 335 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 MIC13Q5XKP0 118 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 HCP5Q6MZN7 132 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 CFHR4Q92496 578 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 TVP23CQ96ET8 276 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 RNF2Q99496 336 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 C7orf69Q9H7B7 122 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 SIRT7Q9NRC8 400 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 DPM3Q9P2X0 92 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 SLC45A2Q9UMX9 530 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 SIGLEC9Q9Y336 463 aa6.5□□□□□ -1.37
CD44-205ENST00000352818 MDFIC2A0A1B0GVS7 189 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 IGLC7A0M8Q6 106 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 CXorf65A6NEN9 183 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 F6UZH7 168 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 CORTO00230 105 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 PDE6DO43924 150 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 NDUFA3O95167 84 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 CXorf1O96002 111 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 MT-CO2P00403 227 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 CRYGCP07315 174 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 SNRNP70P08621 437 aaKnown RBP6.49□□□□□ -1.37
CD44-205ENST00000352818 OR5G3P0C626 314 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 HTR1DP28221 377 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 RPL27AP46776 148 aaKnown RBP6.49□□□□□ -1.37
CD44-205ENST00000352818 FLI1Q01543 452 aaPredicted RBP6.49□□□□□ -1.37
CD44-205ENST00000352818 GAMTQ14353 236 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 HNF4GQ14541 408 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 SSX2Q16385 188 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 RNF212Q495C1 297 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 MINOS1Q5TGZ0 78 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 ETFRF1Q6IPR1 90 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 CYP2G1PQ6ZSU1 146 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 MOB3BQ86TA1 216 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 THAP8Q8NA92 274 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 NPBQ8NG41 125 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 OR10W1Q8NGF6 305 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 LINC01006Q8NI28 216 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 YPEL4Q96NS1 127 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 SIRPDQ9H106 197 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 TPSG1Q9NRR2 321 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 TMEM242Q9NWH2 141 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 PRELID1Q9Y255 219 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 POLR3KQ9Y2Y1 108 aaPredicted RBP6.49□□□□□ -1.37
CD44-205ENST00000352818 RNF114Q9Y508 228 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 PUS1Q9Y606 427 aaKnown RBP eCLIP6.49□□□□□ -1.37
CD44-205ENST00000352818 MINOS1-NBL1R4GNA1 71 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 HERC1Q15751 4861 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 ARHGAP32A7KAX9 2087 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 UBR4Q5T4S7 5183 aa6.49□□□□□ -1.37
CD44-205ENST00000352818 IGKV1OR2-108A0A075B7D4 117 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 IGHV3-72A0A0B4J1Y9 119 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 IGHV2-70DA0A0C4DH43 119 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 WI2-2373I1.2A0A1W2PRP0 233 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 TEX22C9J3V5 150 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 E7EUB6 86 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 ACTL6BO94805 426 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 MT-ND4LP03901 98 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 FBP1P09467 338 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 ARF6P62330 175 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 GCSAMLQ5JQS6 135 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 C10orf55Q5SWW7 151 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms