RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 HELTA6NFD8 242 aa13.13□□□□□ -0.31
CKLF-202ENST00000345436 IFNA10P01566 189 aa13.13□□□□□ -0.31
CKLF-202ENST00000345436 NPY1RP25929 384 aa13.13□□□□□ -0.31
CKLF-202ENST00000345436 OR10J1P30954 320 aa13.13□□□□□ -0.31
CKLF-202ENST00000345436 S100A5P33763 92 aa13.13□□□□□ -0.31
CKLF-202ENST00000345436 YPEL3P61236 119 aaPredicted RBP13.13□□□□□ -0.31
CKLF-202ENST00000345436 MLANAQ16655 118 aa13.13□□□□□ -0.31
CKLF-202ENST00000345436 TMEM41BQ5BJD5 291 aa13.13□□□□□ -0.31
CKLF-202ENST00000345436 STHQ8IWL8 128 aa13.13□□□□□ -0.31
CKLF-202ENST00000345436 LHFPL5Q8TAF8 219 aa13.13□□□□□ -0.31
CKLF-202ENST00000345436 ZNF414Q96IQ9 312 aa13.13□□□□□ -0.31
CKLF-202ENST00000345436 RARRES2Q99969 163 aa13.13□□□□□ -0.31
CKLF-202ENST00000345436 SLIRPQ9GZT3 109 aaKnown RBP13.13□□□□□ -0.31
CKLF-202ENST00000345436 SHPKQ9UHJ6 478 aa13.13□□□□□ -0.31
CKLF-202ENST00000345436 H3BMQ9 156 aa13.12□□□□□ -0.31
CKLF-202ENST00000345436 APOHP02749 345 aaPredicted RBP13.12□□□□□ -0.31
CKLF-202ENST00000345436 P2RY1P47900 373 aa13.12□□□□□ -0.31
CKLF-202ENST00000345436 RND2P52198 227 aa13.12□□□□□ -0.31
CKLF-202ENST00000345436 DEFB131AP59861 70 aa13.12□□□□□ -0.31
CKLF-202ENST00000345436 PMS2P11Q13670 270 aa13.12□□□□□ -0.31
CKLF-202ENST00000345436 TMEM187Q14656 261 aa13.12□□□□□ -0.31
CKLF-202ENST00000345436 SMCO1Q147U7 214 aa13.12□□□□□ -0.31
CKLF-202ENST00000345436 TIGITQ495A1 244 aa13.12□□□□□ -0.31
CKLF-202ENST00000345436 PYDC2Q56P42 97 aa13.12□□□□□ -0.31
CKLF-202ENST00000345436 TOMM5Q8N4H5 51 aa13.12□□□□□ -0.31
CKLF-202ENST00000345436 STXBP6Q8NFX7 210 aa13.12□□□□□ -0.31
CKLF-202ENST00000345436 DEDD2Q8WXF8 326 aa13.12□□□□□ -0.31
CKLF-202ENST00000345436 CCDC160A6NGH7 325 aa13.11□□□□□ -0.31
CKLF-202ENST00000345436 IGKV1-17P01599 117 aa13.11□□□□□ -0.31
CKLF-202ENST00000345436 HNRNPCP07910 306 aaKnown RBP eCLIP13.11□□□□□ -0.312e-7■□□□□ 9.5
CKLF-202ENST00000345436 NUP62P37198 522 aaPredicted RBP13.11□□□□□ -0.31
CKLF-202ENST00000345436 NMSQ5H8A3 153 aa13.11□□□□□ -0.31
CKLF-202ENST00000345436 PRSS54Q6PEW0 395 aa13.11□□□□□ -0.31
CKLF-202ENST00000345436 CEMP1Q6PRD7 247 aaPredicted RBP13.11□□□□□ -0.31
CKLF-202ENST00000345436 SOSTQ9BQB4 213 aa13.11□□□□□ -0.31
CKLF-202ENST00000345436 MFFQ9GZY8 342 aa13.11□□□□□ -0.31
CKLF-202ENST00000345436 DUXBA0A1W2PPF3 345 aa13.1□□□□□ -0.31
CKLF-202ENST00000345436 CA1P00915 261 aaPredicted RBP13.1□□□□□ -0.31
CKLF-202ENST00000345436 FABP1P07148 127 aa13.1□□□□□ -0.31
CKLF-202ENST00000345436 RD3LP0DJH9 198 aa13.1□□□□□ -0.31
CKLF-202ENST00000345436 LILRB2Q8N423 598 aa13.1□□□□□ -0.31
CKLF-202ENST00000345436 OR1S1Q8NH92 325 aa13.1□□□□□ -0.31
CKLF-202ENST00000345436 DTD1Q8TEA8 209 aa13.1□□□□□ -0.31
CKLF-202ENST00000345436 MRPL36Q9P0J6 103 aaKnown RBP13.1□□□□□ -0.31
CKLF-202ENST00000345436 IFNA4P05014 189 aa13.09□□□□□ -0.31
CKLF-202ENST00000345436 IGLC1P0CG04 106 aa13.09□□□□□ -0.31
CKLF-202ENST00000345436 TMEM128Q5BJH2 165 aa13.09□□□□□ -0.31
CKLF-202ENST00000345436 MORN3Q6PF18 240 aaPredicted RBP13.09□□□□□ -0.31
CKLF-202ENST00000345436 CENPSQ8N2Z9 138 aa13.09□□□□□ -0.31
CKLF-202ENST00000345436 OR11H2Q8NH07 326 aa13.09□□□□□ -0.31
CKLF-202ENST00000345436 NPIPB3Q92617 1050 aa13.09□□□□□ -0.31
CKLF-202ENST00000345436 SLC25A21Q9BQT8 299 aaPredicted RBP13.09□□□□□ -0.31
CKLF-202ENST00000345436 HSPB7Q9UBY9 170 aa13.09□□□□□ -0.31
CKLF-202ENST00000345436 K7EQG2 157 aa13.08□□□□□ -0.32
CKLF-202ENST00000345436 SPP1P10451 314 aa13.08□□□□□ -0.32
CKLF-202ENST00000345436 GPX4P36969 197 aaPredicted RBP13.08□□□□□ -0.32
CKLF-202ENST00000345436 SNRPD3P62318 126 aaKnown RBP13.08□□□□□ -0.32
CKLF-202ENST00000345436 RPP30P78346 268 aaKnown RBP13.08□□□□□ -0.32
CKLF-202ENST00000345436 KLF9Q13886 244 aaPredicted RBP13.08□□□□□ -0.32
CKLF-202ENST00000345436 ZNF124Q15973 351 aa13.08□□□□□ -0.32
CKLF-202ENST00000345436 LEMD1Q68G75 181 aa13.08□□□□□ -0.32
CKLF-202ENST00000345436 LYZL2Q7Z4W2 148 aa13.08□□□□□ -0.32
CKLF-202ENST00000345436 TMED4Q7Z7H5 227 aa13.08□□□□□ -0.32
CKLF-202ENST00000345436 ACY3Q96HD9 319 aa13.08□□□□□ -0.32
CKLF-202ENST00000345436 MED6O75586 246 aa13.07□□□□□ -0.32
CKLF-202ENST00000345436 NXPH3O95157 252 aa13.07□□□□□ -0.32
CKLF-202ENST00000345436 TOMM40O96008 361 aa13.07□□□□□ -0.32
CKLF-202ENST00000345436 IL4P05112 153 aa13.07□□□□□ -0.32
CKLF-202ENST00000345436 RAB11AP62491 216 aa13.07□□□□□ -0.32
CKLF-202ENST00000345436 DHRS2Q13268 280 aa13.07□□□□□ -0.32
CKLF-202ENST00000345436 RBMS2Q15434 407 aaKnown RBP13.07□□□□□ -0.32
CKLF-202ENST00000345436 SLC35E1Q96K37 410 aa13.07□□□□□ -0.32
CKLF-202ENST00000345436 RBKSQ9H477 322 aa13.07□□□□□ -0.32
CKLF-202ENST00000345436 SEPSECSQ9HD40 501 aaKnown RBP13.07□□□□□ -0.32
CKLF-202ENST00000345436 CSMD3Q7Z407 3707 aa13.07□□□□□ -0.32
CKLF-202ENST00000345436 INPP1P49441 399 aa13.06□□□□□ -0.32
CKLF-202ENST00000345436 NUTF2P61970 127 aaKnown RBP13.06□□□□□ -0.32
CKLF-202ENST00000345436 C16orf54Q6UWD8 224 aa13.06□□□□□ -0.32
CKLF-202ENST00000345436 C11orf45Q8TAV5 145 aa13.06□□□□□ -0.32
CKLF-202ENST00000345436 C11orf68Q9H3H3 251 aaKnown RBP13.06□□□□□ -0.32
CKLF-202ENST00000345436 U3KQE9 123 aa13.06□□□□□ -0.32
CKLF-202ENST00000345436 ZFP92A6NM28 416 aa13.05□□□□□ -0.32
CKLF-202ENST00000345436 LY6G6CO95867 125 aa13.05□□□□□ -0.32
CKLF-202ENST00000345436 ZNF688P0C7X2 276 aa13.05□□□□□ -0.32
CKLF-202ENST00000345436 SLC25A6P12236 298 aa13.05□□□□□ -0.32
CKLF-202ENST00000345436 VAMP1P23763 118 aa13.05□□□□□ -0.32
CKLF-202ENST00000345436 SUPT4H1P63272 117 aaKnown RBP13.05□□□□□ -0.32
CKLF-202ENST00000345436 SPANXN2Q5MJ10 180 aa13.05□□□□□ -0.32
CKLF-202ENST00000345436 OR51G1Q8NGK1 321 aa13.05□□□□□ -0.32
CKLF-202ENST00000345436 PHLDA1Q8WV24 401 aaPredicted RBP13.05□□□□□ -0.32
CKLF-202ENST00000345436 CIB3Q96Q77 187 aaPredicted RBP13.05□□□□□ -0.32
CKLF-202ENST00000345436 DYNC2H1Q8NCM8 4307 aaKnown RBP13.05□□□□□ -0.32
CKLF-202ENST00000345436 STARD9Q9P2P6 4700 aa13.04□□□□□ -0.32
CKLF-202ENST00000345436 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
CKLF-202ENST00000345436 S100A7P31151 101 aa13.04□□□□□ -0.32
CKLF-202ENST00000345436 LINC00476Q8WZB0 136 aa13.04□□□□□ -0.32
CKLF-202ENST00000345436 PRR13Q9NZ81 148 aa13.04□□□□□ -0.32
CKLF-202ENST00000345436 TMED3Q9Y3Q3 217 aa13.04□□□□□ -0.32
CKLF-202ENST00000345436 SNRPGP15A8MWD9 76 aa13.03□□□□□ -0.32
CKLF-202ENST00000345436 ACTL10Q5JWF8 245 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms