RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 IGHV4-31P0DP07 118 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 LY6EQ16553 131 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 SOHLH1Q5JUK2 328 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 CBLN2Q8IUK8 224 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 MRPL41Q8IXM3 137 aaKnown RBP10.68□□□□□ -0.7
CDC42-202ENST00000344548 C5orf56Q8N8D9 126 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 CLRN3Q8NCR9 226 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 SRSF8Q9BRL6 282 aaKnown RBP10.68□□□□□ -0.7
CDC42-202ENST00000344548 TNFRSF19Q9NS68 423 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 G3V318 75 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 ATP6V0E1O15342 81 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 NPPCP23582 126 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 ATP5G3P48201 142 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 LOXL1Q08397 574 aaPredicted RBP10.68□□□□□ -0.7
CDC42-202ENST00000344548 PMS2P11Q13670 270 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 RASL11BQ9BPW5 248 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 SMDT1Q9H4I9 107 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 TMA7Q9Y2S6 64 aaKnown RBP10.68□□□□□ -0.7
CDC42-202ENST00000344548 PUS1Q9Y606 427 aaKnown RBP eCLIP10.68□□□□□ -0.7
CDC42-202ENST00000344548 UNC79Q9P2D8 2635 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 IGLV11-55A0A075B6I3 123 aa10.67□□□□□ -0.7
CDC42-202ENST00000344548 MEF2BQ02080 365 aaPredicted RBP10.67□□□□□ -0.7
CDC42-202ENST00000344548 CIARTQ8N365 385 aaPredicted RBP10.67□□□□□ -0.7
CDC42-202ENST00000344548 TTC9CQ8N5M4 171 aa10.67□□□□□ -0.7
CDC42-202ENST00000344548 OR51G1Q8NGK1 321 aa10.67□□□□□ -0.7
CDC42-202ENST00000344548 KCNIP2Q9NS61 270 aa10.67□□□□□ -0.7
CDC42-202ENST00000344548 H3BUX3 64 aa10.67□□□□□ -0.7
CDC42-202ENST00000344548 IGHV3-23P01764 117 aa10.67□□□□□ -0.7
CDC42-202ENST00000344548 IGLC1P0CG04 106 aa10.67□□□□□ -0.7
CDC42-202ENST00000344548 RHOBP62745 196 aa10.67□□□□□ -0.7
CDC42-202ENST00000344548 TMEM249Q2WGJ8 235 aa10.67□□□□□ -0.7
CDC42-202ENST00000344548 Q6ZS46 218 aa10.67□□□□□ -0.7
CDC42-202ENST00000344548 RBM14Q96PK6 669 aaKnown RBP10.67□□□□□ -0.7
CDC42-202ENST00000344548 C1RLQ9NZP8 487 aa10.67□□□□□ -0.7
CDC42-202ENST00000344548 LINC00527Q9UJ94 153 aa10.67□□□□□ -0.7
CDC42-202ENST00000344548 FUT9Q9Y231 359 aa10.67□□□□□ -0.7
CDC42-202ENST00000344548 FASNP49327 2511 aaKnown RBP10.66□□□□□ -0.7
CDC42-202ENST00000344548 HECTD1Q9ULT8 2610 aa10.66□□□□□ -0.7
CDC42-202ENST00000344548 NPIPB5A8MRT5 1133 aa10.66□□□□□ -0.7
CDC42-202ENST00000344548 F8W735 103 aaPredicted RBP10.66□□□□□ -0.7
CDC42-202ENST00000344548 NDUFB8O95169 186 aa10.66□□□□□ -0.7
CDC42-202ENST00000344548 IGKV1-17P01599 117 aa10.66□□□□□ -0.7
CDC42-202ENST00000344548 SNRPCP09234 159 aaKnown RBP10.66□□□□□ -0.7
CDC42-202ENST00000344548 OR5G3P0C626 314 aa10.66□□□□□ -0.7
CDC42-202ENST00000344548 ECSCRQ19T08 205 aa10.66□□□□□ -0.7
CDC42-202ENST00000344548 AWAT1Q58HT5 328 aa10.66□□□□□ -0.7
CDC42-202ENST00000344548 ETFRF1Q6IPR1 90 aa10.66□□□□□ -0.7
CDC42-202ENST00000344548 LRRC75A-AS1Q8N1F1 130 aa10.66□□□□□ -0.7
CDC42-202ENST00000344548 WFDC11Q8NEX6 87 aa10.66□□□□□ -0.7
CDC42-202ENST00000344548 OR4X1Q8NH49 305 aa10.66□□□□□ -0.7
CDC42-202ENST00000344548 FAM167A-AS1Q96KT0 104 aa10.66□□□□□ -0.7
CDC42-202ENST00000344548 YTHDF2Q9Y5A9 579 aaKnown RBP10.66□□□□□ -0.7
CDC42-202ENST00000344548 H3BQ15 152 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 CORTO00230 105 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 SNAPINO95295 136 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 OR10J4P0C629 311 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 GCHFRP30047 84 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 TIGITQ495A1 244 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 RBMS3Q6XE24 437 aaKnown RBP10.65□□□□□ -0.7
CDC42-202ENST00000344548 DNAJC4Q9NNZ3 241 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 OR2J3O76001 311 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 CXorf1O96002 111 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 ORM2P19652 201 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 PSMB3P49720 205 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 OR4F5Q8NH21 305 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 SGMS2Q8NHU3 365 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 OR4F4Q96R69 305 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 TRGV9Q99603 122 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 TMUB1Q9BVT8 246 aa10.65□□□□□ -0.7
CDC42-202ENST00000344548 PSG1P11464 419 aa10.64□□□□□ -0.71
CDC42-202ENST00000344548 SLC25A2Q9BXI2 301 aa10.64□□□□□ -0.71
CDC42-202ENST00000344548 FLNAP21333 2647 aaKnown RBP10.64□□□□□ -0.71
CDC42-202ENST00000344548 C7orf77A4D0Y5 90 aa10.64□□□□□ -0.71
CDC42-202ENST00000344548 C11orf94C9JXX5 98 aa10.64□□□□□ -0.71
CDC42-202ENST00000344548 M0R036 132 aa10.64□□□□□ -0.71
CDC42-202ENST00000344548 IFNA1P01562 189 aa10.64□□□□□ -0.71
CDC42-202ENST00000344548 GATA3P23771 443 aa10.64□□□□□ -0.71
CDC42-202ENST00000344548 BLCAPP62952 87 aa10.64□□□□□ -0.71
CDC42-202ENST00000344548 DEFB112Q30KQ8 113 aa10.64□□□□□ -0.71
CDC42-202ENST00000344548 CST9LP1Q5W188 147 aa10.64□□□□□ -0.71
CDC42-202ENST00000344548 UNQ5815/PRO19632Q6UWF5 114 aa10.64□□□□□ -0.71
CDC42-202ENST00000344548 OR1B1Q8NGR6 318 aa10.64□□□□□ -0.71
CDC42-202ENST00000344548 CLN5O75503 358 aa10.63□□□□□ -0.71
CDC42-202ENST00000344548 PYYP10082 97 aa10.63□□□□□ -0.71
CDC42-202ENST00000344548 LEMD1Q68G75 181 aa10.63□□□□□ -0.71
CDC42-202ENST00000344548 RPUSD4Q96CM3 377 aaKnown RBP10.63□□□□□ -0.71
CDC42-202ENST00000344548 MBD6Q96DN6 1003 aa10.63□□□□□ -0.71
CDC42-202ENST00000344548 DERL1Q9BUN8 251 aa10.63□□□□□ -0.71
CDC42-202ENST00000344548 MANBALQ9NQG1 85 aa10.63□□□□□ -0.71
CDC42-202ENST00000344548 ZNF355PQ9NSJ1 428 aa10.63□□□□□ -0.71
CDC42-202ENST00000344548 A6NDX4 124 aa10.63□□□□□ -0.71
CDC42-202ENST00000344548 COX7A2P2O60397 106 aa10.63□□□□□ -0.71
CDC42-202ENST00000344548 C10orf113Q5VZT2 155 aa10.63□□□□□ -0.71
CDC42-202ENST00000344548 LINC00305Q7Z4B0 112 aa10.63□□□□□ -0.71
CDC42-202ENST00000344548 RPS10P5Q9NQ39 176 aa10.63□□□□□ -0.71
CDC42-202ENST00000344548 MOB4Q9Y3A3 225 aa10.63□□□□□ -0.71
CDC42-202ENST00000344548 SONP18583 2426 aaKnown RBP10.63□□□□□ -0.71
CDC42-202ENST00000344548 ACANP16112 2415 aa10.62□□□□□ -0.71
CDC42-202ENST00000344548 OR7C2O60412 319 aa10.62□□□□□ -0.71
CDC42-202ENST00000344548 SELENOTP62341 195 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms