RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 FRMD6-AS1P0C7T7 363 aa14.46□□□□□ -0.09
SYNE4-202ENST00000340477 IGHV4-30-4P0DP06 118 aa14.46□□□□□ -0.09
SYNE4-202ENST00000340477 GPX4P36969 197 aaPredicted RBP14.46□□□□□ -0.09
SYNE4-202ENST00000340477 MLANAQ16655 118 aa14.46□□□□□ -0.09
SYNE4-202ENST00000340477 IAH1Q2TAA2 248 aaPredicted RBP14.46□□□□□ -0.09
SYNE4-202ENST00000340477 Q8N1Y9 231 aa14.46□□□□□ -0.09
SYNE4-202ENST00000340477 MRPL36Q9P0J6 103 aaKnown RBP14.46□□□□□ -0.09
SYNE4-202ENST00000340477 SMPXQ9UHP9 88 aa14.46□□□□□ -0.09
SYNE4-202ENST00000340477 ZNF785A8K8V0 405 aa14.45□□□□□ -0.1
SYNE4-202ENST00000340477 SCGB1D2O95969 90 aa14.45□□□□□ -0.1
SYNE4-202ENST00000340477 CD5P06127 495 aa14.45□□□□□ -0.1
SYNE4-202ENST00000340477 TIGITQ495A1 244 aa14.45□□□□□ -0.1
SYNE4-202ENST00000340477 Q8WTZ3 238 aa14.45□□□□□ -0.1
SYNE4-202ENST00000340477 METTL26Q96S19 204 aa14.45□□□□□ -0.1
SYNE4-202ENST00000340477 SPAG8Q99932 426 aaPredicted RBP14.45□□□□□ -0.1
SYNE4-202ENST00000340477 SEC22CQ9BRL7 303 aa14.45□□□□□ -0.1
SYNE4-202ENST00000340477 RHPN1-AS1Q9BWJ2 59 aa14.45□□□□□ -0.1
SYNE4-202ENST00000340477 STRAPQ9Y3F4 350 aaKnown RBP14.45□□□□□ -0.1
SYNE4-202ENST00000340477 FABP1P07148 127 aa14.44□□□□□ -0.1
SYNE4-202ENST00000340477 IGLC1P0CG04 106 aa14.44□□□□□ -0.1
SYNE4-202ENST00000340477 C12orf45Q8N5I9 185 aaPredicted RBP14.44□□□□□ -0.1
SYNE4-202ENST00000340477 OR4D5Q8NGN0 318 aa14.44□□□□□ -0.1
SYNE4-202ENST00000340477 NPIPB3Q92617 1050 aa14.44□□□□□ -0.1
SYNE4-202ENST00000340477 ZFAND3Q9H8U3 227 aa14.44□□□□□ -0.1
SYNE4-202ENST00000340477 GPN1Q9HCN4 374 aaPredicted RBP14.44□□□□□ -0.1
SYNE4-202ENST00000340477 GSKIPQ9P0R6 139 aa14.44□□□□□ -0.1
SYNE4-202ENST00000340477 IGHV3-49A0A0A0MS15 119 aa14.43□□□□□ -0.1
SYNE4-202ENST00000340477 A0A1W2PS18 150 aa14.43□□□□□ -0.1
SYNE4-202ENST00000340477 OR4C46A6NHA9 309 aa14.43□□□□□ -0.1
SYNE4-202ENST00000340477 MPTX1A8MV57 137 aa14.43□□□□□ -0.1
SYNE4-202ENST00000340477 FAM25EA8MYX2 175 aa14.43□□□□□ -0.1
SYNE4-202ENST00000340477 A8MZ25 164 aa14.43□□□□□ -0.1
SYNE4-202ENST00000340477 CHEK1O14757 476 aa14.43□□□□□ -0.1
SYNE4-202ENST00000340477 TSPAN4O14817 238 aa14.43□□□□□ -0.1
SYNE4-202ENST00000340477 SSSCA1O60232 199 aa14.43□□□□□ -0.1
SYNE4-202ENST00000340477 NPPCP23582 126 aa14.43□□□□□ -0.1
SYNE4-202ENST00000340477 YPEL3P61236 119 aaPredicted RBP14.43□□□□□ -0.1
SYNE4-202ENST00000340477 ID3Q02535 119 aa14.43□□□□□ -0.1
SYNE4-202ENST00000340477 SPANXN5Q5MJ07 72 aa14.43□□□□□ -0.1
SYNE4-202ENST00000340477 ZBTB8BQ8NAP8 495 aaPredicted RBP14.43□□□□□ -0.1
SYNE4-202ENST00000340477 ASCL2Q99929 193 aa14.43□□□□□ -0.1
SYNE4-202ENST00000340477 C5orf51A6NDU8 294 aa14.42□□□□□ -0.1
SYNE4-202ENST00000340477 ZFP92A6NM28 416 aa14.42□□□□□ -0.1
SYNE4-202ENST00000340477 OR11H12B2RN74 326 aa14.42□□□□□ -0.1
SYNE4-202ENST00000340477 H3BP45 60 aa14.42□□□□□ -0.1
SYNE4-202ENST00000340477 IGKV1-17P01599 117 aa14.42□□□□□ -0.1
SYNE4-202ENST00000340477 CD7P09564 240 aa14.42□□□□□ -0.1
SYNE4-202ENST00000340477 POLR2GP62487 172 aaKnown RBP eCLIP14.42□□□□□ -0.1
SYNE4-202ENST00000340477 GRAMD2BQ96HH9 432 aa14.42□□□□□ -0.1
SYNE4-202ENST00000340477 PSENENQ9NZ42 101 aa14.42□□□□□ -0.1
SYNE4-202ENST00000340477 IL5P05113 134 aa14.41□□□□□ -0.1
SYNE4-202ENST00000340477 PAFAH1B2P68402 229 aa14.41□□□□□ -0.1
SYNE4-202ENST00000340477 RAB40CQ96S21 281 aa14.41□□□□□ -0.1
SYNE4-202ENST00000340477 RNF2Q99496 336 aa14.41□□□□□ -0.1
SYNE4-202ENST00000340477 ZMAT4Q9H898 229 aa14.41□□□□□ -0.1
SYNE4-202ENST00000340477 IGHV3OR16-13A0A075B7E8 117 aa14.4□□□□□ -0.1
SYNE4-202ENST00000340477 IGHV3-74A0A0B4J1X5 117 aa14.4□□□□□ -0.1
SYNE4-202ENST00000340477 CCSO14618 274 aa14.4□□□□□ -0.1
SYNE4-202ENST00000340477 PRAF2O60831 178 aa14.4□□□□□ -0.1
SYNE4-202ENST00000340477 TOMM40O96008 361 aa14.4□□□□□ -0.1
SYNE4-202ENST00000340477 RD3LP0DJH9 198 aa14.4□□□□□ -0.1
SYNE4-202ENST00000340477 GAMTQ14353 236 aa14.4□□□□□ -0.1
SYNE4-202ENST00000340477 ZNF414Q96IQ9 312 aa14.4□□□□□ -0.1
SYNE4-202ENST00000340477 C19orf73Q9NVV2 129 aa14.4□□□□□ -0.1
SYNE4-202ENST00000340477 PFDN2Q9UHV9 154 aa14.4□□□□□ -0.1
SYNE4-202ENST00000340477 L7N2F9 121 aa14.39□□□□□ -0.11
SYNE4-202ENST00000340477 IL4P05112 153 aa14.39□□□□□ -0.11
SYNE4-202ENST00000340477 EIF2B2P49770 351 aaKnown RBP14.39□□□□□ -0.11
SYNE4-202ENST00000340477 RPL11P62913 178 aaKnown RBP14.39□□□□□ -0.11
SYNE4-202ENST00000340477 VAMP2P63027 116 aa14.39□□□□□ -0.11
SYNE4-202ENST00000340477 IFITM3Q01628 133 aa14.39□□□□□ -0.11
SYNE4-202ENST00000340477 GSG1LQ6UXU4 331 aa14.39□□□□□ -0.11
SYNE4-202ENST00000340477 TCF24Q7RTU0 167 aa14.39□□□□□ -0.11
SYNE4-202ENST00000340477 NRARPQ7Z6K4 114 aa14.39□□□□□ -0.11
SYNE4-202ENST00000340477 ST8SIA2Q92186 375 aa14.39□□□□□ -0.11
SYNE4-202ENST00000340477 SMIM8Q96KF7 97 aa14.39□□□□□ -0.11
SYNE4-202ENST00000340477 VSIRQ9H7M9 311 aa14.39□□□□□ -0.11
SYNE4-202ENST00000340477 SRD5A3Q9H8P0 318 aa14.39□□□□□ -0.11
SYNE4-202ENST00000340477 INMT-MINDY4F8WBC2 141 aa14.38□□□□□ -0.11
SYNE4-202ENST00000340477 HNRNPCP07910 306 aaKnown RBP eCLIP14.38□□□□□ -0.11
SYNE4-202ENST00000340477 NUP62P37198 522 aaPredicted RBP14.38□□□□□ -0.11
SYNE4-202ENST00000340477 AKR1C1Q04828 323 aa14.38□□□□□ -0.11
SYNE4-202ENST00000340477 SBSPONQ8IVN8 264 aa14.38□□□□□ -0.11
SYNE4-202ENST00000340477 DEFB125Q8N687 156 aa14.38□□□□□ -0.11
SYNE4-202ENST00000340477 OR51G1Q8NGK1 321 aa14.38□□□□□ -0.11
SYNE4-202ENST00000340477 U3KQK5 164 aa14.38□□□□□ -0.11
SYNE4-202ENST00000340477 IGKV3-7A0A075B6H7 116 aa14.37□□□□□ -0.11
SYNE4-202ENST00000340477 IGHV3-66A0A0C4DH42 116 aa14.37□□□□□ -0.11
SYNE4-202ENST00000340477 TSC22D2O75157 780 aa14.37□□□□□ -0.11
SYNE4-202ENST00000340477 PVALBP20472 110 aaPredicted RBP14.37□□□□□ -0.11
SYNE4-202ENST00000340477 CRYBB3P26998 211 aa14.37□□□□□ -0.11
SYNE4-202ENST00000340477 CMC4P56277 68 aaPredicted RBP14.37□□□□□ -0.11
SYNE4-202ENST00000340477 TAS2R30P59541 319 aa14.37□□□□□ -0.11
SYNE4-202ENST00000340477 OR8G2PQ6IF36 304 aa14.37□□□□□ -0.11
SYNE4-202ENST00000340477 C2orf50Q96LR7 162 aa14.37□□□□□ -0.11
SYNE4-202ENST00000340477 RABAC1Q9UI14 185 aa14.37□□□□□ -0.11
SYNE4-202ENST00000340477 SMCO3A2RU48 225 aa14.36□□□□□ -0.11
SYNE4-202ENST00000340477 SNRPGP15A8MWD9 76 aa14.36□□□□□ -0.11
SYNE4-202ENST00000340477 DNASE2O00115 360 aaPredicted RBP14.36□□□□□ -0.11
SYNE4-202ENST00000340477 MBPP02686 304 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms