RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 GAGE6Q13070 117 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 SIGLEC15Q6ZMC9 328 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 LHFPL1Q86WI0 220 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 EIF4EBP2Q13542 120 aaPredicted RBP4.61□□□□□ -1.67
PTPRB-202ENST00000334414 KLHDC3Q9BQ90 382 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 WDR83OSQ9Y284 106 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 PKIGQ9Y2B9 76 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 PDCD11Q14690 1871 aaKnown RBP4.61□□□□□ -1.67
PTPRB-202ENST00000334414 MRPL14Q6P1L8 145 aaKnown RBP4.61□□□□□ -1.67
PTPRB-202ENST00000334414 LILRA6Q6PI73 481 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 WIPF2Q8TF74 440 aaPredicted RBP4.61□□□□□ -1.67
PTPRB-202ENST00000334414 A0A1W2PPE3 182 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 AGFG2O95081 481 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 PMS2CLQ68D20 193 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 IL17RELQ6ZVW7 336 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 PLXNA1Q9UIW2 1896 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 SHISA9B4DS77 424 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 GREM1O60565 184 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 R3HDMLQ9H3Y0 253 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 NYNRINQ9P2P1 1898 aaKnown RBP4.61□□□□□ -1.67
PTPRB-202ENST00000334414 NUP35Q8NFH5 326 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 ZNF501Q96CX3 271 aaPredicted RBP4.6□□□□□ -1.67
PTPRB-202ENST00000334414 AMELYQ99218 206 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 ADAMTSL1Q8N6G6 1762 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 APELAP0DMC3 54 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 FAM231DQ6ZW35 169 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 KLF2Q9Y5W3 355 aaPredicted RBP4.6□□□□□ -1.67
PTPRB-202ENST00000334414 TGFAP01135 160 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 TFPI2P48307 235 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 OCC1Q8TAD7 63 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 FAM90A27PA6NNH2 459 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 ATOX1O00244 68 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 EREGO14944 169 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 LGALS9BQ3B8N2 356 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 RPL39P5Q59GN2 51 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 GFI1BQ5VTD9 330 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 LGALS9CQ6DKI2 356 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 SPSB3Q6PJ21 355 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 C9orf139Q6ZV77 190 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 IGLV3-32A0A0A0MS00 114 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 C9orf50Q5SZB4 431 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 IGKV1-8A0A0C4DH67 115 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 OOSP1A8MZH6 123 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 MORN2Q502X0 79 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 LINC00477Q96M19 166 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 A0A0J9YW62 118 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 CGB1A6NKQ9 187 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 TCRAP04437 139 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 TMEM14EPQ6UXP3 125 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 JPT2Q9H910 190 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 C17orf98A8MV24 154 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 PRSS46E5RG02 174 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 CEND1Q8N111 149 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 TTC3P53804 2025 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 C2CD4DB7Z1M9 353 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 C9orf172C9J069 976 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 AZU1P20160 251 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 PRADC1Q9BSG0 188 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 PSG8Q9UQ74 426 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 ITLN1Q8WWA0 313 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 CSTL1Q9H114 145 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 DPM3Q9P2X0 92 aa4.6□□□□□ -1.67
PTPRB-202ENST00000334414 FAM223BA6NKX1 122 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 IGLC2P0DOY2 106 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 IGLC3P0DOY3 106 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 PF4V1P10720 104 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 FOXG1P55316 489 aaPredicted RBP4.59□□□□□ -1.67
PTPRB-202ENST00000334414 FAM223AQ8IWN6 122 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 LY6G5BQ8NDX9 201 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 PRR7Q8TB68 274 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 FBXL7Q9UJT9 491 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 H3BMG7 143 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 HAX1O00165 279 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 WFDC3Q8IUB2 231 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 ST6GALNAC3Q8NDV1 305 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 SMIM27A0A1W2PRY6 76 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 H0YIZ8 118 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 CD7P09564 240 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 NEU4Q8WWR8 484 aaPredicted RBP4.59□□□□□ -1.67
PTPRB-202ENST00000334414 SPXQ9BT56 116 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 REPIN1Q9BWE0 567 aaKnown RBP4.59□□□□□ -1.67
PTPRB-202ENST00000334414 C9JAW5 83 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 PROB1E7EW31 1015 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 C5orf67F2Z3F1 127 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 TIMM23O14925 209 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 IGHV2-5P01817 119 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 SMIM10L1P0DMW3 83 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 GLRXP35754 106 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 TRPT1Q86TN4 253 aaKnown RBP4.59□□□□□ -1.67
PTPRB-202ENST00000334414 SMIM10Q96HG1 83 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 FAM60AQ9NP50 221 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 HRKO00198 91 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 PDLIM4P50479 330 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 CRIM1Q9NZV1 1036 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 PTPRFP10586 1907 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 ADARB2-AS1A8MUL3 147 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 Q6ZVH6 145 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 TMEM240Q5SV17 173 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 Q8N8P6 123 aa4.59□□□□□ -1.67
PTPRB-202ENST00000334414 FBXL15Q9H469 300 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms