RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 NDUFA6P56556 154 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 HIST1H2BDP58876 126 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 LINC00205P59089 165 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 HIST1H2BCP62807 126 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 RELBQ01201 579 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 PRSS8Q16651 343 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 HIST2H2BEQ16778 126 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 C5orf64Q2M2E5 130 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.56□□□□□ -1.2
C11orf54-201ENST00000331239 ZNF418Q8TF45 676 aaPredicted RBP7.56□□□□□ -1.2
C11orf54-201ENST00000331239 HIST1H2BHQ93079 126 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 HIST1H2BNQ99877 126 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 HIST1H2BMQ99879 126 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 GPR61Q9BZJ8 451 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 GSN-AS1Q9NRJ2 163 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 VPREB3Q9UKI3 123 aa7.56□□□□□ -1.2
C11orf54-201ENST00000331239 TRBV24-1A0A075B6N3 115 aa7.55□□□□□ -1.2
C11orf54-201ENST00000331239 C17orf112F2Z3M2 114 aa7.55□□□□□ -1.2
C11orf54-201ENST00000331239 TRGC2P03986 189 aa7.55□□□□□ -1.2
C11orf54-201ENST00000331239 SAA1P0DJI8 122 aaPredicted RBP7.55□□□□□ -1.2
C11orf54-201ENST00000331239 CRIP2P52943 208 aaPredicted RBP7.55□□□□□ -1.2
C11orf54-201ENST00000331239 HSPE1P61604 102 aaKnown RBP7.55□□□□□ -1.2
C11orf54-201ENST00000331239 RPL8P62917 257 aaKnown RBP7.55□□□□□ -1.2
C11orf54-201ENST00000331239 ADIRFQ15847 76 aa7.55□□□□□ -1.2
C11orf54-201ENST00000331239 ZNF562Q6V9R5 426 aa7.55□□□□□ -1.2
C11orf54-201ENST00000331239 PPP1R27Q86WC6 154 aa7.55□□□□□ -1.2
C11orf54-201ENST00000331239 QTRT1Q9BXR0 403 aaKnown RBP7.55□□□□□ -1.2
C11orf54-201ENST00000331239 OR51M1Q9H341 326 aa7.55□□□□□ -1.2
C11orf54-201ENST00000331239 SRRM4A7MD48 611 aaKnown RBP7.55□□□□□ -1.2
C11orf54-201ENST00000331239 C15orf62A8K5M9 175 aa7.55□□□□□ -1.2
C11orf54-201ENST00000331239 S100A2P29034 98 aa7.55□□□□□ -1.2
C11orf54-201ENST00000331239 HES1Q14469 280 aa7.55□□□□□ -1.2
C11orf54-201ENST00000331239 SAPCD1Q5SSQ6 148 aa7.55□□□□□ -1.2
C11orf54-201ENST00000331239 OR1L8Q8NGR8 309 aa7.55□□□□□ -1.2
C11orf54-201ENST00000331239 RAB24Q969Q5 203 aa7.55□□□□□ -1.2
C11orf54-201ENST00000331239 RPUSD4Q96CM3 377 aaKnown RBP7.55□□□□□ -1.2
C11orf54-201ENST00000331239 A0A1W2PN81 502 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 IFITM10A6NMD0 228 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 CRLF1O75462 422 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 BRI3O95415 125 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 OR9G9P0C7N8 305 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 MDKP21741 143 aaPredicted RBP7.54□□□□□ -1.2
C11orf54-201ENST00000331239 S100PP25815 95 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 CHRNA7P36544 502 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 PRB3Q04118 309 aaPredicted RBP7.54□□□□□ -1.2
C11orf54-201ENST00000331239 MMDQ15546 238 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 TMEM241Q24JQ0 296 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 RASL11BQ9BPW5 248 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 OTOGQ6ZRI0 2925 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 SEC14L6B5MCN3 397 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 H3BUX3 64 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 PPP1R2P9O14990 202 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 CDC34P49427 236 aaPredicted RBP7.54□□□□□ -1.2
C11orf54-201ENST00000331239 KLK9Q2XQG4 91 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 BSXQ3C1V8 233 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 ACOT6Q3I5F7 207 aaPredicted RBP7.54□□□□□ -1.2
C11orf54-201ENST00000331239 Q8N9W7 124 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 OR1L6Q8NGR2 347 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 OR4F5Q8NH21 305 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 OR4F4Q96R69 305 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 SLC25A33Q9BSK2 321 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 COMMD5Q9GZQ3 224 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 PARLQ9H300 379 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 GAR1Q9NY12 217 aaKnown RBP7.54□□□□□ -1.2
C11orf54-201ENST00000331239 KLK9Q9UKQ9 250 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 WDR83OSQ9Y284 106 aa7.54□□□□□ -1.2
C11orf54-201ENST00000331239 IGHV3OR16-10A0A075B7F0 116 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 ELOA3CA0A087WX78 387 aaPredicted RBP7.53□□□□□ -1.2
C11orf54-201ENST00000331239 ACTL6BO94805 426 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 RPL23P62829 140 aaKnown RBP7.53□□□□□ -1.2
C11orf54-201ENST00000331239 C5orf56Q8N8D9 126 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 GATAD1Q8WUU5 269 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 FRZBQ92765 325 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 GGACTQ9BVM4 153 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 CSPG4Q6UVK1 2322 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 MTORP42345 2549 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 IGHV3-72A0A0B4J1Y9 119 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 HSBP1L1C9JCN9 74 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 H7BYZ3 331 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 SLC25A17O43808 307 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 SOX15O60248 233 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 TRGC1P0CF51 173 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 PRCDQ00LT1 54 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 SSX9Q7RTT3 188 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 BCL6BQ8N143 479 aaPredicted RBP7.53□□□□□ -1.2
C11orf54-201ENST00000331239 Q8N2B8 174 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 ZNF48Q96MX3 618 aaPredicted RBP7.53□□□□□ -1.2
C11orf54-201ENST00000331239 NDUFA4L2Q9NRX3 87 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 OR51B2Q9Y5P1 312 aa7.53□□□□□ -1.2
C11orf54-201ENST00000331239 SMCO3A2RU48 225 aa7.52□□□□□ -1.21
C11orf54-201ENST00000331239 MPDU1O75352 247 aa7.52□□□□□ -1.21
C11orf54-201ENST00000331239 IFNA10P01566 189 aa7.52□□□□□ -1.21
C11orf54-201ENST00000331239 DEFA4P12838 97 aa7.52□□□□□ -1.21
C11orf54-201ENST00000331239 HILS1P60008 231 aa7.52□□□□□ -1.21
C11orf54-201ENST00000331239 HIST3H2BBQ8N257 126 aa7.52□□□□□ -1.21
C11orf54-201ENST00000331239 SIGLECL1Q8N7X8 197 aa7.52□□□□□ -1.21
C11orf54-201ENST00000331239 ZNF114Q8NC26 417 aa7.52□□□□□ -1.21
C11orf54-201ENST00000331239 NPFFR1Q9GZQ6 430 aa7.52□□□□□ -1.21
C11orf54-201ENST00000331239 ZNF430Q9H8G1 570 aaPredicted RBP7.52□□□□□ -1.21
C11orf54-201ENST00000331239 TMEM89A2RUT3 159 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms