RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 CD74P04233 296 aa12.65□□□□□ -0.38
EXOSC4-201ENST00000316052 TNFSF8P32971 234 aa12.65□□□□□ -0.38
EXOSC4-201ENST00000316052 TCTAP57738 103 aa12.65□□□□□ -0.38
EXOSC4-201ENST00000316052 ZFAND1Q8TCF1 268 aa12.65□□□□□ -0.38
EXOSC4-201ENST00000316052 MARCH1Q8TCQ1 289 aa12.65□□□□□ -0.38
EXOSC4-201ENST00000316052 RRNAD1Q96FB5 475 aaKnown RBP12.65□□□□□ -0.38
EXOSC4-201ENST00000316052 HRH4Q9H3N8 390 aa12.65□□□□□ -0.38
EXOSC4-201ENST00000316052 EXTL2Q9UBQ6 330 aa12.65□□□□□ -0.38
EXOSC4-201ENST00000316052 U3KQE9 123 aa12.65□□□□□ -0.38
EXOSC4-201ENST00000316052 X6R8D5 127 aa12.65□□□□□ -0.38
EXOSC4-201ENST00000316052 PKHD1P08F94 4074 aa12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 ELOA3CA0A087WX78 387 aaPredicted RBP12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 ZNF705EA8MWA4 302 aaPredicted RBP12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 TBPP20226 339 aa12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 HLA-DMBP28068 263 aa12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 SPCS3P61009 180 aa12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 SCGB2B2Q4G0G5 96 aa12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 AARDQ4LEZ3 155 aa12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 ACTL10Q5JWF8 245 aa12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 MORN3Q6PF18 240 aaPredicted RBP12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 CCDC71LQ8N9Z2 235 aa12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 TMEM229BQ8NBD8 167 aa12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 CSNK1G2-AS1Q8NCQ2 148 aa12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 LHFPL5Q8TAF8 219 aa12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 CLEC5AQ9NY25 188 aa12.64□□□□□ -0.39
EXOSC4-201ENST00000316052 RGS5O15539 181 aa12.63□□□□□ -0.39
EXOSC4-201ENST00000316052 CDS2O95674 445 aa12.63□□□□□ -0.39
EXOSC4-201ENST00000316052 IGLC1P0CG04 106 aa12.63□□□□□ -0.39
EXOSC4-201ENST00000316052 SPP1P10451 314 aa12.63□□□□□ -0.39
EXOSC4-201ENST00000316052 PRSS54Q6PEW0 395 aa12.63□□□□□ -0.39
EXOSC4-201ENST00000316052 RNASE11Q8TAA1 199 aaKnown RBP12.63□□□□□ -0.39
EXOSC4-201ENST00000316052 GLYATL2Q8WU03 294 aa12.63□□□□□ -0.39
EXOSC4-201ENST00000316052 RTBDNQ9BSG5 229 aaPredicted RBP12.63□□□□□ -0.39
EXOSC4-201ENST00000316052 CCDC32Q9BV29 185 aa12.63□□□□□ -0.39
EXOSC4-201ENST00000316052 TMEM222Q9H0R3 208 aa12.63□□□□□ -0.39
EXOSC4-201ENST00000316052 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.63□□□□□ -0.39
EXOSC4-201ENST00000316052 TRAV30A0A087WSZ9 112 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 C11orf94C9JXX5 98 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 RAB3DO95716 219 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 OR5AC1P0C628 307 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 MIFP14174 115 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 HTR2BP41595 481 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 DHRS2Q13268 280 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 TMEM41BQ5BJD5 291 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 FAAP20Q6NZ36 180 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 STEAP1BQ6NZ63 245 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 C16orf54Q6UWD8 224 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 Q6ZTC4 211 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 SELENOHQ8IZQ5 122 aaKnown RBP12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 OR52E5Q8NH55 327 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 TMEM170AQ8WVE7 144 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 GLMPQ8WWB7 406 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 GPR146Q96CH1 333 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 RAB40CQ96S21 281 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 MIXL1Q9H2W2 232 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 RABL2AQ9UBK7 228 aaPredicted RBP12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 RABL2BQ9UNT1 228 aa12.62□□□□□ -0.39
EXOSC4-201ENST00000316052 B3GALNT1O75752 331 aa12.61□□□□□ -0.39
EXOSC4-201ENST00000316052 RND2P52198 227 aa12.61□□□□□ -0.39
EXOSC4-201ENST00000316052 TAS2R19P59542 299 aa12.61□□□□□ -0.39
EXOSC4-201ENST00000316052 DHODHQ02127 395 aa12.61□□□□□ -0.39
EXOSC4-201ENST00000316052 FAM219AQ8IW50 185 aa12.61□□□□□ -0.39
EXOSC4-201ENST00000316052 NARS2Q96I59 477 aaKnown RBP12.61□□□□□ -0.39
EXOSC4-201ENST00000316052 SOSTQ9BQB4 213 aa12.61□□□□□ -0.39
EXOSC4-201ENST00000316052 HEYLQ9NQ87 328 aaPredicted RBP12.61□□□□□ -0.39
EXOSC4-201ENST00000316052 V9GYH0 126 aa12.61□□□□□ -0.39
EXOSC4-201ENST00000316052 PCLOQ9Y6V0 5065 aa12.61□□□□□ -0.39
EXOSC4-201ENST00000316052 TEX13DA0A0J9YY54 714 aaPredicted RBP12.6□□□□□ -0.39
EXOSC4-201ENST00000316052 RPS10-NUDT3A0A1W2PQS6 291 aa12.6□□□□□ -0.39
EXOSC4-201ENST00000316052 SCGB2A1O75556 95 aa12.6□□□□□ -0.39
EXOSC4-201ENST00000316052 NXPH3O95157 252 aa12.6□□□□□ -0.39
EXOSC4-201ENST00000316052 OR10J1P30954 320 aa12.6□□□□□ -0.39
EXOSC4-201ENST00000316052 YPEL3P61236 119 aaPredicted RBP12.6□□□□□ -0.39
EXOSC4-201ENST00000316052 C2orf83Q53S99 150 aa12.6□□□□□ -0.39
EXOSC4-201ENST00000316052 PSMG4Q5JS54 123 aa12.6□□□□□ -0.39
EXOSC4-201ENST00000316052 OR1S2Q8NGQ3 325 aa12.6□□□□□ -0.39
EXOSC4-201ENST00000316052 Q8WTZ3 238 aa12.6□□□□□ -0.39
EXOSC4-201ENST00000316052 CACNG5Q9UF02 275 aa12.6□□□□□ -0.39
EXOSC4-201ENST00000316052 TBC1D24Q9ULP9 559 aa12.6□□□□□ -0.39
EXOSC4-201ENST00000316052 HELTA6NFD8 242 aa12.59□□□□□ -0.39
EXOSC4-201ENST00000316052 UPK1BO75841 260 aa12.59□□□□□ -0.39
EXOSC4-201ENST00000316052 HNRNPCP07910 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
EXOSC4-201ENST00000316052 MEF2DQ14814 521 aa12.59□□□□□ -0.39
EXOSC4-201ENST00000316052 USF2Q15853 346 aaPredicted RBP12.59□□□□□ -0.39
EXOSC4-201ENST00000316052 RNASEH2CQ8TDP1 164 aaKnown RBP12.59□□□□□ -0.39
EXOSC4-201ENST00000316052 RBPMSQ93062 196 aaKnown RBP12.59□□□□□ -0.39
EXOSC4-201ENST00000316052 NAA60Q9H7X0 242 aa12.59□□□□□ -0.39
EXOSC4-201ENST00000316052 CELA1Q9UNI1 258 aa12.59□□□□□ -0.39
EXOSC4-201ENST00000316052 RYR1P21817 5038 aa12.59□□□□□ -0.39
EXOSC4-201ENST00000316052 DYNC1H1Q14204 4646 aaKnown RBP12.58□□□□□ -0.39
EXOSC4-201ENST00000316052 IGHV4-4A0A075B6R2 117 aa12.58□□□□□ -0.4
EXOSC4-201ENST00000316052 TRAV10A0A0B4J240 114 aa12.58□□□□□ -0.4
EXOSC4-201ENST00000316052 FABP12A6NFH5 140 aa12.58□□□□□ -0.4
EXOSC4-201ENST00000316052 GABARAPH6UMI1 98 aa12.58□□□□□ -0.4
EXOSC4-201ENST00000316052 SLC25A4P12235 298 aa12.58□□□□□ -0.4
EXOSC4-201ENST00000316052 C12orf74Q32Q52 190 aa12.58□□□□□ -0.4
EXOSC4-201ENST00000316052 TMEM268Q5VZI3 342 aa12.58□□□□□ -0.4
EXOSC4-201ENST00000316052 ZNF767PQ75MW2 155 aa12.58□□□□□ -0.4
EXOSC4-201ENST00000316052 SLC24A4Q8NFF2 622 aa12.58□□□□□ -0.4
EXOSC4-201ENST00000316052 C15orf40Q8WUR7 153 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms